Gene Symbol | Cdpf1 |
Entrez Gene ID | 72355 |
Full Name | cysteine rich, DPF motif domain containing 1 |
Synonyms | 2210021J22Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Cdpf1 cDNA ORF clone
Gene Symbol | Cdpf1 |
Entrez Gene ID | 72355 |
Full Name | cysteine rich, DPF motif domain containing 1 |
Synonyms | 2210021J22Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001164626.1 | NP_001158098.1 | cysteine-rich DPF motif domain-containing protein 1 |
NM_001164625.1 | NP_001158097.1 | cysteine-rich DPF motif domain-containing protein 1 |
NM_197998.2 | NP_932115.2 | cysteine-rich DPF motif domain-containing protein 1 |
XM_006521448.1 | XP_006521511.1 | cysteine-rich DPF motif domain-containing protein 1 isoform X1 |
XM_006521448.2 | XP_006521511.1 | cysteine-rich DPF motif domain-containing protein 1 isoform X1 |
XM_006521447.1 | XP_006521510.1 | cysteine-rich DPF motif domain-containing protein 1 isoform X1 |
Homo sapiens (human) | CDPF1 | NP_997210.3 |
Mus musculus (house mouse) | Cdpf1 | NP_001158098.1 |
Gallus gallus (chicken) | C1H22ORF40 | NP_001025943.1 |
Pan troglodytes (chimpanzee) | CDPF1 | XP_003953958.1 |
Canis lupus familiaris (dog) | CDPF1 | XP_005625802.1 |
CDPF1 | XP_001110941.2 | |
Danio rerio (zebrafish) | si:ch211-239e6.4 | NP_001020698.1 |
Xenopus tropicalis (tropical clawed frog) | cdpf1 | XP_004912368.1 |
Bos taurus (cattle) | CDPF1 | NP_001069561.1 |
Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set.
VanBuren V, Piao Y, Dudekula DB, Qian Y, Carter MG, Martin PR, Stagg CA, Bassey UC, Aiba K, Hamatani T, Kargul GJ, Luo AG, Kelso J, Hide W, Ko MS
Genome research12(12)1999-2003(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Cdpf1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cdpf1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu08764 | |
Clone ID Related Accession (Same CDS sequence) | NM_001164626.1 , NM_001164625.1 , NM_197998.2 , XM_006521448.1 , XM_006521448.2 , XM_006521447.1 | |
Accession Version | NM_001164626.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 360bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Mus musculus(house mouse) | |
Product | cysteine-rich DPF motif domain-containing protein 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC117784.13, BY081241.1, AK008763.1 and AI849737.1. Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 3, encode the same protein. ##Evidence-Data-START## Transcript exon combination :: BF584197.1, BQ265318.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849376 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001158098.1 |
CDS | 60..419 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001164626.1 |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08764 | |
Clone ID Related Accession (Same CDS sequence) | NM_001164626.1 , NM_001164625.1 , NM_197998.2 , XM_006521448.1 , XM_006521448.2 , XM_006521447.1 | |
Accession Version | NM_001164625.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 360bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-21 | |
Organism | Mus musculus(house mouse) | |
Product | cysteine-rich DPF motif domain-containing protein 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC117784.13, BQ550379.1, AK008763.1 and AI849737.1. Transcript Variant: This variant (1) represents the longest transcript. ##Evidence-Data-START## Transcript exon combination :: BQ550379.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849376, SAMN00849378 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001158097.1 |
CDS | 266..625 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001164625.1 |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08764 | |
Clone ID Related Accession (Same CDS sequence) | NM_001164626.1 , NM_001164625.1 , NM_197998.2 , XM_006521448.1 , XM_006521448.2 , XM_006521447.1 | |
Accession Version | NM_197998.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 360bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-22 | |
Organism | Mus musculus(house mouse) | |
Product | cysteine-rich DPF motif domain-containing protein 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC117784.13, BY081241.1, AK008763.1 and AI849737.1. On Sep 9, 2009 this sequence version replaced NM_197998.1. Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 3, encode the same protein. ##Evidence-Data-START## Transcript exon combination :: BC025858.1, BI555367.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849382, SAMN01164134 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_932115.2 |
CDS | 207..566 |
Translation |
Target ORF information:
Target ORF information:
|
NM_197998.2 |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08764 | |
Clone ID Related Accession (Same CDS sequence) | NM_001164626.1 , NM_001164625.1 , NM_197998.2 , XM_006521448.1 , XM_006521448.2 , XM_006521447.1 | |
Accession Version | XM_006521448.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 360bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | cysteine-rich DPF motif domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000081.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006521511.1 |
CDS | 408..767 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006521448.1 |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08764 | |
Clone ID Related Accession (Same CDS sequence) | NM_001164626.1 , NM_001164625.1 , NM_197998.2 , XM_006521448.1 , XM_006521448.2 , XM_006521447.1 | |
Accession Version | XM_006521447.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 360bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | cysteine-rich DPF motif domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000081.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006521510.1 |
CDS | 242..601 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006521447.1 |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu08764 | |
Clone ID Related Accession (Same CDS sequence) | NM_001164626.1 , NM_001164625.1 , NM_197998.2 , XM_006521448.1 , XM_006521448.2 , XM_006521447.1 | |
Accession Version | XM_006521448.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 360bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | cysteine-rich DPF motif domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000081.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006521448.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006521511.1 |
CDS | 401..760 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006521448.2 |
1 | ATGGCATCTG AGACAGAGCC CCGCCCCCTG GGCACGTTTG AGTGCCAGCT TTGTGCCTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set. |