Gene Symbol | TECPR1 |
Entrez Gene ID | 70381 |
Full Name | tectonin beta-propeller repeat containing 1 |
Synonyms | 2210010N04Rik,mKIAA1358 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
ORF » Species Summary » Mus musculus » TECPR1 cDNA ORF clone
Gene Symbol | TECPR1 |
Entrez Gene ID | 70381 |
Full Name | tectonin beta-propeller repeat containing 1 |
Synonyms | 2210010N04Rik,mKIAA1358 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_027410.2 | NP_081686.1 | tectonin beta-propeller repeat-containing protein 1 isoform 1 |
XM_006504864.3 | XP_006504927.1 | tectonin beta-propeller repeat-containing protein 1 isoform X1 |
XM_017321096.1 | XP_017176585.1 | tectonin beta-propeller repeat-containing protein 1 isoform X2 |
XM_006504864.4 | XP_006504927.1 | tectonin beta-propeller repeat-containing protein 1 isoform X1 |
NM_001356993.1 | NP_001343922.1 | tectonin beta-propeller repeat-containing protein 1 isoform 3 |
NM_001356992.1 | NP_001343921.1 | tectonin beta-propeller repeat-containing protein 1 isoform 2 |
NM_027410.1 | NP_081686.1 | tectonin beta-propeller repeat-containing protein 1 |
Canis lupus familiaris (dog) | TECPR1 | XP_546986.4 |
Bos taurus (cattle) | TECPR1 | XP_002698192.3 |
Mus musculus (house mouse) | Tecpr1 | NP_081686.1 |
Rattus norvegicus (Norway rat) | Tecpr1 | NP_001032268.1 |
Gallus gallus (chicken) | TECPR1 | XP_004945159.1 |
LOC706290 | XP_002808393.1 | |
Homo sapiens (human) | TECPR1 | NP_056210.1 |
Drosophila melanogaster (fruit fly) | Pex23 | NP_730508.1 |
Anopheles gambiae (African malaria mosquito) | GALE3 | XP_315024.4 |
Pan troglodytes (chimpanzee) | TECPR1 | XP_001135658.2 |
Danio rerio (zebrafish) | tecpr1a | XP_003199636.2 |
Xenopus tropicalis (tropical clawed frog) | tecpr1 | NP_001107288.1 |
A Tecpr1-dependent selective autophagy pathway targets bacterial pathogens.
Ogawa M, Yoshikawa Y, Kobayashi T, Mimuro H, Fukumatsu M, Kiga K, Piao Z, Ashida H, Yoshida M, Kakuta S, Koyama T, Goto Y, Nagatake T, Nagai S, Kiyono H, Kawalec M, Reichhart JM, Sasakawa C
Cell host & microbe9(5)376-89(2011 May)
Regulatory pathway analysis by high-throughput in situ hybridization.
Visel A, Carson J, Oldekamp J, Warnecke M, Jakubcakova V, Zhou X, Shaw CA, Alvarez-Bolado G, Eichele G
PLoS genetics3(10)1867-83(2007 Oct)
Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
Okazaki N, Kikuno R, Ohara R, Inamoto S, Hara Y, Nagase T, Ohara O, Koga H
DNA research : an international journal for rapid publication of reports on genes and genomes9(5)179-88(2002 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Although Tecpr1-deficient mice appear normal, Tecpr1-deficient mouse embryo fibroblasts were defective for selective autophagy and supported increased intracellular multiplication of Shigella.
Title: A Tecpr1-dependent selective autophagy pathway targets bacterial pathogens.
The following TECPR1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TECPR1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu81487 | |
Clone ID Related Accession (Same CDS sequence) | XM_017321096.1 , NM_001356992.1 | |
Accession Version | NM_001356992.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1929bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-07 | |
Organism | Mus musculus(house mouse) | |
Product | tectonin beta-propeller repeat-containing protein 1 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121845.3. On Oct 14, 2017 this sequence version replaced XM_017321096.1. Transcript Variant: This variant (2) uses an alternate splice junction compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660817.314236.1, SRR1660819.79352.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164138 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGCATGG AGGAGCCGTA CGGGGCAGAT GATCATCCTC TGTGGGCCTG GGTGTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001343921.1 |
CDS | 2142..4070 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001356992.1 |
1 | ATGGGCATGG AGGAGCCGTA CGGGGCAGAT GATCATCCTC TGTGGGCCTG GGTGTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83826 | |
Clone ID Related Accession (Same CDS sequence) | NM_001356993.1 | |
Accession Version | NM_001356993.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1914bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-07 | |
Organism | Mus musculus(house mouse) | |
Product | tectonin beta-propeller repeat-containing protein 1 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121845.3. Transcript Variant: This variant (3) uses two alternate splice junctions compared to variant 1. The resulting isoform (3) is shorter at the N-terminus and lacks an internal segment compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN01164138 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGCATGG AGGAGCCGTA CGGGGCAGAT GATCATCCTC TGTGGGCCTG GGTGTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001343922.1 |
CDS | 2142..4055 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001356993.1 |
1 | ATGGGCATGG AGGAGCCGTA CGGGGCAGAT GATCATCCTC TGTGGGCCTG GGTGTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu81487 | |
Clone ID Related Accession (Same CDS sequence) | XM_017321096.1 , NM_001356992.1 | |
Accession Version | XM_017321096.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1929bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | tectonin beta-propeller repeat-containing protein 1 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCATGG AGGAGCCGTA CGGGGCAGAT GATCATCCTC TGTGGGCCTG GGTGTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017176585.1 |
CDS | 2129..4057 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017321096.1 |
1 | ATGGGCATGG AGGAGCCGTA CGGGGCAGAT GATCATCCTC TGTGGGCCTG GGTGTCTGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36425 | |
Clone ID Related Accession (Same CDS sequence) | XM_006504864.3 , XM_006504864.4 | |
Accession Version | XM_006504864.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3108bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | tectonin beta-propeller repeat-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006504864.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGTCA GACTGGGGTG GACATACGCT ATGGACTTTC CTGCCACCTA CACTAGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504927.1 |
CDS | 474..3581 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006504864.4 |
1 | ATGGGAGTCA GACTGGGGTG GACATACGCT ATGGACTTTC CTGCCACCTA CACTAGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04172 | |
Clone ID Related Accession (Same CDS sequence) | NM_027410.2 , NM_027410.1 | |
Accession Version | NM_027410.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3501bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-06-07 | |
Organism | Mus musculus(house mouse) | |
Product | tectonin beta-propeller repeat-containing protein 1 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121845.3, BC046968.1, AK040462.1 and AW048569.1. On Oct 14, 2017 this sequence version replaced NM_027410.1. Transcript Variant: This variant (1) encodes the longest isoform (1). ##Evidence-Data-START## Transcript exon combination :: BC046968.1, SRR1660815.278048.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164138 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCCCACCT CCGTGCTGTG GGCGGTGGAC CTCTTTGGGA GAGTGTATAC CCTGTCCACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_081686.1 |
CDS | 132..3632 |
Translation |
Target ORF information:
Target ORF information:
|
NM_027410.2 |
1 | ATGCCCACCT CCGTGCTGTG GGCGGTGGAC CTCTTTGGGA GAGTGTATAC CCTGTCCACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04172 | |
Clone ID Related Accession (Same CDS sequence) | NM_027410.2 , NM_027410.1 | |
Accession Version | NM_027410.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3501bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-24 | |
Organism | Mus musculus(House mouse) | |
Product | tectonin beta-propeller repeat-containing protein 1 | |
Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC046968.1. On or before Jan 29, 2007 this sequence version replaced XM_925611.2, XM_925610.2, XM_925606.2, XM_925605.2, XM_925608.2, XM_899672.2, XM_149712.9, XM_899648.2, XM_899644.2, XM_899658.2, XM_983148.1. ##Evidence-Data-START## Transcript exon combination :: BC046968.1, SRR1660815.278048.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01164138 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCCACCT CCGTGCTGTG GGCGGTGGAC CTCTTTGGGA GAGTGTATAC CCTGTCCACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_081686.1 |
CDS | 95..3595 |
Translation |
Target ORF information:
Target ORF information:
|
NM_027410.1 |
1 | ATGCCCACCT CCGTGCTGTG GGCGGTGGAC CTCTTTGGGA GAGTGTATAC CCTGTCCACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu36425 | |
Clone ID Related Accession (Same CDS sequence) | XM_006504864.3 , XM_006504864.4 | |
Accession Version | XM_006504864.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3108bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | tectonin beta-propeller repeat-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006504864.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGTCA GACTGGGGTG GACATACGCT ATGGACTTTC CTGCCACCTA CACTAGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006504927.1 |
CDS | 473..3580 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006504864.3 |
1 | ATGGGAGTCA GACTGGGGTG GACATACGCT ATGGACTTTC CTGCCACCTA CACTAGAGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A Tecpr1-dependent selective autophagy pathway targets bacterial pathogens. |
Regulatory pathway analysis by high-throughput in situ hybridization. |
Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. |