Gene Symbol | TTC17 |
Entrez Gene ID | 74569 |
Full Name | tetratricopeptide repeat domain 17 |
Synonyms | 9130020K17Rik,D2Bwg1005e |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
ORF » Species Summary » Mus musculus » TTC17 cDNA ORF clone
Gene Symbol | TTC17 |
Entrez Gene ID | 74569 |
Full Name | tetratricopeptide repeat domain 17 |
Synonyms | 9130020K17Rik,D2Bwg1005e |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(House mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006500312.4 | XP_006500375.1 | tetratricopeptide repeat protein 17 isoform X2 |
NM_001355691.1 | NP_001342620.1 | tetratricopeptide repeat protein 17 isoform 3 |
XM_006500311.3 | XP_006500374.1 | tetratricopeptide repeat protein 17 isoform X2 |
NM_183106.2 | NP_898929.2 | tetratricopeptide repeat protein 17 isoform 1 |
NM_001355690.1 | NP_001342619.1 | tetratricopeptide repeat protein 17 isoform 2 |
XM_006500310.4 | XP_006500373.1 | tetratricopeptide repeat protein 17 isoform X1 |
XM_006500310.3 | XP_006500373.1 | tetratricopeptide repeat protein 17 isoform X1 |
XM_006500312.3 | XP_006500375.1 | tetratricopeptide repeat protein 17 isoform X3 |
XM_017319301.1 | XP_017174790.1 | tetratricopeptide repeat protein 17 isoform X4 |
Pan troglodytes (chimpanzee) | TTC17 | XP_001157497.1 |
TTC17 | XP_001114291.2 | |
Rattus norvegicus (Norway rat) | Ttc17 | NP_001101222.2 |
Mus musculus (house mouse) | Ttc17 | NP_898929.2 |
Xenopus tropicalis (tropical clawed frog) | ttc17 | XP_002937343.2 |
Homo sapiens (human) | TTC17 | NP_060729.2 |
Canis lupus familiaris (dog) | TTC17 | XP_005631153.1 |
Bos taurus (cattle) | TTC17 | NP_001192238.1 |
Gallus gallus (chicken) | TTC17 | XP_421093.4 |
Danio rerio (zebrafish) | ttc17 | XP_698025.5 |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC, Babbitt PC, Ferrin TE
Nucleic acids research31(1)278-81(2003 Jan)
Genetic mapping of 262 loci derived from expressed sequences in a murine interspecific cross using single-strand conformational polymorphism analysis.
Brady KP, Rowe LB, Her H, Stevens TJ, Eppig J, Sussman DJ, Sikela J, Beier DR
Genome research7(11)1085-93(1997 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TTC17 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TTC17 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu30965 | |
Clone ID Related Accession (Same CDS sequence) | XM_006500312.4 , XM_006500312.3 | |
Accession Version | XM_006500312.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2871bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | tetratricopeptide repeat protein 17 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006500312.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006500375.1 |
CDS | 23..2893 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006500312.3 |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu80441 | |
Clone ID Related Accession (Same CDS sequence) | NM_001355691.1 , XM_017319301.1 | |
Accession Version | NM_001355691.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2700bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-05 | |
Organism | Mus musculus(house mouse) | |
Product | tetratricopeptide repeat protein 17 isoform 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL672251.10 and AL683878.9. On Sep 23, 2017 this sequence version replaced XM_017319301.1. Transcript Variant: This variant (3) differs in the 3' UTR and coding sequence and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (3) has a shorter and distinct C-terminus and lacks an alternate internal segment compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660815.113086.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001342620.1 |
CDS | 25..2724 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001355691.1 |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu30965 | |
Clone ID Related Accession (Same CDS sequence) | XM_006500312.4 , XM_006500312.3 | |
Accession Version | XM_006500312.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2871bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | tetratricopeptide repeat protein 17 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006500312.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006500375.1 |
CDS | 46..2916 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006500312.4 |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu80441 | |
Clone ID Related Accession (Same CDS sequence) | NM_001355691.1 , XM_017319301.1 | |
Accession Version | XM_017319301.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2700bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | tetratricopeptide repeat protein 17 isoform X4 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017174790.1 |
CDS | 23..2722 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017319301.1 |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu30963 | |
Clone ID Related Accession (Same CDS sequence) | XM_006500310.4 , XM_006500310.3 | |
Accession Version | XM_006500310.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3474bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | tetratricopeptide repeat protein 17 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006500310.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCATT TATATGTTGA ATATTACAGT GGGAAGGTGG ACTCACCAAT GAACTTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006500373.1 |
CDS | 1555..5028 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006500310.4 |
1 | ATGGATCATT TATATGTTGA ATATTACAGT GGGAAGGTGG ACTCACCAAT GAACTTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu20839 | |
Clone ID Related Accession (Same CDS sequence) | NM_183106.2 | |
Accession Version | NM_183106.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3597bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-07-05 | |
Organism | Mus musculus(house mouse) | |
Product | tetratricopeptide repeat protein 17 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CJ180754.1, CF536785.1, CA328748.1, BY358550.1, AL683878.9, AK038364.1, BE626951.1, AK018641.1 and AI851013.1. On Feb 3, 2007 this sequence version replaced NM_183106.1. Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_898929.2 |
CDS | 25..3621 |
Translation |
Target ORF information:
Target ORF information:
|
NM_183106.2 |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu30964 | |
Clone ID Related Accession (Same CDS sequence) | XM_006500311.3 , NM_001355690.1 | |
Accession Version | NM_001355690.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3426bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-24 | |
Organism | Mus musculus(house mouse) | |
Product | tetratricopeptide repeat protein 17 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL672251.10 and AL683878.9. On Sep 23, 2017 this sequence version replaced XM_006500311.3. Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR1660811.56024.1, SRR1660813.97930.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00849374, SAMN00849375 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001342619.1 |
CDS | 25..3450 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001355690.1 |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu30963 | |
Clone ID Related Accession (Same CDS sequence) | XM_006500310.4 , XM_006500310.3 | |
Accession Version | XM_006500310.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3474bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | tetratricopeptide repeat protein 17 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006500310.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCATT TATATGTTGA ATATTACAGT GGGAAGGTGG ACTCACCAAT GAACTTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006500373.1 |
CDS | 1224..4697 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006500310.3 |
1 | ATGGATCATT TATATGTTGA ATATTACAGT GGGAAGGTGG ACTCACCAAT GAACTTGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu30964 | |
Clone ID Related Accession (Same CDS sequence) | XM_006500311.3 , NM_001355690.1 | |
Accession Version | XM_006500311.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3426bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(House mouse) | |
Product | tetratricopeptide repeat protein 17 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000068.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006500311.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006500374.1 |
CDS | 23..3448 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006500311.3 |
1 | ATGGCGGCGG CAATAGGGGT CCGCGGCCGG TTCGAGCTGC TACCTCGCTC CGGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Genetic mapping of 262 loci derived from expressed sequences in a murine interspecific cross using single-strand conformational polymorphism analysis. |