Gene Symbol | Bbof1 |
Entrez Gene ID | 72873 |
Full Name | basal body orientation factor 1 |
Synonyms | 2900006K08Rik,AI427784,Ccdc176 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Bbof1 cDNA ORF clone
gRNAs
Gene Symbol | Bbof1 |
Entrez Gene ID | 72873 |
Full Name | basal body orientation factor 1 |
Synonyms | 2900006K08Rik,AI427784,Ccdc176 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006516273.2 | XP_006516336.1 | basal body-orientation factor 1 isoform X1 |
NM_028377.3 | NP_082653.2 | basal body-orientation factor 1 |
XM_030246946.1 | XP_030102806.1 | basal body-orientation factor 1 isoform X1 |
XM_030246947.1 | XP_030102807.1 | basal body-orientation factor 1 isoform X2 |
Rattus norvegicus (Norway rat) | Ccdc176 | NP_001128103.1 |
Danio rerio (zebrafish) | si:ch211-163l21.10 | NP_001119891.1 |
Canis lupus familiaris (dog) | CCDC176 | XP_005623713.1 |
Bos taurus (cattle) | CCDC176 | XP_005212180.1 |
Gallus gallus (chicken) | C5H14ORF45 | XP_421259.4 |
Xenopus tropicalis (tropical clawed frog) | ccdc176 | XP_002938641.2 |
Homo sapiens (human) | CCDC176 | NP_079333.2 |
Pan troglodytes (chimpanzee) | CCDC176 | XP_529625.3 |
LOC720051 | XP_001115058.2 | |
Mus musculus (house mouse) | Ccdc176 | NP_082653.2 |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, N?rnberger A, Schmidt K, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S, Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P, Reymond A, Davidson DR, Doll? P, Antonarakis SE, Yaspo ML, Martinez S, Baldock RA, Eichele G, Ballabio A
PLoS biology9(1)e1000582(2011 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Bbof1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Bbof1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu86149 | |
Clone ID Related Accession (Same CDS sequence) | XM_030246946.1 | |
Accession Version | XM_030246946.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1086bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | basal body-orientation factor 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGGCGA AGGACAAGAG GAAAGACAAG AGGAAAGACA AGAGGAAAGG CAAAAACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030102806.1 |
CDS | 722..1807 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGGCGA AGGACAAGAG GAAAGACAAG AGGAAAGACA AGAGGAAAGG CAAAAACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu86150 | |
Clone ID Related Accession (Same CDS sequence) | XM_030246947.1 | |
Accession Version | XM_030246947.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 963bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | basal body-orientation factor 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGGCGA AGGACAAGAG GAAAGACAAG AGGAAAGACA AGAGGAAAGG CAAAAACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_030102807.1 |
CDS | 722..1684 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGGCGA AGGACAAGAG GAAAGACAAG AGGAAAGACA AGAGGAAAGG CAAAAACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu05553 | |
Clone ID Related Accession (Same CDS sequence) | NM_028377.3 | |
Accession Version | NM_028377.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1602bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-21 | |
Organism | Mus musculus(house mouse) | |
Product | basal body-orientation factor 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK013494.1, BC151103.1 and AK133381.1. On Nov 18, 2009 this sequence version replaced NM_028377.2. ##Evidence-Data-START## Transcript exon combination :: AK133381.1, BC151099.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384, SAMN01164131 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCCGGCGA AGGACAAGAG GAAAGACAAG AGGAAAGACA AGAGGAAAGG CAAAAACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_082653.2 |
CDS | 115..1716 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGGCGA AGGACAAGAG GAAAGACAAG AGGAAAGACA AGAGGAAAGG CAAAAACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu48127 | |
Clone ID Related Accession (Same CDS sequence) | XM_006516273.2 | |
Accession Version | XM_006516273.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1620bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | basal body-orientation factor 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000078.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006516273.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGGCGA AGGACAAGAG GAAAGACAAG AGGAAAGACA AGAGGAAAGG CAAAAACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006516336.1 |
CDS | 135..1754 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGGCGA AGGACAAGAG GAAAGACAAG AGGAAAGACA AGAGGAAAGG CAAAAACAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |