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Stx18 cDNA ORF clone, Mus musculus(house mouse)

Summary

Gene Symbol Stx18
Entrez Gene ID 71116
Full Name syntaxin 18
Synonyms 1810035L21Rik,4933425D03Rik,AU041562
General protein information
Preferred Names

syntaxin 18

Names

syntaxin-18
Gene Type protein-coding
Organism Mus musculus(house mouse)
Genome

5

5|5 B3

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_026959.3 NP_081235.2 syntaxin-18 isoform 1
NM_001359398.1 NP_001346327.1 syntaxin-18 isoform 4
NM_001289535.1 NP_001276464.1 syntaxin-18 isoform 2
XM_006504111.3 XP_006504174.1 syntaxin-18 isoform X1
XM_006504112.3 XP_006504175.1 syntaxin-18 isoform X2
NM_001289536.1 NP_001276465.1 syntaxin-18 isoform 3

Pathways from BioSystems


Homologies


STX18 XP_001094903.1
Arabidopsis thaliana (thale cress) SYP81 NP_564597.1
Canis lupus familiaris (dog) STX18 XP_851021.1
Bos taurus (cattle) STX18 NP_001093189.1
Mus musculus (house mouse) Stx18 NP_081235.2
Danio rerio (zebrafish) stx18 NP_001019596.1
Xenopus tropicalis (tropical clawed frog) stx18 NP_001016709.1
Rattus norvegicus (Norway rat) Stx18 NP_001012151.1
Drosophila melanogaster (fruit fly) Syx18 NP_524485.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP011160 XP_309489.4
Homo sapiens (human) STX18 NP_058626.1
Pan troglodytes (chimpanzee) STX18 XP_001154387.1
Gallus gallus (chicken) STX18 NP_001239087.1
Oryza sativa (rice) Os04g0530400 NP_001053389.1

Gene Ontology


Bibliography

Related articles in PubMed

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Koscielny G, Yaikhom G, Iyer V, Meehan TF, Morgan H, Atienza-Herrero J, Blake A, Chen CK, Easty R, Di Fenza A, Fiegel T, Grifiths M, Horne A, Karp NA, Kurbatova N, Mason JC, Matthews P, Oakley DJ, Qazi A, Regnart J, Retha A, Santos LA, Sneddon DJ, Warren J, Westerberg H, Wilson RJ, Melvin DG, Smedley D, Brown SD, Flicek P, Skarnes WC, Mallon AM, Parkinson H
Nucleic acids research42(Database issue)D802-9(2014 Jan)

Sec22b is a negative regulator of phagocytosis in macrophages.
Hatsuzawa K, Hashimoto H, Hashimoto H, Arai S, Tamura T, Higa-Nishiyama A, Wada I
Molecular biology of the cell20(20)4435-43(2009 Oct)

Bovine papillomavirus type 1 infection is mediated by SNARE syntaxin 18.
Laniosz V, Nguyen KC, Meneses PI
Journal of virology81(14)7435-48(2007 Jul)

Involvement of syntaxin 18, an endoplasmic reticulum (ER)-localized SNARE protein, in ER-mediated phagocytosis.
Hatsuzawa K, Tamura T, Hashimoto H, Hashimoto H, Yokoya S, Miura M, Nagaya H, Wada I
Molecular biology of the cell17(9)3964-77(2006 Sep)

Physical mapping of the mouse tilted locus identifies an association between human deafness loci DFNA6/14 and vestibular system development.
Hurle B, Lane K, Kenney J, Tarantino LM, Bucan M, Brownstein BH, Ornitz DM
Genomics77(3)189-99(2001 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Stx18 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Stx18 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMu17056 NM_001289535.1
Latest version!		 Mus musculus syntaxin 18 (Stx18), transcript variant 2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OMu35194 NM_001359398.1
Latest version!		 Mus musculus syntaxin 18 (Stx18), transcript variant 4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OMu57950 NM_001289536.1
Latest version!		 Mus musculus syntaxin 18 (Stx18), transcript variant 3, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OMu58316 NM_026959.3
Latest version!		 Mus musculus syntaxin 18 (Stx18), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $237.30
$339.00
OMu35194 XM_006504111.3
Latest version!		 Mus musculus syntaxin 18 (Stx18), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00
OMu35195 XM_006504112.3
Latest version!		 Mus musculus syntaxin 18 (Stx18), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $139.30
$199.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OMu17056
Clone ID Related Accession (Same CDS sequence) NM_001289535.1
Accession Version NM_001289535.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 927bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-01-04
Organism Mus musculus(house mouse)
Product syntaxin-18 isoform 2
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY037320.1, AK007700.1, AK169273.1 and AC115931.7. On Jan 23, 2014 this sequence version replaced XM_006504110.1. Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK007700.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849375, SAMN00849380 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGCGGTGG ACATCACACT GCTCTTCCGG GCTAGCGTCA AGACAGTGAA GACGCGGAAT 
AAGGCTCTGG GAGTGGCCGT GGGTGGCGGG GCCGATGGCA GCCGGGACGA GCTGTTCCGC 
AGAAGCCCTC GGCCCAAGGG AGACTTCTCC AGCCGGGCCC GTGAAGTGAT TTCTCACATT 
GGGAAGCTGA GAGATTTTCT CCTGGAGCAC AGGAAGGAGT ATATTAATGC CTACAGCCAC 
ACCATGTCTG ACTATGGGAG GATGACAGAC ACAGAGCGAG ACCAGATAGA CCAGGATGCT 
CAGATATTCA TAAGGACCTG TTCAGAAGCA ATCCATCAAC TCAGAACAGA AGCCCACAAG 
GAGATACATT CCCAGCAAGT GAAGGAACAC AGGACTGCCG TTTTGGATTT CGTTGACGAT 
TACTTAAAAA GAGTGTGTAA GCTTTACTCT GAACAAAGAG CCATCCGAGT GAAGCGCGTG 
GTGGACAAGA AAAGACTATC TAAGCTGGAA CCTGAGCCAC ATACCAAGAG GAAAGACTCC 
ACATCTGAGA AAGCCCCTCA GAACGCTTCC CAGGACTCTG AAGGAAAGCC TGCTGCTGAG 
GAGCTGCCAG AAAAGCCTTT GGCTGAATCA CAGCCCGAAC TGGGAACCTG GGGCGATGGC 
AAGGGTGAAG ATGAGCTGTC TCCAGAAGAG ATACAGATGT TTGAACAAGA AAATCAGCGA 
CTCATTGGTG AAATGAACAG CTTGTTTGAC GAAGTGAGGC AAATCGAAGG GAAAGTCGTT 
GAAATTTCCA GACTCCAAGA GATATTCACC GAAAAGGTTT TGCAACAGGA AACTGAGATC 
GACAGCATTC ACCAGTTAGT CGTGGGGGCA ACTGAAAATA TTAAGGAAGG CAACGAAGAC 
ATCCGAGAGC TAGCCCACCA GGGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001276464.1
CDS103..1029
Misc Feature(1)52..54
Misc Feature(2)112..390
Misc Feature(3)835..1011
Misc Feature(4)order(838..840,844..849,853..870,874..882,886..891,895..903,907..912,916..924,928..933,937..954,958..975,979..996,1000..1008)
Misc Feature(5)928..930
Exon (1)1..270
Exon (2)271..338
Exon (3)339..454
Exon (4)455..532
Exon (5)533..599
Exon (6)600..712
Exon (7)713..801
Exon (8)802..860
Exon (9)861..930
Exon (10)931..1011
Exon (11)1012..2427
Translation

Target ORF information:

RefSeq Version NM_001289535.1
Organism Mus musculus(house mouse)
Definition Mus musculus syntaxin 18 (Stx18), transcript variant 2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001289535.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGCGGTGG ACATCACACT GCTCTTCCGG GCTAGCGTCA AGACAGTGAA GACGCGGAAT 
AAGGCTCTGG GAGTGGCCGT GGGTGGCGGG GCCGATGGCA GCCGGGACGA GCTGTTCCGC 
AGAAGCCCTC GGCCCAAGGG AGACTTCTCC AGCCGGGCCC GTGAAGTGAT TTCTCACATT 
GGGAAGCTGA GAGATTTTCT CCTGGAGCAC AGGAAGGAGT ATATTAATGC CTACAGCCAC 
ACCATGTCTG ACTATGGGAG GATGACAGAC ACAGAGCGAG ACCAGATAGA CCAGGATGCT 
CAGATATTCA TAAGGACCTG TTCAGAAGCA ATCCATCAAC TCAGAACAGA AGCCCACAAG 
GAGATACATT CCCAGCAAGT GAAGGAACAC AGGACTGCCG TTTTGGATTT CGTTGACGAT 
TACTTAAAAA GAGTGTGTAA GCTTTACTCT GAACAAAGAG CCATCCGAGT GAAGCGCGTG 
GTGGACAAGA AAAGACTATC TAAGCTGGAA CCTGAGCCAC ATACCAAGAG GAAAGACTCC 
ACATCTGAGA AAGCCCCTCA GAACGCTTCC CAGGACTCTG AAGGAAAGCC TGCTGCTGAG 
GAGCTGCCAG AAAAGCCTTT GGCTGAATCA CAGCCCGAAC TGGGAACCTG GGGCGATGGC 
AAGGGTGAAG ATGAGCTGTC TCCAGAAGAG ATACAGATGT TTGAACAAGA AAATCAGCGA 
CTCATTGGTG AAATGAACAG CTTGTTTGAC GAAGTGAGGC AAATCGAAGG GAAAGTCGTT 
GAAATTTCCA GACTCCAAGA GATATTCACC GAAAAGGTTT TGCAACAGGA AACTGAGATC 
GACAGCATTC ACCAGTTAGT CGTGGGGGCA ACTGAAAATA TTAAGGAAGG CAACGAAGAC 
ATCCGAGAGC TAGCCCACCA GGGCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu35194
Clone ID Related Accession (Same CDS sequence) NM_001359398.1 , XM_006504111.3
Accession Version NM_001359398.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 843bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-01-04
Organism Mus musculus(house mouse)
Product syntaxin-18 isoform 4
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121811.2 and AC115931.7. On Jan 4, 2018 this sequence version replaced XM_006504111.3. Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (4) has a shorter and distinct N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660817.207204.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCAGCCG GGACGAGCTG TTCCGCAGAA GCCCTCGGCC CAAGGGAGAC TTCTCCAGCC 
GGGCCCGTGA AGTGCCACAC CATGTCTGAC TATGGGAGGA TGACAGACAC AGAGCGAGAC 
CAGATAGACC AGGATGCTCA GATATTCATA AGGACCTGTT CAGAAGCAAT CCATCAACTC 
AGAACAGAAG CCCACAAGGA GATACATTCC CAGCAAGTGA AGGAACACAG GACTGCCGTT 
TTGGATTTCG TTGACGATTA CTTAAAAAGA GTGTGTAAGC TTTACTCTGA ACAAAGAGCC 
ATCCGAGTGA AGCGCGTGGT GGACAAGAAA AGACTATCTA AGCTGGAACC TGAGCCACAT 
ACCAAGAGGA AAGACTCCAC ATCTGAGAAA GCCCCTCAGA ACGCTTCCCA GGACTCTGAA 
GGAAAGCCTG CTGCTGAGGA GCTGCCAGAA AAGCCTTTGG CTGAATCACA GCCCGAACTG 
GGAACCTGGG GCGATGGCAA GGGTGAAGAT GAGCTGTCTC CAGAAGAGAT ACAGATGTTT 
GAACAAGAAA ATCAGCGACT CATTGGTGAA ATGAACAGCT TGTTTGACGA AGTGAGGCAA 
ATCGAAGGGA AAGTCGTTGA AATTTCCAGA CTCCAAGAGA TATTCACCGA AAAGGTTTTG 
CAACAGGAAA CTGAGATCGA CAGCATTCAC CAGTTAGTCG TGGGGGCAAC TGAAAATATT 
AAGGAAGGCA ACGAAGACAT CCGAGAGGCC ATCAAAAACA ATGCAGGTTT CCGAGTGTGG 
ATCCTCTTCT TCCTCGTGAT GTGTTCCTTT TCCTTGCTCT TCCTCGACTG GTATGACAGC 
TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001346327.1
CDS197..1039
Misc Feature(1)149..151
Translation

Target ORF information:

RefSeq Version NM_001359398.1
Organism Mus musculus(house mouse)
Definition Mus musculus syntaxin 18 (Stx18), transcript variant 4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001359398.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCAGCCG GGACGAGCTG TTCCGCAGAA GCCCTCGGCC CAAGGGAGAC TTCTCCAGCC 
GGGCCCGTGA AGTGCCACAC CATGTCTGAC TATGGGAGGA TGACAGACAC AGAGCGAGAC 
CAGATAGACC AGGATGCTCA GATATTCATA AGGACCTGTT CAGAAGCAAT CCATCAACTC 
AGAACAGAAG CCCACAAGGA GATACATTCC CAGCAAGTGA AGGAACACAG GACTGCCGTT 
TTGGATTTCG TTGACGATTA CTTAAAAAGA GTGTGTAAGC TTTACTCTGA ACAAAGAGCC 
ATCCGAGTGA AGCGCGTGGT GGACAAGAAA AGACTATCTA AGCTGGAACC TGAGCCACAT 
ACCAAGAGGA AAGACTCCAC ATCTGAGAAA GCCCCTCAGA ACGCTTCCCA GGACTCTGAA 
GGAAAGCCTG CTGCTGAGGA GCTGCCAGAA AAGCCTTTGG CTGAATCACA GCCCGAACTG 
GGAACCTGGG GCGATGGCAA GGGTGAAGAT GAGCTGTCTC CAGAAGAGAT ACAGATGTTT 
GAACAAGAAA ATCAGCGACT CATTGGTGAA ATGAACAGCT TGTTTGACGA AGTGAGGCAA 
ATCGAAGGGA AAGTCGTTGA AATTTCCAGA CTCCAAGAGA TATTCACCGA AAAGGTTTTG 
CAACAGGAAA CTGAGATCGA CAGCATTCAC CAGTTAGTCG TGGGGGCAAC TGAAAATATT 
AAGGAAGGCA ACGAAGACAT CCGAGAGGCC ATCAAAAACA ATGCAGGTTT CCGAGTGTGG 
ATCCTCTTCT TCCTCGTGAT GTGTTCCTTT TCCTTGCTCT TCCTCGACTG GTATGACAGC 
TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu57950
Clone ID Related Accession (Same CDS sequence) NM_001289536.1
Accession Version NM_001289536.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 927bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-01-04
Organism Mus musculus(house mouse)
Product syntaxin-18 isoform 3
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC121811.2 and AC115931.7. Transcript Variant: This variant (3) lacks an alternate in-frame exon, compared to variant 1. The encoded isoform (3) is shorter than isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC021362.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGCGGTGG ACATCACACT GCTCTTCCGG GCTAGCGTCA AGACAGTGAA GACGCGGAAT 
AAGGCTCTGG GAGTGGCCGT GGGTGGCGGG GCCGATGGCA GCCGGGACGA GCTGTTCCGC 
AGAAGCCCTC GGCCCAAGGG AGACTTCTCC AGCCGGGCCC GTGAAGTGAT TTCTCACATT 
GGGAAGCTGA GAGATTTTCT CCTGGAGCAC AGGAAGGAGT ATATTAATGC CTACAGCCAC 
ACCATGTCTG ACTATGGGAG GATGACAGAC ACAGAGCGAG ACCAGATAGA CCAGGATGCT 
CAGATATTCA TAAGGACCTG TTCAGAAGCA ATCCATCAAC TCAGAACAGA AGGAGTGTGT 
AAGCTTTACT CTGAACAAAG AGCCATCCGA GTGAAGCGCG TGGTGGACAA GAAAAGACTA 
TCTAAGCTGG AACCTGAGCC ACATACCAAG AGGAAAGACT CCACATCTGA GAAAGCCCCT 
CAGAACGCTT CCCAGGACTC TGAAGGAAAG CCTGCTGCTG AGGAGCTGCC AGAAAAGCCT 
TTGGCTGAAT CACAGCCCGA ACTGGGAACC TGGGGCGATG GCAAGGGTGA AGATGAGCTG 
TCTCCAGAAG AGATACAGAT GTTTGAACAA GAAAATCAGC GACTCATTGG TGAAATGAAC 
AGCTTGTTTG ACGAAGTGAG GCAAATCGAA GGGAAAGTCG TTGAAATTTC CAGACTCCAA 
GAGATATTCA CCGAAAAGGT TTTGCAACAG GAAACTGAGA TCGACAGCAT TCACCAGTTA 
GTCGTGGGGG CAACTGAAAA TATTAAGGAA GGCAACGAAG ACATCCGAGA GGCCATCAAA 
AACAATGCAG GTTTCCGAGT GTGGATCCTC TTCTTCCTCG TGATGTGTTC CTTTTCCTTG 
CTCTTCCTCG ACTGGTATGA CAGCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001276465.1
CDS103..1029
Misc Feature(1)52..54
Misc Feature(2)112..390
Misc Feature(3)757..933
Misc Feature(4)order(760..762,766..771,775..792,796..804,808..813,817..825,829..834,838..846,850..855,859..876,880..897,901..918,922..930)
Misc Feature(5)850..852
Exon (1)1..270
Exon (2)271..338
Exon (3)339..454
Exon (4)455..521
Exon (5)522..634
Exon (6)635..723
Exon (7)724..782
Exon (8)783..852
Exon (9)853..933
Exon (10)934..2441
Translation

Target ORF information:

RefSeq Version NM_001289536.1
Organism Mus musculus(house mouse)
Definition Mus musculus syntaxin 18 (Stx18), transcript variant 3, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001289536.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGCGGTGG ACATCACACT GCTCTTCCGG GCTAGCGTCA AGACAGTGAA GACGCGGAAT 
AAGGCTCTGG GAGTGGCCGT GGGTGGCGGG GCCGATGGCA GCCGGGACGA GCTGTTCCGC 
AGAAGCCCTC GGCCCAAGGG AGACTTCTCC AGCCGGGCCC GTGAAGTGAT TTCTCACATT 
GGGAAGCTGA GAGATTTTCT CCTGGAGCAC AGGAAGGAGT ATATTAATGC CTACAGCCAC 
ACCATGTCTG ACTATGGGAG GATGACAGAC ACAGAGCGAG ACCAGATAGA CCAGGATGCT 
CAGATATTCA TAAGGACCTG TTCAGAAGCA ATCCATCAAC TCAGAACAGA AGGAGTGTGT 
AAGCTTTACT CTGAACAAAG AGCCATCCGA GTGAAGCGCG TGGTGGACAA GAAAAGACTA 
TCTAAGCTGG AACCTGAGCC ACATACCAAG AGGAAAGACT CCACATCTGA GAAAGCCCCT 
CAGAACGCTT CCCAGGACTC TGAAGGAAAG CCTGCTGCTG AGGAGCTGCC AGAAAAGCCT 
TTGGCTGAAT CACAGCCCGA ACTGGGAACC TGGGGCGATG GCAAGGGTGA AGATGAGCTG 
TCTCCAGAAG AGATACAGAT GTTTGAACAA GAAAATCAGC GACTCATTGG TGAAATGAAC 
AGCTTGTTTG ACGAAGTGAG GCAAATCGAA GGGAAAGTCG TTGAAATTTC CAGACTCCAA 
GAGATATTCA CCGAAAAGGT TTTGCAACAG GAAACTGAGA TCGACAGCAT TCACCAGTTA 
GTCGTGGGGG CAACTGAAAA TATTAAGGAA GGCAACGAAG ACATCCGAGA GGCCATCAAA 
AACAATGCAG GTTTCCGAGT GTGGATCCTC TTCTTCCTCG TGATGTGTTC CTTTTCCTTG 
CTCTTCCTCG ACTGGTATGA CAGCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu58316
Clone ID Related Accession (Same CDS sequence) NM_026959.3
Accession Version NM_026959.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1005bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-01-04
Organism Mus musculus(house mouse)
Product syntaxin-18 isoform 1
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY037320.1, AK169273.1 and AC115931.7. On Jan 23, 2014 this sequence version replaced NM_026959.2. Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660815.14409.1, AK169273.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGGCGGTGG ACATCACACT GCTCTTCCGG GCTAGCGTCA AGACAGTGAA GACGCGGAAT 
AAGGCTCTGG GAGTGGCCGT GGGTGGCGGG GCCGATGGCA GCCGGGACGA GCTGTTCCGC 
AGAAGCCCTC GGCCCAAGGG AGACTTCTCC AGCCGGGCCC GTGAAGTGAT TTCTCACATT 
GGGAAGCTGA GAGATTTTCT CCTGGAGCAC AGGAAGGAGT ATATTAATGC CTACAGCCAC 
ACCATGTCTG ACTATGGGAG GATGACAGAC ACAGAGCGAG ACCAGATAGA CCAGGATGCT 
CAGATATTCA TAAGGACCTG TTCAGAAGCA ATCCATCAAC TCAGAACAGA AGCCCACAAG 
GAGATACATT CCCAGCAAGT GAAGGAACAC AGGACTGCCG TTTTGGATTT CGTTGACGAT 
TACTTAAAAA GAGTGTGTAA GCTTTACTCT GAACAAAGAG CCATCCGAGT GAAGCGCGTG 
GTGGACAAGA AAAGACTATC TAAGCTGGAA CCTGAGCCAC ATACCAAGAG GAAAGACTCC 
ACATCTGAGA AAGCCCCTCA GAACGCTTCC CAGGACTCTG AAGGAAAGCC TGCTGCTGAG 
GAGCTGCCAG AAAAGCCTTT GGCTGAATCA CAGCCCGAAC TGGGAACCTG GGGCGATGGC 
AAGGGTGAAG ATGAGCTGTC TCCAGAAGAG ATACAGATGT TTGAACAAGA AAATCAGCGA 
CTCATTGGTG AAATGAACAG CTTGTTTGAC GAAGTGAGGC AAATCGAAGG GAAAGTCGTT 
GAAATTTCCA GACTCCAAGA GATATTCACC GAAAAGGTTT TGCAACAGGA AACTGAGATC 
GACAGCATTC ACCAGTTAGT CGTGGGGGCA ACTGAAAATA TTAAGGAAGG CAACGAAGAC 
ATCCGAGAGG CCATCAAAAA CAATGCAGGT TTCCGAGTGT GGATCCTCTT CTTCCTCGTG 
ATGTGTTCCT TTTCCTTGCT CTTCCTCGAC TGGTATGACA GCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_081235.2
CDS103..1107
Misc Feature(1)52..54
Misc Feature(2)112..390
Misc Feature(3)835..1011
Misc Feature(4)order(838..840,844..849,853..870,874..882,886..891,895..903,907..912,916..924,928..933,937..954,958..975,979..996,1000..1008)
Misc Feature(5)928..930
Misc Feature(6)1027..1089
Exon (1)1..270
Exon (2)271..338
Exon (3)339..454
Exon (4)455..532
Exon (5)533..599
Exon (6)600..712
Exon (7)713..801
Exon (8)802..860
Exon (9)861..930
Exon (10)931..1011
Exon (11)1012..2519
Translation

Target ORF information:

RefSeq Version NM_026959.3
Organism Mus musculus(house mouse)
Definition Mus musculus syntaxin 18 (Stx18), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_026959.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGGCGGTGG ACATCACACT GCTCTTCCGG GCTAGCGTCA AGACAGTGAA GACGCGGAAT 
AAGGCTCTGG GAGTGGCCGT GGGTGGCGGG GCCGATGGCA GCCGGGACGA GCTGTTCCGC 
AGAAGCCCTC GGCCCAAGGG AGACTTCTCC AGCCGGGCCC GTGAAGTGAT TTCTCACATT 
GGGAAGCTGA GAGATTTTCT CCTGGAGCAC AGGAAGGAGT ATATTAATGC CTACAGCCAC 
ACCATGTCTG ACTATGGGAG GATGACAGAC ACAGAGCGAG ACCAGATAGA CCAGGATGCT 
CAGATATTCA TAAGGACCTG TTCAGAAGCA ATCCATCAAC TCAGAACAGA AGCCCACAAG 
GAGATACATT CCCAGCAAGT GAAGGAACAC AGGACTGCCG TTTTGGATTT CGTTGACGAT 
TACTTAAAAA GAGTGTGTAA GCTTTACTCT GAACAAAGAG CCATCCGAGT GAAGCGCGTG 
GTGGACAAGA AAAGACTATC TAAGCTGGAA CCTGAGCCAC ATACCAAGAG GAAAGACTCC 
ACATCTGAGA AAGCCCCTCA GAACGCTTCC CAGGACTCTG AAGGAAAGCC TGCTGCTGAG 
GAGCTGCCAG AAAAGCCTTT GGCTGAATCA CAGCCCGAAC TGGGAACCTG GGGCGATGGC 
AAGGGTGAAG ATGAGCTGTC TCCAGAAGAG ATACAGATGT TTGAACAAGA AAATCAGCGA 
CTCATTGGTG AAATGAACAG CTTGTTTGAC GAAGTGAGGC AAATCGAAGG GAAAGTCGTT 
GAAATTTCCA GACTCCAAGA GATATTCACC GAAAAGGTTT TGCAACAGGA AACTGAGATC 
GACAGCATTC ACCAGTTAGT CGTGGGGGCA ACTGAAAATA TTAAGGAAGG CAACGAAGAC 
ATCCGAGAGG CCATCAAAAA CAATGCAGGT TTCCGAGTGT GGATCCTCTT CTTCCTCGTG 
ATGTGTTCCT TTTCCTTGCT CTTCCTCGAC TGGTATGACA GCTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu35194
Clone ID Related Accession (Same CDS sequence) NM_001359398.1 , XM_006504111.3
Accession Version XM_006504111.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 843bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-22
Organism Mus musculus(House mouse)
Product syntaxin-18 isoform X1
Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006504111.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCAGCCG GGACGAGCTG TTCCGCAGAA GCCCTCGGCC CAAGGGAGAC TTCTCCAGCC 
GGGCCCGTGA AGTGCCACAC CATGTCTGAC TATGGGAGGA TGACAGACAC AGAGCGAGAC 
CAGATAGACC AGGATGCTCA GATATTCATA AGGACCTGTT CAGAAGCAAT CCATCAACTC 
AGAACAGAAG CCCACAAGGA GATACATTCC CAGCAAGTGA AGGAACACAG GACTGCCGTT 
TTGGATTTCG TTGACGATTA CTTAAAAAGA GTGTGTAAGC TTTACTCTGA ACAAAGAGCC 
ATCCGAGTGA AGCGCGTGGT GGACAAGAAA AGACTATCTA AGCTGGAACC TGAGCCACAT 
ACCAAGAGGA AAGACTCCAC ATCTGAGAAA GCCCCTCAGA ACGCTTCCCA GGACTCTGAA 
GGAAAGCCTG CTGCTGAGGA GCTGCCAGAA AAGCCTTTGG CTGAATCACA GCCCGAACTG 
GGAACCTGGG GCGATGGCAA GGGTGAAGAT GAGCTGTCTC CAGAAGAGAT ACAGATGTTT 
GAACAAGAAA ATCAGCGACT CATTGGTGAA ATGAACAGCT TGTTTGACGA AGTGAGGCAA 
ATCGAAGGGA AAGTCGTTGA AATTTCCAGA CTCCAAGAGA TATTCACCGA AAAGGTTTTG 
CAACAGGAAA CTGAGATCGA CAGCATTCAC CAGTTAGTCG TGGGGGCAAC TGAAAATATT 
AAGGAAGGCA ACGAAGACAT CCGAGAGGCC ATCAAAAACA ATGCAGGTTT CCGAGTGTGG 
ATCCTCTTCT TCCTCGTGAT GTGTTCCTTT TCCTTGCTCT TCCTCGACTG GTATGACAGC 
TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006504174.1
CDS795..1637
Misc Feature(1)1365..1541
Misc Feature(2)order(1368..1370,1374..1379,1383..1400,1404..1412,1416..1421,1425..1433,1437..1442,1446..1454,1458..1463,1467..1484,1488..1505,1509..1526,1530..1538)
Misc Feature(3)1458..1460
Translation

Target ORF information:

RefSeq Version XM_006504111.3
Organism Mus musculus(House mouse)
Definition Mus musculus syntaxin 18 (Stx18), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006504111.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCAGCCG GGACGAGCTG TTCCGCAGAA GCCCTCGGCC CAAGGGAGAC TTCTCCAGCC 
GGGCCCGTGA AGTGCCACAC CATGTCTGAC TATGGGAGGA TGACAGACAC AGAGCGAGAC 
CAGATAGACC AGGATGCTCA GATATTCATA AGGACCTGTT CAGAAGCAAT CCATCAACTC 
AGAACAGAAG CCCACAAGGA GATACATTCC CAGCAAGTGA AGGAACACAG GACTGCCGTT 
TTGGATTTCG TTGACGATTA CTTAAAAAGA GTGTGTAAGC TTTACTCTGA ACAAAGAGCC 
ATCCGAGTGA AGCGCGTGGT GGACAAGAAA AGACTATCTA AGCTGGAACC TGAGCCACAT 
ACCAAGAGGA AAGACTCCAC ATCTGAGAAA GCCCCTCAGA ACGCTTCCCA GGACTCTGAA 
GGAAAGCCTG CTGCTGAGGA GCTGCCAGAA AAGCCTTTGG CTGAATCACA GCCCGAACTG 
GGAACCTGGG GCGATGGCAA GGGTGAAGAT GAGCTGTCTC CAGAAGAGAT ACAGATGTTT 
GAACAAGAAA ATCAGCGACT CATTGGTGAA ATGAACAGCT TGTTTGACGA AGTGAGGCAA 
ATCGAAGGGA AAGTCGTTGA AATTTCCAGA CTCCAAGAGA TATTCACCGA AAAGGTTTTG 
CAACAGGAAA CTGAGATCGA CAGCATTCAC CAGTTAGTCG TGGGGGCAAC TGAAAATATT 
AAGGAAGGCA ACGAAGACAT CCGAGAGGCC ATCAAAAACA ATGCAGGTTT CCGAGTGTGG 
ATCCTCTTCT TCCTCGTGAT GTGTTCCTTT TCCTTGCTCT TCCTCGACTG GTATGACAGC 
TAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu35195
Clone ID Related Accession (Same CDS sequence) XM_006504112.3
Accession Version XM_006504112.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 762bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-22
Organism Mus musculus(house mouse)
Product syntaxin-18 isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006504112.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCTGACT ATGGGAGGAT GACAGACACA GAGCGAGACC AGATAGACCA GGATGCTCAG 
ATATTCATAA GGACCTGTTC AGAAGCAATC CATCAACTCA GAACAGAAGC CCACAAGGAG 
ATACATTCCC AGCAAGTGAA GGAACACAGG ACTGCCGTTT TGGATTTCGT TGACGATTAC 
TTAAAAAGAG TGTGTAAGCT TTACTCTGAA CAAAGAGCCA TCCGAGTGAA GCGCGTGGTG 
GACAAGAAAA GACTATCTAA GCTGGAACCT GAGCCACATA CCAAGAGGAA AGACTCCACA 
TCTGAGAAAG CCCCTCAGAA CGCTTCCCAG GACTCTGAAG GAAAGCCTGC TGCTGAGGAG 
CTGCCAGAAA AGCCTTTGGC TGAATCACAG CCCGAACTGG GAACCTGGGG CGATGGCAAG 
GGTGAAGATG AGCTGTCTCC AGAAGAGATA CAGATGTTTG AACAAGAAAA TCAGCGACTC 
ATTGGTGAAA TGAACAGCTT GTTTGACGAA GTGAGGCAAA TCGAAGGGAA AGTCGTTGAA 
ATTTCCAGAC TCCAAGAGAT ATTCACCGAA AAGGTTTTGC AACAGGAAAC TGAGATCGAC 
AGCATTCACC AGTTAGTCGT GGGGGCAACT GAAAATATTA AGGAAGGCAA CGAAGACATC 
CGAGAGGCCA TCAAAAACAA TGCAGGTTTC CGAGTGTGGA TCCTCTTCTT CCTCGTGATG 
TGTTCCTTTT CCTTGCTCTT CCTCGACTGG TATGACAGCT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006504175.1
CDS170..931
Misc Feature(1)659..835
Misc Feature(2)order(662..664,668..673,677..694,698..706,710..715,719..727,731..736,740..748,752..757,761..778,782..799,803..820,824..832)
Misc Feature(3)752..754
Translation

Target ORF information:

RefSeq Version XM_006504112.3
Organism Mus musculus(house mouse)
Definition Mus musculus syntaxin 18 (Stx18), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006504112.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCTGACT ATGGGAGGAT GACAGACACA GAGCGAGACC AGATAGACCA GGATGCTCAG 
ATATTCATAA GGACCTGTTC AGAAGCAATC CATCAACTCA GAACAGAAGC CCACAAGGAG 
ATACATTCCC AGCAAGTGAA GGAACACAGG ACTGCCGTTT TGGATTTCGT TGACGATTAC 
TTAAAAAGAG TGTGTAAGCT TTACTCTGAA CAAAGAGCCA TCCGAGTGAA GCGCGTGGTG 
GACAAGAAAA GACTATCTAA GCTGGAACCT GAGCCACATA CCAAGAGGAA AGACTCCACA 
TCTGAGAAAG CCCCTCAGAA CGCTTCCCAG GACTCTGAAG GAAAGCCTGC TGCTGAGGAG 
CTGCCAGAAA AGCCTTTGGC TGAATCACAG CCCGAACTGG GAACCTGGGG CGATGGCAAG 
GGTGAAGATG AGCTGTCTCC AGAAGAGATA CAGATGTTTG AACAAGAAAA TCAGCGACTC 
ATTGGTGAAA TGAACAGCTT GTTTGACGAA GTGAGGCAAA TCGAAGGGAA AGTCGTTGAA 
ATTTCCAGAC TCCAAGAGAT ATTCACCGAA AAGGTTTTGC AACAGGAAAC TGAGATCGAC 
AGCATTCACC AGTTAGTCGT GGGGGCAACT GAAAATATTA AGGAAGGCAA CGAAGACATC 
CGAGAGGCCA TCAAAAACAA TGCAGGTTTC CGAGTGTGGA TCCTCTTCTT CCTCGTGATG 
TGTTCCTTTT CCTTGCTCTT CCTCGACTGG TATGACAGCT AG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Nucleic acids research42(Database issue)D802-9(2014 Jan)
Koscielny G,Yaikhom G,Iyer V,Meehan TF,Morgan H,Atienza-Herrero J,Blake A,Chen CK,Easty R,Di Fenza A,Fiegel T,Grifiths M,Horne A,Karp NA,Kurbatova N,Mason JC,Matthews P,Oakley DJ,Qazi A,Regnart J,Retha A,Santos LA,Sneddon DJ,Warren J,Westerberg H,Wilson RJ,Melvin DG,Smedley D,Brown SD,Flicek P,Skarnes WC,Mallon AM,Parkinson H


book

Sec22b is a negative regulator of phagocytosis in macrophages.
Molecular biology of the cell20(20)4435-43(2009 Oct)
Hatsuzawa K,Hashimoto H,Hashimoto H,Arai S,Tamura T,Higa-Nishiyama A,Wada I


book

Bovine papillomavirus type 1 infection is mediated by SNARE syntaxin 18.
Journal of virology81(14)7435-48(2007 Jul)
Laniosz V,Nguyen KC,Meneses PI


book

Involvement of syntaxin 18, an endoplasmic reticulum (ER)-localized SNARE protein, in ER-mediated phagocytosis.
Molecular biology of the cell17(9)3964-77(2006 Sep)
Hatsuzawa K,Tamura T,Hashimoto H,Hashimoto H,Yokoya S,Miura M,Nagaya H,Wada I


book

Physical mapping of the mouse tilted locus identifies an association between human deafness loci DFNA6/14 and vestibular system development.
Genomics77(3)189-99(2001 Oct)
Hurle B,Lane K,Kenney J,Tarantino LM,Bucan M,Brownstein BH,Ornitz DM