Gene Symbol | Otud4 |
Entrez Gene ID | 73945 |
Full Name | OTU domain containing 4 |
Synonyms | 4930431L18Rik,AI449692,D8Ertd69e,mKIAA1046 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Otud4 cDNA ORF clone
Gene Symbol | Otud4 |
Entrez Gene ID | 73945 |
Full Name | OTU domain containing 4 |
Synonyms | 4930431L18Rik,AI449692,D8Ertd69e,mKIAA1046 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006531406.3 | XP_006531469.1 | OTU domain-containing protein 4 isoform X1 |
NM_001081164.1 | NP_001074633.1 | OTU domain-containing protein 4 isoform 2 |
NM_001256033.1 | NP_001242962.1 | OTU domain-containing protein 4 isoform 1 |
XM_006531406.4 | XP_006531469.1 | OTU domain-containing protein 4 isoform X1 |
OTUD4 | XP_001095354.1 | |
Rattus norvegicus (Norway rat) | Otud4 | NP_001178629.1 |
Pan troglodytes (chimpanzee) | OTUD4 | XP_003310585.1 |
Bos taurus (cattle) | OTUD4 | NP_001230240.1 |
Mus musculus (house mouse) | Otud4 | NP_001074633.1 |
Canis lupus familiaris (dog) | OTUD4 | XP_532680.3 |
Xenopus tropicalis (tropical clawed frog) | otud4 | NP_001072598.1 |
Homo sapiens (human) | OTUD4 | NP_001096123.1 |
Gallus gallus (chicken) | OTUD4 | XP_420427.3 |
Loss of the tumor suppressor BAP1 causes myeloid transformation.
Dey A, Seshasayee D, Noubade R, French DM, Liu J, Chaurushiya MS, Kirkpatrick DS, Pham VC, Lill JR, Bakalarski CE, Wu J, Phu L, Katavolos P, LaFave LM, Abdel-Wahab O, Modrusan Z, Seshagiri S, Dong K, Lin Z, Balazs M, Suriben R, Newton K, Hymowitz S, Garcia-Manero G, Martin F, Levine RL, Dixit VM
Science (New York, N.Y.)337(6101)1541-6(2012 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Otud4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Otud4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu41750 | |
Clone ID Related Accession (Same CDS sequence) | XM_006531406.3 , XM_006531406.4 | |
Accession Version | XM_006531406.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3129bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | OTU domain-containing protein 4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000074.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006531406.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTGTA TCCGCTACCT TCGAGAGAAC AGAGAGAAAT TTGAAGCGTT TATAGAAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006531469.1 |
CDS | 447..3575 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006531406.4 |
1 | ATGGCCTGTA TCCGCTACCT TCGAGAGAAC AGAGAGAAAT TTGAAGCGTT TATAGAAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu01797 | |
Clone ID Related Accession (Same CDS sequence) | NM_001081164.1 | |
Accession Version | NM_001081164.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3321bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-25 | |
Organism | Mus musculus(house mouse) | |
Product | OTU domain-containing protein 4 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC101687.11. On Feb 6, 2007 this sequence version replaced XM_194424.5. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC145259.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849380, SAMN00849381 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGGCAG CCGTCGGCGC GCCCGACGGC GTGGACCAGG GCGGCGTGGG GCCGCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001074633.1 |
CDS | 231..3551 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001081164.1 |
1 | ATGGAGGCAG CCGTCGGCGC GCCCGACGGC GTGGACCAGG GCGGCGTGGG GCCGCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu05845 | |
Clone ID Related Accession (Same CDS sequence) | NM_001256033.1 | |
Accession Version | NM_001256033.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3324bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-27 | |
Organism | Mus musculus(house mouse) | |
Product | OTU domain-containing protein 4 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AW494258.1, BC138373.1 and AC101687.11. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC138373.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849380, SAMN00849381 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGGCAG CCGTCGGCGC GCCCGACGGC GTGGACCAGG GCGGCGTGGG GCCGCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001242962.1 |
CDS | 231..3554 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001256033.1 |
1 | ATGGAGGCAG CCGTCGGCGC GCCCGACGGC GTGGACCAGG GCGGCGTGGG GCCGCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu41750 | |
Clone ID Related Accession (Same CDS sequence) | XM_006531406.3 , XM_006531406.4 | |
Accession Version | XM_006531406.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3129bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | OTU domain-containing protein 4 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000074.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006531406.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTGTA TCCGCTACCT TCGAGAGAAC AGAGAGAAAT TTGAAGCGTT TATAGAAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006531469.1 |
CDS | 439..3567 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006531406.3 |
1 | ATGGCCTGTA TCCGCTACCT TCGAGAGAAC AGAGAGAAAT TTGAAGCGTT TATAGAAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Loss of the tumor suppressor BAP1 causes myeloid transformation. |