• English
  • Sign In
    Please Sign In
    Sign In
    New to GenScript?
    Register
  • Contact Us
×
Contact us now: +1-877-436-7274

Sfpq cDNA ORF clone, Mus musculus(house mouse)

Summary

Gene Symbol Sfpq
Entrez Gene ID 71514
Full Name splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
Synonyms 1110004P21Rik,2810416M14Rik,5730453G22Rik,9030402K04Rik,AU021830,D4Ertd314e,Gm12940,PSF,REP1
General protein information
Preferred Names

splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)

Names

splicing factor, proline- and glutamine-rich
DNA-binding p52/p100 complex, 100 kDa subunit
PTB-associated splicing factor
polypyrimidine tract-binding protein-associated-splicing factor
Gene Type protein-coding
Organism Mus musculus(house mouse)
Genome

4

4 D2.2|4 61.2 cM

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_006503406.3 XP_006503469.1 splicing factor, proline- and glutamine-rich isoform X1
NM_023603.3 NP_076092.1 splicing factor, proline- and glutamine-rich
XM_006503406.4 XP_006503469.1 splicing factor, proline- and glutamine-rich isoform X1

Pathways from BioSystems


Homologies


Homo sapiens (human) SFPQ NP_005057.1
Pan troglodytes (chimpanzee) SFPQ NP_001238776.1
Mus musculus (house mouse) Sfpq NP_076092.1
Bos taurus (cattle) SFPQ NP_001193220.1
Gallus gallus (chicken) SFPQ XP_417784.3
Danio rerio (zebrafish) sfpq NP_998443.1
Rattus norvegicus (Norway rat) Sfpq NP_001020442.1
Canis lupus familiaris (dog) SFPQ XP_005629463.1

Gene Ontology


Bibliography

Related articles in PubMed

Conserved expression of ultra-conserved noncoding RNA in mammalian nervous system.
Zhou J, Wang R, Zhang J, Zhu L, Liu W, Lu S, Chen P, Li H, Yin B, Yuan J, Qiang B, Shu P, Peng X
Biochimica et biophysica acta1860(12)1159-1168(2017 Dec)

Post-transcriptional gene silencing mediated by microRNAs is controlled by nucleoplasmic Sfpq.
Bottini S, Hamouda-Tekaya N, Mategot R, Zaragosi LE, Audebert S, Pisano S, Grandjean V, Mauduit C, Benahmed M, Barbry P, Repetto E, Trabucchi M
Nature communications8(1)1189(2017 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

These results are compatible with the idea that SFPQ, plays an important role regulating proliferation and migration during the development of the cerebral cortex.
Title: SFPQ associates to LSD1 and regulates the migration of newborn pyramidal neurons in the developing cerebral cortex.

data demonstrate that SFPQ orchestrates spatial gene expression of a newly identified RNA regulon essential for axonal viability.
Title: The RNA-binding protein SFPQ orchestrates an RNA regulon to promote axon viability.

these results show that PSF can repress the transcriptional activation of VEGF stimulated by IGF-1 via recruitment of the Hakai complex
Title: PTB-associated splicing factor inhibits IGF-1-induced VEGF upregulation in a mouse model of oxygen-induced retinopathy.

Quantitative proteomics reveals dynamic interaction of JNK with RNA transport granule proteins Sfpq and Nono during neuronal differentiation
Title: Quantitative proteomics reveals dynamic interaction of c-Jun N-terminal kinase (JNK) with RNA transport granule proteins splicing factor proline- and glutamine-rich (Sfpq) and non-POU domain-containing octamer-binding protein (Nono) during neuronal differentiation.

A protein complex was identified containing PSPC1, PSF and LMX1B, suggesting the existence of this complex in mesodiencephalic dopaminergic neurons.
Title: LMX1B is part of a transcriptional complex with PSPC1 and PSF.

The following Sfpq gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sfpq cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMu15377 NM_023603.3
Latest version!		 Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) (Sfpq), transcript variant 1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $412.30
$589.00
OMu33820 XM_006503406.4
Latest version!		 Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) (Sfpq), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 14-16 $391.30
$559.00
View Old Accession Versions >>
OMu33820 XM_006503406.3 Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) (Sfpq), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $391.30
$559.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OMu15377
Clone ID Related Accession (Same CDS sequence) NM_023603.3
Accession Version NM_023603.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2100bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-11-15
Organism Mus musculus(house mouse)
Product splicing factor, proline- and glutamine-rich
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ067342.1, BC089305.1, AV137948.2 and AW048189.1. On Dec 8, 2009 this sequence version replaced NM_023603.2. Transcript Variant: This variant (1) encodes the functional protein. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC089305.1, AY034062.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
ATGTCTCGGG ATCGGTTCCG GAGTCGCGGT GGCGGCGGTG GAGGCTTTCA CCGGCGTGGA 
GGAGGTGGCG GCCGCGGCGG CCTTCACGAC TTCCGCTCTC CGCCGCCGGG CATGGGCCTC 
AACCAGAACC GCGGCCCCAT GGGCCCGGGC CCTGGCGGCC CGAAGCCGCC GCTCCCGCCT 
CCACCTCCTC ACCAGCAGCA GCAGCAGCCG CCGCCGCAGC AGCCTCCGCC GCAGCAGCCG 
CCGCCGCACC AGCAGCCGCC GCCGCACCAG CCGCCCCATC AACAGCCCCC GCCTCCGCCG 
CAGGAATCCA AGCCCGTCGT CCCCCAAGGC CCCGGCTCGG CGCCGGGGGT GAGCAGTGCG 
CCTCCGCCGG CGGTCTCGGC TCCGCCCGCC AACCCCCCGA CCACCGGCGC CCCTCCGGGC 
CCTGGTCCAA CCCCGACTCC GCCGCCCGCC GTCCCCTCCA CCGCCCCCGG ACCGCCTCCC 
CCATCGACGC CGAGCAGCGG AGTCTCGACC ACCCCTCCAC AGACCGGCGG CCCTCCGCCA 
CCGCCCGCCG GGGGCGCCGG GCCGGGGCCT AAGCCGGGGC CAGGCCCTGG CGGTCCAAAA 
GGCGGCAAGA TGCCCGGTGG GCCTAAGCCT GGAGGTGGCC CGGGCATGGG CGCTCCTGGT 
GGCCACCCGA AGCCACCACA CCGAGGTGGC GGCGAGCCCC GTGGGGGCCG GCAGCATCAT 
GCGCCCTACC ACCAGCAGCA CCACCAGGGG CCCCCTCCCG GCGGACCGGG ACCGCGCACG 
GAGGAGAAGA TCTCCGACTC GGAGGGATTT AAAGCCAACT TGTCTCTCTT GCGGAGGCCT 
GGAGAAAAAA CTTACACACA GCGCTGTCGG TTGTTTGTGG GGAATCTACC TGCTGATATC 
ACAGAGGATG AATTCAAAAG ACTGTTTGCT AAATACGGAG AACCCGGAGA AGTTTTTATC 
AACAAAGGCA AAGGGTTCGG GTTCATTAAG CTTGAATCTA GAGCCTTGGC TGAAATCGCC 
AAAGCTGAGC TTGATGATAC TCCCATGAGA GGTAGACAGC TTCGGGTTCG ATTTGCCACA 
CACGCTGCAG CCCTGTCTGT TCGAAATCTC TCTCCTTATG TTTCCAACGA ACTTTTGGAA 
GAGGCCTTTA GCCAGTTTGG TCCTATTGAA AGGGCTGTTG TAATTGTGGA TGATCGCGGA 
AGATCTACAG GGAAAGGCAT TGTTGAGTTT GCTTCCAAGC CAGCAGCAAG AAAAGCATTT 
GAAAGATGCA GTGAAGGTGT TTTCCTACTG ACAACGACTC CTCGCCCAGT CATTGTGGAA 
CCACTTGAAC AGTTAGATGA CGAAGATGGT CTTCCTGAAA AGCTGGCCCA GAAGAATCCA 
ATGTATCAAA AGGAGAGAGA AACACCACCT CGTTTTGCTC AGCATGGCAC ATTTGAGTAT 
GAATATTCTC AACGATGGAA GTCCTTGGAT GAAATGGAAA AACAGCAAAG GGAACAAGTT 
GAAAAAAACA TGAAGGATGC TAAAGACAAA TTGGAAAGTG AAATGGAAGA TGCTTACCAT 
GAACACCAAG CAAATCTTTT GCGCCAAGAT CTGATGAGAC GCCAGGAAGA ATTAAGGCGC 
ATGGAGGAAC TTCACAGTCA AGAAATGCAG AAACGTAAAG AAATGCAGTT GAGGCAAGAG 
GAGGAACGGC GTAGACGAGA GGAAGAGATG ATGATTCGCC AACGTGAGAT GGAAGAACAA 
ATGAGACGCC AACGAGAAGA AAGTTACAGC AGGATGGGCT ACATGGATCC AAGAGAAAGA 
GACATGAGAA TGGGTGGTGG TGGAACAATG AACATGGGAG ATCCCTATGG TTCAGGAGGC 
CAGAAATTTC CACCACTAGG TGGTGGTGGT GGCATAGGTT ATGAAGCTAA TCCTGGAGTT 
CCACCAGCAA CCATGAGTGG TTCCATGATG GGAAGCGACA TGCGTACTGA GCGCTTTGGG 
CAGGGAGGTG CGGGTCCTGT GGGTGGACAG GGTCCTAGAG GAATGGGGCC TGGAACTCCA 
GCAGGATATG GTAGAGGGAG AGAAGAGTAT GAAGGGCCAA ATAAAAAACC CCGATTTTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_076092.1
CDS117..2216
Translation

Target ORF information:

RefSeq Version NM_023603.3
Organism Mus musculus(house mouse)
Definition Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) (Sfpq), transcript variant 1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_023603.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
ATGTCTCGGG ATCGGTTCCG GAGTCGCGGT GGCGGCGGTG GAGGCTTTCA CCGGCGTGGA 
GGAGGTGGCG GCCGCGGCGG CCTTCACGAC TTCCGCTCTC CGCCGCCGGG CATGGGCCTC 
AACCAGAACC GCGGCCCCAT GGGCCCGGGC CCTGGCGGCC CGAAGCCGCC GCTCCCGCCT 
CCACCTCCTC ACCAGCAGCA GCAGCAGCCG CCGCCGCAGC AGCCTCCGCC GCAGCAGCCG 
CCGCCGCACC AGCAGCCGCC GCCGCACCAG CCGCCCCATC AACAGCCCCC GCCTCCGCCG 
CAGGAATCCA AGCCCGTCGT CCCCCAAGGC CCCGGCTCGG CGCCGGGGGT GAGCAGTGCG 
CCTCCGCCGG CGGTCTCGGC TCCGCCCGCC AACCCCCCGA CCACCGGCGC CCCTCCGGGC 
CCTGGTCCAA CCCCGACTCC GCCGCCCGCC GTCCCCTCCA CCGCCCCCGG ACCGCCTCCC 
CCATCGACGC CGAGCAGCGG AGTCTCGACC ACCCCTCCAC AGACCGGCGG CCCTCCGCCA 
CCGCCCGCCG GGGGCGCCGG GCCGGGGCCT AAGCCGGGGC CAGGCCCTGG CGGTCCAAAA 
GGCGGCAAGA TGCCCGGTGG GCCTAAGCCT GGAGGTGGCC CGGGCATGGG CGCTCCTGGT 
GGCCACCCGA AGCCACCACA CCGAGGTGGC GGCGAGCCCC GTGGGGGCCG GCAGCATCAT 
GCGCCCTACC ACCAGCAGCA CCACCAGGGG CCCCCTCCCG GCGGACCGGG ACCGCGCACG 
GAGGAGAAGA TCTCCGACTC GGAGGGATTT AAAGCCAACT TGTCTCTCTT GCGGAGGCCT 
GGAGAAAAAA CTTACACACA GCGCTGTCGG TTGTTTGTGG GGAATCTACC TGCTGATATC 
ACAGAGGATG AATTCAAAAG ACTGTTTGCT AAATACGGAG AACCCGGAGA AGTTTTTATC 
AACAAAGGCA AAGGGTTCGG GTTCATTAAG CTTGAATCTA GAGCCTTGGC TGAAATCGCC 
AAAGCTGAGC TTGATGATAC TCCCATGAGA GGTAGACAGC TTCGGGTTCG ATTTGCCACA 
CACGCTGCAG CCCTGTCTGT TCGAAATCTC TCTCCTTATG TTTCCAACGA ACTTTTGGAA 
GAGGCCTTTA GCCAGTTTGG TCCTATTGAA AGGGCTGTTG TAATTGTGGA TGATCGCGGA 
AGATCTACAG GGAAAGGCAT TGTTGAGTTT GCTTCCAAGC CAGCAGCAAG AAAAGCATTT 
GAAAGATGCA GTGAAGGTGT TTTCCTACTG ACAACGACTC CTCGCCCAGT CATTGTGGAA 
CCACTTGAAC AGTTAGATGA CGAAGATGGT CTTCCTGAAA AGCTGGCCCA GAAGAATCCA 
ATGTATCAAA AGGAGAGAGA AACACCACCT CGTTTTGCTC AGCATGGCAC ATTTGAGTAT 
GAATATTCTC AACGATGGAA GTCCTTGGAT GAAATGGAAA AACAGCAAAG GGAACAAGTT 
GAAAAAAACA TGAAGGATGC TAAAGACAAA TTGGAAAGTG AAATGGAAGA TGCTTACCAT 
GAACACCAAG CAAATCTTTT GCGCCAAGAT CTGATGAGAC GCCAGGAAGA ATTAAGGCGC 
ATGGAGGAAC TTCACAGTCA AGAAATGCAG AAACGTAAAG AAATGCAGTT GAGGCAAGAG 
GAGGAACGGC GTAGACGAGA GGAAGAGATG ATGATTCGCC AACGTGAGAT GGAAGAACAA 
ATGAGACGCC AACGAGAAGA AAGTTACAGC AGGATGGGCT ACATGGATCC AAGAGAAAGA 
GACATGAGAA TGGGTGGTGG TGGAACAATG AACATGGGAG ATCCCTATGG TTCAGGAGGC 
CAGAAATTTC CACCACTAGG TGGTGGTGGT GGCATAGGTT ATGAAGCTAA TCCTGGAGTT 
CCACCAGCAA CCATGAGTGG TTCCATGATG GGAAGCGACA TGCGTACTGA GCGCTTTGGG 
CAGGGAGGTG CGGGTCCTGT GGGTGGACAG GGTCCTAGAG GAATGGGGCC TGGAACTCCA 
GCAGGATATG GTAGAGGGAG AGAAGAGTAT GAAGGGCCAA ATAAAAAACC CCGATTTTAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu33820
Clone ID Related Accession (Same CDS sequence) XM_006503406.3 , XM_006503406.4
Accession Version XM_006503406.4 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2253bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-08-07
Organism Mus musculus(house mouse)
Product splicing factor, proline- and glutamine-rich isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006503406.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
ATGGAAATCC CAGCCCTCCC TACCTCCCGC CTCTCACTAG GGAGCCAATT GGAAAAACTT 
AGGTTTCATC ATCAAGTACT GTACTTGCTA TTGGCTGTCC GAGCTGTCAA TCTAGGGAAG 
GCGGGCCAGG CCGAACTGTC CTATTTAAGA AGAGGACAAA GGCGGCGCGC AGCTTGTGTC 
GTCCGCCATT TTGTGCTCAG CAAGGTGGCA ACCACGTTCC CTGAGCGACT TCTCCGCTTC 
TGCCTCGACC GCCCCTTGAC TACAGCTATG TCTCGGGATC GGTTCCGGAG TCGCGGTGGC 
GGCGGTGGAG GCTTTCACCG GCGTGGAGGA GGTGGCGGCC GCGGCGGCCT TCACGACTTC 
CGCTCTCCGC CGCCGGGCAT GGGCCTCAAC CAGAACCGCG GCCCCATGGG CCCGGGCCCT 
GGCGGCCCGA AGCCGCCGCT CCCGCCTCCA CCTCCTCACC AGCAGCAGCA GCAGCCGCCG 
CCGCAGCAGC CTCCGCCGCA GCAGCCGCCG CCGCACCAGC AGCCGCCGCC GCACCAGCCG 
CCCCATCAAC AGCCCCCGCC TCCGCCGCAG GAATCCAAGC CCGTCGTCCC CCAAGGCCCC 
GGCTCGGCGC CGGGGGTGAG CAGTGCGCCT CCGCCGGCGG TCTCGGCTCC GCCCGCCAAC 
CCCCCGACCA CCGGCGCCCC TCCGGGCCCT GGTCCAACCC CGACTCCGCC GCCCGCCGTC 
CCCTCCACCG CCCCCGGACC GCCTCCCCCA TCGACGCCGA GCAGCGGAGT CTCGACCACC 
CCTCCACAGA CCGGCGGCCC TCCGCCACCG CCCGCCGGGG GCGCCGGGCC GGGGCCTAAG 
CCGGGGCCAG GCCCTGGCGG TCCAAAAGGC GGCAAGATGC CCGGTGGGCC TAAGCCTGGA 
GGTGGCCCGG GCATGGGCGC TCCTGGTGGC CACCCGAAGC CACCACACCG AGGTGGCGGC 
GAGCCCCGTG GGGGCCGGCA GCATCATGCG CCCTACCACC AGCAGCACCA CCAGGGGCCC 
CCTCCCGGCG GACCGGGACC GCGCACGGAG GAGAAGATCT CCGACTCGGA GGGATTTAAA 
GCCAACTTGT CTCTCTTGCG GAGGCCTGGA GAAAAAACTT ACACACAGCG CTGTCGGTTG 
TTTGTGGGGA ATCTACCTGC TGATATCACA GAGGATGAAT TCAAAAGACT GTTTGCTAAA 
TACGGAGAAC CCGGAGAAGT TTTTATCAAC AAAGGCAAAG GGTTCGGGTT CATTAAGCTT 
GAATCTAGAG CCTTGGCTGA AATCGCCAAA GCTGAGCTTG ATGATACTCC CATGAGAGGT 
AGACAGCTTC GGGTTCGATT TGCCACACAC GCTGCAGCCC TGTCTGTTCG AAATCTCTCT 
CCTTATGTTT CCAACGAACT TTTGGAAGAG GCCTTTAGCC AGTTTGGTCC TATTGAAAGG 
GCTGTTGTAA TTGTGGATGA TCGCGGAAGA TCTACAGGGA AAGGCATTGT TGAGTTTGCT 
TCCAAGCCAG CAGCAAGAAA AGCATTTGAA AGATGCAGTG AAGGTGTTTT CCTACTGACA 
ACGACTCCTC GCCCAGTCAT TGTGGAACCA CTTGAACAGT TAGATGACGA AGATGGTCTT 
CCTGAAAAGC TGGCCCAGAA GAATCCAATG TATCAAAAGG AGAGAGAAAC ACCACCTCGT 
TTTGCTCAGC ATGGCACATT TGAGTATGAA TATTCTCAAC GATGGAAGTC CTTGGATGAA 
ATGGAAAAAC AGCAAAGGGA ACAAGTTGAA AAAAACATGA AGGATGCTAA AGACAAATTG 
GAAAGTGAAA TGGAAGATGC TTACCATGAA CACCAAGCAA ATCTTTTGCG CCAAGATCTG 
ATGAGACGCC AGGAAGAATT AAGGCGCATG GAGGAACTTC ACAGTCAAGA AATGCAGAAA 
CGTAAAGAAA TGCAGTTGAG GCAAGAGGAG GAACGGCGTA GACGAGAGGA AGAGATGATG 
ATTCGCCAAC GTGAGATGGA AGAACAAATG AGACGCCAAC GAGAAGAAAG TTACAGCAGG 
ATGGGCTACA TGGATCCAAG AGAAAGAGAC ATGAGAATGG GTGGTGGTGG AACAATGAAC 
ATGGGAGATC CCTATGGTTC AGGAGGCCAG AAATTTCCAC CACTAGGTGG TGGTGGTGGC 
ATAGGTTATG AAGCTAATCC TGGAGTTCCA CCAGCAACCA TGAGTGGTTC CATGATGGGA 
AGCGACATGG TAAGAATGAT TGATGTTGGC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006503469.1
CDS435..2687
Translation

Target ORF information:

RefSeq Version XM_006503406.4
Organism Mus musculus(house mouse)
Definition Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) (Sfpq), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006503406.4

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
ATGGAAATCC CAGCCCTCCC TACCTCCCGC CTCTCACTAG GGAGCCAATT GGAAAAACTT 
AGGTTTCATC ATCAAGTACT GTACTTGCTA TTGGCTGTCC GAGCTGTCAA TCTAGGGAAG 
GCGGGCCAGG CCGAACTGTC CTATTTAAGA AGAGGACAAA GGCGGCGCGC AGCTTGTGTC 
GTCCGCCATT TTGTGCTCAG CAAGGTGGCA ACCACGTTCC CTGAGCGACT TCTCCGCTTC 
TGCCTCGACC GCCCCTTGAC TACAGCTATG TCTCGGGATC GGTTCCGGAG TCGCGGTGGC 
GGCGGTGGAG GCTTTCACCG GCGTGGAGGA GGTGGCGGCC GCGGCGGCCT TCACGACTTC 
CGCTCTCCGC CGCCGGGCAT GGGCCTCAAC CAGAACCGCG GCCCCATGGG CCCGGGCCCT 
GGCGGCCCGA AGCCGCCGCT CCCGCCTCCA CCTCCTCACC AGCAGCAGCA GCAGCCGCCG 
CCGCAGCAGC CTCCGCCGCA GCAGCCGCCG CCGCACCAGC AGCCGCCGCC GCACCAGCCG 
CCCCATCAAC AGCCCCCGCC TCCGCCGCAG GAATCCAAGC CCGTCGTCCC CCAAGGCCCC 
GGCTCGGCGC CGGGGGTGAG CAGTGCGCCT CCGCCGGCGG TCTCGGCTCC GCCCGCCAAC 
CCCCCGACCA CCGGCGCCCC TCCGGGCCCT GGTCCAACCC CGACTCCGCC GCCCGCCGTC 
CCCTCCACCG CCCCCGGACC GCCTCCCCCA TCGACGCCGA GCAGCGGAGT CTCGACCACC 
CCTCCACAGA CCGGCGGCCC TCCGCCACCG CCCGCCGGGG GCGCCGGGCC GGGGCCTAAG 
CCGGGGCCAG GCCCTGGCGG TCCAAAAGGC GGCAAGATGC CCGGTGGGCC TAAGCCTGGA 
GGTGGCCCGG GCATGGGCGC TCCTGGTGGC CACCCGAAGC CACCACACCG AGGTGGCGGC 
GAGCCCCGTG GGGGCCGGCA GCATCATGCG CCCTACCACC AGCAGCACCA CCAGGGGCCC 
CCTCCCGGCG GACCGGGACC GCGCACGGAG GAGAAGATCT CCGACTCGGA GGGATTTAAA 
GCCAACTTGT CTCTCTTGCG GAGGCCTGGA GAAAAAACTT ACACACAGCG CTGTCGGTTG 
TTTGTGGGGA ATCTACCTGC TGATATCACA GAGGATGAAT TCAAAAGACT GTTTGCTAAA 
TACGGAGAAC CCGGAGAAGT TTTTATCAAC AAAGGCAAAG GGTTCGGGTT CATTAAGCTT 
GAATCTAGAG CCTTGGCTGA AATCGCCAAA GCTGAGCTTG ATGATACTCC CATGAGAGGT 
AGACAGCTTC GGGTTCGATT TGCCACACAC GCTGCAGCCC TGTCTGTTCG AAATCTCTCT 
CCTTATGTTT CCAACGAACT TTTGGAAGAG GCCTTTAGCC AGTTTGGTCC TATTGAAAGG 
GCTGTTGTAA TTGTGGATGA TCGCGGAAGA TCTACAGGGA AAGGCATTGT TGAGTTTGCT 
TCCAAGCCAG CAGCAAGAAA AGCATTTGAA AGATGCAGTG AAGGTGTTTT CCTACTGACA 
ACGACTCCTC GCCCAGTCAT TGTGGAACCA CTTGAACAGT TAGATGACGA AGATGGTCTT 
CCTGAAAAGC TGGCCCAGAA GAATCCAATG TATCAAAAGG AGAGAGAAAC ACCACCTCGT 
TTTGCTCAGC ATGGCACATT TGAGTATGAA TATTCTCAAC GATGGAAGTC CTTGGATGAA 
ATGGAAAAAC AGCAAAGGGA ACAAGTTGAA AAAAACATGA AGGATGCTAA AGACAAATTG 
GAAAGTGAAA TGGAAGATGC TTACCATGAA CACCAAGCAA ATCTTTTGCG CCAAGATCTG 
ATGAGACGCC AGGAAGAATT AAGGCGCATG GAGGAACTTC ACAGTCAAGA AATGCAGAAA 
CGTAAAGAAA TGCAGTTGAG GCAAGAGGAG GAACGGCGTA GACGAGAGGA AGAGATGATG 
ATTCGCCAAC GTGAGATGGA AGAACAAATG AGACGCCAAC GAGAAGAAAG TTACAGCAGG 
ATGGGCTACA TGGATCCAAG AGAAAGAGAC ATGAGAATGG GTGGTGGTGG AACAATGAAC 
ATGGGAGATC CCTATGGTTC AGGAGGCCAG AAATTTCCAC CACTAGGTGG TGGTGGTGGC 
ATAGGTTATG AAGCTAATCC TGGAGTTCCA CCAGCAACCA TGAGTGGTTC CATGATGGGA 
AGCGACATGG TAAGAATGAT TGATGTTGGC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMu33820
Clone ID Related Accession (Same CDS sequence) XM_006503406.3 , XM_006503406.4
Accession Version XM_006503406.3 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2253bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-06-21
Organism Mus musculus(house mouse)
Product splicing factor, proline- and glutamine-rich isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000070.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006503406.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
ATGGAAATCC CAGCCCTCCC TACCTCCCGC CTCTCACTAG GGAGCCAATT GGAAAAACTT 
AGGTTTCATC ATCAAGTACT GTACTTGCTA TTGGCTGTCC GAGCTGTCAA TCTAGGGAAG 
GCGGGCCAGG CCGAACTGTC CTATTTAAGA AGAGGACAAA GGCGGCGCGC AGCTTGTGTC 
GTCCGCCATT TTGTGCTCAG CAAGGTGGCA ACCACGTTCC CTGAGCGACT TCTCCGCTTC 
TGCCTCGACC GCCCCTTGAC TACAGCTATG TCTCGGGATC GGTTCCGGAG TCGCGGTGGC 
GGCGGTGGAG GCTTTCACCG GCGTGGAGGA GGTGGCGGCC GCGGCGGCCT TCACGACTTC 
CGCTCTCCGC CGCCGGGCAT GGGCCTCAAC CAGAACCGCG GCCCCATGGG CCCGGGCCCT 
GGCGGCCCGA AGCCGCCGCT CCCGCCTCCA CCTCCTCACC AGCAGCAGCA GCAGCCGCCG 
CCGCAGCAGC CTCCGCCGCA GCAGCCGCCG CCGCACCAGC AGCCGCCGCC GCACCAGCCG 
CCCCATCAAC AGCCCCCGCC TCCGCCGCAG GAATCCAAGC CCGTCGTCCC CCAAGGCCCC 
GGCTCGGCGC CGGGGGTGAG CAGTGCGCCT CCGCCGGCGG TCTCGGCTCC GCCCGCCAAC 
CCCCCGACCA CCGGCGCCCC TCCGGGCCCT GGTCCAACCC CGACTCCGCC GCCCGCCGTC 
CCCTCCACCG CCCCCGGACC GCCTCCCCCA TCGACGCCGA GCAGCGGAGT CTCGACCACC 
CCTCCACAGA CCGGCGGCCC TCCGCCACCG CCCGCCGGGG GCGCCGGGCC GGGGCCTAAG 
CCGGGGCCAG GCCCTGGCGG TCCAAAAGGC GGCAAGATGC CCGGTGGGCC TAAGCCTGGA 
GGTGGCCCGG GCATGGGCGC TCCTGGTGGC CACCCGAAGC CACCACACCG AGGTGGCGGC 
GAGCCCCGTG GGGGCCGGCA GCATCATGCG CCCTACCACC AGCAGCACCA CCAGGGGCCC 
CCTCCCGGCG GACCGGGACC GCGCACGGAG GAGAAGATCT CCGACTCGGA GGGATTTAAA 
GCCAACTTGT CTCTCTTGCG GAGGCCTGGA GAAAAAACTT ACACACAGCG CTGTCGGTTG 
TTTGTGGGGA ATCTACCTGC TGATATCACA GAGGATGAAT TCAAAAGACT GTTTGCTAAA 
TACGGAGAAC CCGGAGAAGT TTTTATCAAC AAAGGCAAAG GGTTCGGGTT CATTAAGCTT 
GAATCTAGAG CCTTGGCTGA AATCGCCAAA GCTGAGCTTG ATGATACTCC CATGAGAGGT 
AGACAGCTTC GGGTTCGATT TGCCACACAC GCTGCAGCCC TGTCTGTTCG AAATCTCTCT 
CCTTATGTTT CCAACGAACT TTTGGAAGAG GCCTTTAGCC AGTTTGGTCC TATTGAAAGG 
GCTGTTGTAA TTGTGGATGA TCGCGGAAGA TCTACAGGGA AAGGCATTGT TGAGTTTGCT 
TCCAAGCCAG CAGCAAGAAA AGCATTTGAA AGATGCAGTG AAGGTGTTTT CCTACTGACA 
ACGACTCCTC GCCCAGTCAT TGTGGAACCA CTTGAACAGT TAGATGACGA AGATGGTCTT 
CCTGAAAAGC TGGCCCAGAA GAATCCAATG TATCAAAAGG AGAGAGAAAC ACCACCTCGT 
TTTGCTCAGC ATGGCACATT TGAGTATGAA TATTCTCAAC GATGGAAGTC CTTGGATGAA 
ATGGAAAAAC AGCAAAGGGA ACAAGTTGAA AAAAACATGA AGGATGCTAA AGACAAATTG 
GAAAGTGAAA TGGAAGATGC TTACCATGAA CACCAAGCAA ATCTTTTGCG CCAAGATCTG 
ATGAGACGCC AGGAAGAATT AAGGCGCATG GAGGAACTTC ACAGTCAAGA AATGCAGAAA 
CGTAAAGAAA TGCAGTTGAG GCAAGAGGAG GAACGGCGTA GACGAGAGGA AGAGATGATG 
ATTCGCCAAC GTGAGATGGA AGAACAAATG AGACGCCAAC GAGAAGAAAG TTACAGCAGG 
ATGGGCTACA TGGATCCAAG AGAAAGAGAC ATGAGAATGG GTGGTGGTGG AACAATGAAC 
ATGGGAGATC CCTATGGTTC AGGAGGCCAG AAATTTCCAC CACTAGGTGG TGGTGGTGGC 
ATAGGTTATG AAGCTAATCC TGGAGTTCCA CCAGCAACCA TGAGTGGTTC CATGATGGGA 
AGCGACATGG TAAGAATGAT TGATGTTGGC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006503469.1
CDS591..2843
Translation

Target ORF information:

RefSeq Version XM_006503406.3
Organism Mus musculus(house mouse)
Definition Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) (Sfpq), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006503406.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
ATGGAAATCC CAGCCCTCCC TACCTCCCGC CTCTCACTAG GGAGCCAATT GGAAAAACTT 
AGGTTTCATC ATCAAGTACT GTACTTGCTA TTGGCTGTCC GAGCTGTCAA TCTAGGGAAG 
GCGGGCCAGG CCGAACTGTC CTATTTAAGA AGAGGACAAA GGCGGCGCGC AGCTTGTGTC 
GTCCGCCATT TTGTGCTCAG CAAGGTGGCA ACCACGTTCC CTGAGCGACT TCTCCGCTTC 
TGCCTCGACC GCCCCTTGAC TACAGCTATG TCTCGGGATC GGTTCCGGAG TCGCGGTGGC 
GGCGGTGGAG GCTTTCACCG GCGTGGAGGA GGTGGCGGCC GCGGCGGCCT TCACGACTTC 
CGCTCTCCGC CGCCGGGCAT GGGCCTCAAC CAGAACCGCG GCCCCATGGG CCCGGGCCCT 
GGCGGCCCGA AGCCGCCGCT CCCGCCTCCA CCTCCTCACC AGCAGCAGCA GCAGCCGCCG 
CCGCAGCAGC CTCCGCCGCA GCAGCCGCCG CCGCACCAGC AGCCGCCGCC GCACCAGCCG 
CCCCATCAAC AGCCCCCGCC TCCGCCGCAG GAATCCAAGC CCGTCGTCCC CCAAGGCCCC 
GGCTCGGCGC CGGGGGTGAG CAGTGCGCCT CCGCCGGCGG TCTCGGCTCC GCCCGCCAAC 
CCCCCGACCA CCGGCGCCCC TCCGGGCCCT GGTCCAACCC CGACTCCGCC GCCCGCCGTC 
CCCTCCACCG CCCCCGGACC GCCTCCCCCA TCGACGCCGA GCAGCGGAGT CTCGACCACC 
CCTCCACAGA CCGGCGGCCC TCCGCCACCG CCCGCCGGGG GCGCCGGGCC GGGGCCTAAG 
CCGGGGCCAG GCCCTGGCGG TCCAAAAGGC GGCAAGATGC CCGGTGGGCC TAAGCCTGGA 
GGTGGCCCGG GCATGGGCGC TCCTGGTGGC CACCCGAAGC CACCACACCG AGGTGGCGGC 
GAGCCCCGTG GGGGCCGGCA GCATCATGCG CCCTACCACC AGCAGCACCA CCAGGGGCCC 
CCTCCCGGCG GACCGGGACC GCGCACGGAG GAGAAGATCT CCGACTCGGA GGGATTTAAA 
GCCAACTTGT CTCTCTTGCG GAGGCCTGGA GAAAAAACTT ACACACAGCG CTGTCGGTTG 
TTTGTGGGGA ATCTACCTGC TGATATCACA GAGGATGAAT TCAAAAGACT GTTTGCTAAA 
TACGGAGAAC CCGGAGAAGT TTTTATCAAC AAAGGCAAAG GGTTCGGGTT CATTAAGCTT 
GAATCTAGAG CCTTGGCTGA AATCGCCAAA GCTGAGCTTG ATGATACTCC CATGAGAGGT 
AGACAGCTTC GGGTTCGATT TGCCACACAC GCTGCAGCCC TGTCTGTTCG AAATCTCTCT 
CCTTATGTTT CCAACGAACT TTTGGAAGAG GCCTTTAGCC AGTTTGGTCC TATTGAAAGG 
GCTGTTGTAA TTGTGGATGA TCGCGGAAGA TCTACAGGGA AAGGCATTGT TGAGTTTGCT 
TCCAAGCCAG CAGCAAGAAA AGCATTTGAA AGATGCAGTG AAGGTGTTTT CCTACTGACA 
ACGACTCCTC GCCCAGTCAT TGTGGAACCA CTTGAACAGT TAGATGACGA AGATGGTCTT 
CCTGAAAAGC TGGCCCAGAA GAATCCAATG TATCAAAAGG AGAGAGAAAC ACCACCTCGT 
TTTGCTCAGC ATGGCACATT TGAGTATGAA TATTCTCAAC GATGGAAGTC CTTGGATGAA 
ATGGAAAAAC AGCAAAGGGA ACAAGTTGAA AAAAACATGA AGGATGCTAA AGACAAATTG 
GAAAGTGAAA TGGAAGATGC TTACCATGAA CACCAAGCAA ATCTTTTGCG CCAAGATCTG 
ATGAGACGCC AGGAAGAATT AAGGCGCATG GAGGAACTTC ACAGTCAAGA AATGCAGAAA 
CGTAAAGAAA TGCAGTTGAG GCAAGAGGAG GAACGGCGTA GACGAGAGGA AGAGATGATG 
ATTCGCCAAC GTGAGATGGA AGAACAAATG AGACGCCAAC GAGAAGAAAG TTACAGCAGG 
ATGGGCTACA TGGATCCAAG AGAAAGAGAC ATGAGAATGG GTGGTGGTGG AACAATGAAC 
ATGGGAGATC CCTATGGTTC AGGAGGCCAG AAATTTCCAC CACTAGGTGG TGGTGGTGGC 
ATAGGTTATG AAGCTAATCC TGGAGTTCCA CCAGCAACCA TGAGTGGTTC CATGATGGGA 
AGCGACATGG TAAGAATGAT TGATGTTGGC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Conserved expression of ultra-conserved noncoding RNA in mammalian nervous system.
Biochimica et biophysica acta1860(12)1159-1168(2017 Dec)
Zhou J,Wang R,Zhang J,Zhu L,Liu W,Lu S,Chen P,Li H,Yin B,Yuan J,Qiang B,Shu P,Peng X


book

Post-transcriptional gene silencing mediated by microRNAs is controlled by nucleoplasmic Sfpq.
Nature communications8(1)1189(2017 Oct)
Bottini S,Hamouda-Tekaya N,Mategot R,Zaragosi LE,Audebert S,Pisano S,Grandjean V,Mauduit C,Benahmed M,Barbry P,Repetto E,Trabucchi M