Gene Symbol | Lrrc72 |
Entrez Gene ID | 71156 |
Full Name | leucine rich repeat containing 72 |
Synonyms | 1700108M19Rik,4933421E18Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Lrrc72 cDNA ORF clone
Gene Symbol | Lrrc72 |
Entrez Gene ID | 71156 |
Full Name | leucine rich repeat containing 72 |
Synonyms | 1700108M19Rik,4933421E18Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017315204.2 | XP_017170693.1 | leucine-rich repeat-containing protein 72 isoform X2 |
NM_027699.2 | NP_081975.1 | leucine-rich repeat-containing protein 72 isoform 1 |
XM_006515213.2 | XP_006515276.1 | leucine-rich repeat-containing protein 72 isoform X1 |
NM_027699.3 | NP_081975.1 | leucine-rich repeat-containing protein 72 isoform 1 |
XM_030246921.1 | XP_030102781.1 | leucine-rich repeat-containing protein 72 isoform X3 |
XM_030246923.1 | XP_030102783.1 | leucine-rich repeat-containing protein 72 isoform X3 |
XM_017315204.1 | XP_017170693.1 | leucine-rich repeat-containing protein 72 isoform X2 |
NM_001177877.1 | NP_001171348.1 | leucine-rich repeat-containing protein 72 isoform 2 |
NM_001361098.1 | NP_001348027.1 | leucine-rich repeat-containing protein 72 isoform 3 |
XM_030246922.1 | XP_030102782.1 | leucine-rich repeat-containing protein 72 isoform X3 |
Homo sapiens (human) | LRRC72 | NP_001182209.1 |
Canis lupus familiaris (dog) | LRRC72 | XP_003639530.2 |
Bos taurus (cattle) | LRRC72 | NP_001092659.1 |
Mus musculus (house mouse) | Lrrc72 | NP_001171348.1 |
Pan troglodytes (chimpanzee) | LRRC72 | XP_001150272.2 |
LOC714834 | XP_001104786.2 | |
Gallus gallus (chicken) | LRRC72 | XP_418694.3 |
Rattus norvegicus (Norway rat) | Lrrc72 | XP_216698.5 |
Danio rerio (zebrafish) | LOC101883707 | XP_005157823.1 |
Xenopus tropicalis (tropical clawed frog) | lrrc72 | XP_002933350.2 |
Transcriptome Analysis of Targeted Mouse Mutations Reveals the Topography of Local Changes in Gene Expression.
West DB, Engelhard EK, Adkisson M, Nava AJ, Kirov JV, Cipollone A, Willis B, Rapp J, de Jong PJ, Lloyd KC
PLoS genetics12(2)e1005691(2016 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Lrrc72 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Lrrc72 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu00990 | |
Clone ID Related Accession (Same CDS sequence) | NM_001177877.1 | |
Accession Version | NM_001177877.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 315bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-25 | |
Organism | Mus musculus(house mouse) | |
Product | leucine-rich repeat-containing protein 72 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK016859.1. Transcript Variant: This variant (2) has alternate 5' and 3' sequences, as compared to variant 1. The resulting isoform (2) has a longer N-terminus but is truncated at the C-terminus, as compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: AK016859.1, BY716535.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAAGGAGC TGAAGGGGAT GCAGAATCTG CGGAGCCTAA GTCTGTACCA AAACCCTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001171348.1 |
CDS | 496..810 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001177877.1 |
1 | ATGAAGGAGC TGAAGGGGAT GCAGAATCTG CGGAGCCTAA GTCTGTACCA AAACCCTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04507 | |
Clone ID Related Accession (Same CDS sequence) | NM_027699.2 , NM_027699.3 , XM_030246921.1 , XM_030246923.1 , XM_030246922.1 | |
Accession Version | NM_027699.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 321bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-04-28 | |
Organism | Mus musculus(house mouse) | |
Product | leucine-rich repeat-containing protein 72 isoform 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK007140.1. On Apr 5, 2007 this sequence version replaced NM_027699.1. Transcript Variant: This variant (1) encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: AK007140.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATTACCA TTTTTGACCA TAAAAAAGCT CATGTGATTC AATCAGTAGC ATTTGGAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_081975.1 |
CDS | 149..469 |
Translation |
Target ORF information:
Target ORF information:
|
NM_027699.2 |
1 | ATGATTACCA TTTTTGACCA TAAAAAAGCT CATGTGATTC AATCAGTAGC ATTTGGAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04507 | |
Clone ID Related Accession (Same CDS sequence) | NM_027699.2 , NM_027699.3 , XM_030246921.1 , XM_030246923.1 , XM_030246922.1 | |
Accession Version | NM_027699.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 321bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-23 | |
Organism | Mus musculus(house mouse) | |
Product | leucine-rich repeat-containing protein 72 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK077182.1, AK007140.1 and AC124776.3. On Mar 1, 2018 this sequence version replaced NM_027699.2. ##Evidence-Data-START## Transcript exon combination :: AK007140.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGATTACCA TTTTTGACCA TAAAAAAGCT CATGTGATTC AATCAGTAGC ATTTGGAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_081975.1 |
CDS | 165..485 |
Translation |
Target ORF information:
Target ORF information:
|
NM_027699.3 |
1 | ATGATTACCA TTTTTGACCA TAAAAAAGCT CATGTGATTC AATCAGTAGC ATTTGGAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47409 | |
Clone ID Related Accession (Same CDS sequence) | XM_006515213.2 , NM_001361098.1 | |
Accession Version | NM_001361098.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 867bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | leucine-rich repeat-containing protein 72 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC124776.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## |
1 | ATGTCCAGAA ACCGGAACTC CTCCTCGTTC GTCTTTCCCT GTACTAAAGT CCGGAAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001348027.1 |
CDS | 87..953 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001361098.1 |
1 | ATGTCCAGAA ACCGGAACTC CTCCTCGTTC GTCTTTCCCT GTACTAAAGT CCGGAAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu47409 | |
Clone ID Related Accession (Same CDS sequence) | XM_006515213.2 , NM_001361098.1 | |
Accession Version | XM_006515213.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 867bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | leucine-rich repeat-containing protein 72 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006515213.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAGAA ACCGGAACTC CTCCTCGTTC GTCTTTCCCT GTACTAAAGT CCGGAAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006515276.1 |
CDS | 434..1300 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006515213.2 |
1 | ATGTCCAGAA ACCGGAACTC CTCCTCGTTC GTCTTTCCCT GTACTAAAGT CCGGAAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04507 | |
Clone ID Related Accession (Same CDS sequence) | NM_027699.2 , NM_027699.3 , XM_030246921.1 , XM_030246923.1 , XM_030246922.1 | |
Accession Version | XM_030246921.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 321bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | leucine-rich repeat-containing protein 72 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTACCA TTTTTGACCA TAAAAAAGCT CATGTGATTC AATCAGTAGC ATTTGGAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030102781.1 |
CDS | 527..847 |
Translation |
Target ORF information:
Target ORF information:
|
XM_030246921.1 |
1 | ATGATTACCA TTTTTGACCA TAAAAAAGCT CATGTGATTC AATCAGTAGC ATTTGGAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04507 | |
Clone ID Related Accession (Same CDS sequence) | NM_027699.2 , NM_027699.3 , XM_030246921.1 , XM_030246923.1 , XM_030246922.1 | |
Accession Version | XM_030246923.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 321bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | leucine-rich repeat-containing protein 72 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTACCA TTTTTGACCA TAAAAAAGCT CATGTGATTC AATCAGTAGC ATTTGGAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030102783.1 |
CDS | 313..633 |
Translation |
Target ORF information:
Target ORF information:
|
XM_030246923.1 |
1 | ATGATTACCA TTTTTGACCA TAAAAAAGCT CATGTGATTC AATCAGTAGC ATTTGGAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu04507 | |
Clone ID Related Accession (Same CDS sequence) | NM_027699.2 , NM_027699.3 , XM_030246921.1 , XM_030246923.1 , XM_030246922.1 | |
Accession Version | XM_030246922.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 321bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | leucine-rich repeat-containing protein 72 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTACCA TTTTTGACCA TAAAAAAGCT CATGTGATTC AATCAGTAGC ATTTGGAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030102782.1 |
CDS | 480..800 |
Translation |
Target ORF information:
Target ORF information:
|
XM_030246922.1 |
1 | ATGATTACCA TTTTTGACCA TAAAAAAGCT CATGTGATTC AATCAGTAGC ATTTGGAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu78311 | |
Clone ID Related Accession (Same CDS sequence) | XM_017315204.2 , XM_017315204.1 | |
Accession Version | XM_017315204.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 630bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | leucine-rich repeat-containing protein 72 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_017315204.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAGAA ACCGGAACTC CTCCTCGTTC GTCTTTCCCT GTACTAAAGT CCGGAAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017170693.1 |
CDS | 434..1063 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017315204.2 |
1 | ATGTCCAGAA ACCGGAACTC CTCCTCGTTC GTCTTTCCCT GTACTAAAGT CCGGAAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu78311 | |
Clone ID Related Accession (Same CDS sequence) | XM_017315204.2 , XM_017315204.1 | |
Accession Version | XM_017315204.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 630bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | leucine-rich repeat-containing protein 72 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAGAA ACCGGAACTC CTCCTCGTTC GTCTTTCCCT GTACTAAAGT CCGGAAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017170693.1 |
CDS | 194..823 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017315204.1 |
1 | ATGTCCAGAA ACCGGAACTC CTCCTCGTTC GTCTTTCCCT GTACTAAAGT CCGGAAGGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Transcriptome Analysis of Targeted Mouse Mutations Reveals the Topography of Local Changes in Gene Expression. |