Gene Symbol
ZKSCAN1
Entrez Gene ID
74570
Full Name
zinc finger with KRAB and SCAN domains 1
Synonyms
5930429A01Rik,9130423L19Rik,9230118B16Rik,AI646829,AI788588,C87323,KOX18,PHZ-37,ZNF139
General protein information
Preferred Nameszinc finger with KRAB and SCAN domains 1
Nameszinc finger protein with KRAB and SCAN domains 1 zinc finger protein 36 (KOX 18)
Gene Type
protein-coding
Organism
Mus musculus(House mouse)
Genome
Chromosome: 5
Map Location: 5|5 G2
mRNA and Protein(s)
mRNA
Protein
Name
XM_011240958.2
XP_011239260.1
zinc finger protein with KRAB and SCAN domains 1 isoform X2
XM_006504628.4
XP_006504691.1
zinc finger protein with KRAB and SCAN domains 1 isoform X1
XM_006504628.3
XP_006504691.1
zinc finger protein with KRAB and SCAN domains 1 isoform X1
NM_029869.1
NP_084145.1
zinc finger protein with KRAB and SCAN domains 1 isoform 2
NM_133906.4
NP_598667.2
zinc finger protein with KRAB and SCAN domains 1 isoform 1
XM_006504628.2
XP_006504691.1
zinc finger protein with KRAB and SCAN domains 1 isoform X1
Mus musculus (house mouse)
Zkscan1
NP_598667.2
Pan troglodytes (chimpanzee)
ZKSCAN1
XP_001144424.1
ZKSCAN1
XP_001099230.1
Rattus norvegicus (Norway rat)
Zkscan1
NP_001020931.1
Canis lupus familiaris (dog)
ZKSCAN1
XP_546967.2
Bos taurus (cattle)
ZKSCAN1
NP_001192439.1
Homo sapiens (human)
ZKSCAN1
NP_003430.1
Related articles in PubMed
Transcription and Signaling Regulators in Developing Neuronal Subtypes of Mouse and Human Enteric Nervous System.
Memic F, Knoflach V, Morarach K, Sadler R, Laranjeira C, Hjerling-Leffler J, Sundstr?m E, Pachnis V, Marklund U Gastroenterology(2017 Oct)
Short intronic repeat sequences facilitate circular RNA production.
Liang D, Wilusz JE Genes & development28(20)2233-47(2014 Oct)
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K, Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A, Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S, Wohnoutka P, Hawrylycz MJ, Puelles L, Jones AR Neuron83(2)309-323(2014 Jul)
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND, Robson P Developmental cell18(4)675-85(2010 Apr)
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S, Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N, Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y, Okado H, Hashimoto M, Asahara H Developmental cell17(6)836-48(2009 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ZKSCAN1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ZKSCAN1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
OMu07596
Clone ID Related Accession (Same CDS sequence)
XM_006504628.4
, XM_006504628.3
, NM_029869.1
, XM_006504628.2
Accession Version
NM_029869.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1467bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-10-17
Organism
Mus musculus(house mouse)
Product
zinc finger protein with KRAB and SCAN domains 1 isoform 2
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY282109.1, BC052441.1 and CAAA01224679.1.
Transcript Variant: This variant (2) differs in the 5' UTR and lacks two alternate exons in the 5' coding region, compared to variant 1. It encodes isoform 2, which lacks an internal in-frame segment and is shorter, compared to isoform 1.
Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
##Evidence-Data-START##
Transcript exon combination :: BC052441.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849381, SAMN00849385 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 ATGATGACTG CTGAGTCAAG GGAAACCACA GGTCTATCCC CACAGGCTGC ACAGGAGAAA GATGGTATAG TTATTGTGAA GGTAGAAGAA GAAGATGAAG AAGACCACAT GTGGGGGCAG GACTCTAGCC TGCAGGAGAC ACCACCACCC GACCCAGAGG TATTCCGCCA ACGGTTCAGG CGCTTCTGTT ACCAGAACAC TTTTGGGCCT CGAGAAGCTT TGAATCGACT AAAGGAACTT TGTCATCAGT GGCTCCGACC AGAAGTCAAC AGCAAGGAAC AGATCTTGGA GCTGTTGGTA CTGGAGCAGT TCCTGTCCAT CCTGCCCAAA GAGCTGCAAG TCTGGCTGCA GGAGTACCGG CCTGACAGTG GGGAAGAGGC CGTGACTCTT CTAGAAGACT TGGAACTTGA TCTATCGGGA CAGCAGGTCC CAGGTCAAGT TCATGGGCCT GAGATGCTTG CCAGGGGTGT GGTGCCTCTG GATCCAGTTC AGGAGTCCTC AAGCTTTGAC CATCATGAAA CTGCCCAGTC TCATTTCAAG CATTCATCTA GGAAGCCTCG TCTCTTATCC CGAGGCTCTG AGAACAGGAA TGGGAATGAG TCAACCTCAA AGGCTGAAGT CAAAGAAGAT TCCACCTCAC ATGGGGAGAT AGCAGGGAGA TTCCAGAAGG AATTTGGAGA GAAACGGGAA CAGCAGGGCA GAGTAGTCGA AAGGCAACAG AAAAATCCTG AAGAGAAAAC TGGCAAAGAA AAGAAAGAGC CTGGGCCACC TACAGCCAAG GAAAAAAAGC CCAGCACAGG AGAGCGGGGC CCGCGGGAGA AGGGTAAAGG TCTGGGGAGA AGCTTTAGCC TGAGCGCAAA CTTTAATAAC ACCCCAGAGG AGGCTCCGTC GGGAGCAAAG ACTCACAGAT GCGATGAGTG TGGGAAATGT TTCACAAGAA GCTCAAGCCT TATCCGCCAT AAAATCATCC ACACTGGAGA GAAACCCTAC GAATGTAACG AGTGTGGCAA AGCCTTCAGT CTCAATTCAA ACCTTGTCCT TCATCAGCGA ATCCACACGG GAGAGAAACC TCATGAATGT AACGAGTGTG GCAAAGCCTT CAGCCATAGC TCAAATCTCA TCCTGCACCA GCGCATCCAC TCTGGAGAGA AGCCCTATGA ATGTAACGAG TGTGGCAAAG CCTTCAGCCA GAGCTCAGAC CTCACGAAGC ACCAGAGAAT CCATACAGGA GAGAAGCCCT ATGAATGTAG CGAATGTGGA AAAGCTTTCA ACCGAAACTC ATACCTTATT TTGCATCGGA GAATTCACAC CCGAGAAAAG CCCTACAAGT GCACTAAGTG TGGCAAGGCC TTCACCCGGA GCTCGACCCT CACACTGCAC CACAGAATCC ATGCCAGAGA GAGAACGTCA GAATACAGCC CAGCCTCTCT GGATGCCTTT GGGGCATTCC TGAAAAGTTG TGTGTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_084145.1
CDS 230..1696
Translation
Target ORF information:
RefSeq Version NM_029869.1
Organism Mus musculus(house mouse)
Definition Mus musculus zinc finger with KRAB and SCAN domains 1 (Zkscan1), transcript variant 2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_029869.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 ATGATGACTG CTGAGTCAAG GGAAACCACA GGTCTATCCC CACAGGCTGC ACAGGAGAAA GATGGTATAG TTATTGTGAA GGTAGAAGAA GAAGATGAAG AAGACCACAT GTGGGGGCAG GACTCTAGCC TGCAGGAGAC ACCACCACCC GACCCAGAGG TATTCCGCCA ACGGTTCAGG CGCTTCTGTT ACCAGAACAC TTTTGGGCCT CGAGAAGCTT TGAATCGACT AAAGGAACTT TGTCATCAGT GGCTCCGACC AGAAGTCAAC AGCAAGGAAC AGATCTTGGA GCTGTTGGTA CTGGAGCAGT TCCTGTCCAT CCTGCCCAAA GAGCTGCAAG TCTGGCTGCA GGAGTACCGG CCTGACAGTG GGGAAGAGGC CGTGACTCTT CTAGAAGACT TGGAACTTGA TCTATCGGGA CAGCAGGTCC CAGGTCAAGT TCATGGGCCT GAGATGCTTG CCAGGGGTGT GGTGCCTCTG GATCCAGTTC AGGAGTCCTC AAGCTTTGAC CATCATGAAA CTGCCCAGTC TCATTTCAAG CATTCATCTA GGAAGCCTCG TCTCTTATCC CGAGGCTCTG AGAACAGGAA TGGGAATGAG TCAACCTCAA AGGCTGAAGT CAAAGAAGAT TCCACCTCAC ATGGGGAGAT AGCAGGGAGA TTCCAGAAGG AATTTGGAGA GAAACGGGAA CAGCAGGGCA GAGTAGTCGA AAGGCAACAG AAAAATCCTG AAGAGAAAAC TGGCAAAGAA AAGAAAGAGC CTGGGCCACC TACAGCCAAG GAAAAAAAGC CCAGCACAGG AGAGCGGGGC CCGCGGGAGA AGGGTAAAGG TCTGGGGAGA AGCTTTAGCC TGAGCGCAAA CTTTAATAAC ACCCCAGAGG AGGCTCCGTC GGGAGCAAAG ACTCACAGAT GCGATGAGTG TGGGAAATGT TTCACAAGAA GCTCAAGCCT TATCCGCCAT AAAATCATCC ACACTGGAGA GAAACCCTAC GAATGTAACG AGTGTGGCAA AGCCTTCAGT CTCAATTCAA ACCTTGTCCT TCATCAGCGA ATCCACACGG GAGAGAAACC TCATGAATGT AACGAGTGTG GCAAAGCCTT CAGCCATAGC TCAAATCTCA TCCTGCACCA GCGCATCCAC TCTGGAGAGA AGCCCTATGA ATGTAACGAG TGTGGCAAAG CCTTCAGCCA GAGCTCAGAC CTCACGAAGC ACCAGAGAAT CCATACAGGA GAGAAGCCCT ATGAATGTAG CGAATGTGGA AAAGCTTTCA ACCGAAACTC ATACCTTATT TTGCATCGGA GAATTCACAC CCGAGAAAAG CCCTACAAGT GCACTAAGTG TGGCAAGGCC TTCACCCGGA GCTCGACCCT CACACTGCAC CACAGAATCC ATGCCAGAGA GAGAACGTCA GAATACAGCC CAGCCTCTCT GGATGCCTTT GGGGCATTCC TGAAAAGTTG TGTGTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu07596
Clone ID Related Accession (Same CDS sequence)
XM_006504628.4
, XM_006504628.3
, NM_029869.1
, XM_006504628.2
Accession Version
XM_006504628.4 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1467bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-08-07
Organism
Mus musculus(house mouse)
Product
zinc finger protein with KRAB and SCAN domains 1 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Aug 8, 2019 this sequence version replaced XM_006504628.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 ATGATGACTG CTGAGTCAAG GGAAACCACA GGTCTATCCC CACAGGCTGC ACAGGAGAAA GATGGTATAG TTATTGTGAA GGTAGAAGAA GAAGATGAAG AAGACCACAT GTGGGGGCAG GACTCTAGCC TGCAGGAGAC ACCACCACCC GACCCAGAGG TATTCCGCCA ACGGTTCAGG CGCTTCTGTT ACCAGAACAC TTTTGGGCCT CGAGAAGCTT TGAATCGACT AAAGGAACTT TGTCATCAGT GGCTCCGACC AGAAGTCAAC AGCAAGGAAC AGATCTTGGA GCTGTTGGTA CTGGAGCAGT TCCTGTCCAT CCTGCCCAAA GAGCTGCAAG TCTGGCTGCA GGAGTACCGG CCTGACAGTG GGGAAGAGGC CGTGACTCTT CTAGAAGACT TGGAACTTGA TCTATCGGGA CAGCAGGTCC CAGGTCAAGT TCATGGGCCT GAGATGCTTG CCAGGGGTGT GGTGCCTCTG GATCCAGTTC AGGAGTCCTC AAGCTTTGAC CATCATGAAA CTGCCCAGTC TCATTTCAAG CATTCATCTA GGAAGCCTCG TCTCTTATCC CGAGGCTCTG AGAACAGGAA TGGGAATGAG TCAACCTCAA AGGCTGAAGT CAAAGAAGAT TCCACCTCAC ATGGGGAGAT AGCAGGGAGA TTCCAGAAGG AATTTGGAGA GAAACGGGAA CAGCAGGGCA GAGTAGTCGA AAGGCAACAG AAAAATCCTG AAGAGAAAAC TGGCAAAGAA AAGAAAGAGC CTGGGCCACC TACAGCCAAG GAAAAAAAGC CCAGCACAGG AGAGCGGGGC CCGCGGGAGA AGGGTAAAGG TCTGGGGAGA AGCTTTAGCC TGAGCGCAAA CTTTAATAAC ACCCCAGAGG AGGCTCCGTC GGGAGCAAAG ACTCACAGAT GCGATGAGTG TGGGAAATGT TTCACAAGAA GCTCAAGCCT TATCCGCCAT AAAATCATCC ACACTGGAGA GAAACCCTAC GAATGTAACG AGTGTGGCAA AGCCTTCAGT CTCAATTCAA ACCTTGTCCT TCATCAGCGA ATCCACACGG GAGAGAAACC TCATGAATGT AACGAGTGTG GCAAAGCCTT CAGCCATAGC TCAAATCTCA TCCTGCACCA GCGCATCCAC TCTGGAGAGA AGCCCTATGA ATGTAACGAG TGTGGCAAAG CCTTCAGCCA GAGCTCAGAC CTCACGAAGC ACCAGAGAAT CCATACAGGA GAGAAGCCCT ATGAATGTAG CGAATGTGGA AAAGCTTTCA ACCGAAACTC ATACCTTATT TTGCATCGGA GAATTCACAC CCGAGAAAAG CCCTACAAGT GCACTAAGTG TGGCAAGGCC TTCACCCGGA GCTCGACCCT CACACTGCAC CACAGAATCC ATGCCAGAGA GAGAACGTCA GAATACAGCC CAGCCTCTCT GGATGCCTTT GGGGCATTCC TGAAAAGTTG TGTGTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006504691.1
CDS 270..1736
Translation
Target ORF information:
RefSeq Version XM_006504628.4
Organism Mus musculus(house mouse)
Definition Mus musculus zinc finger with KRAB and SCAN domains 1 (Zkscan1), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006504628.4
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 ATGATGACTG CTGAGTCAAG GGAAACCACA GGTCTATCCC CACAGGCTGC ACAGGAGAAA GATGGTATAG TTATTGTGAA GGTAGAAGAA GAAGATGAAG AAGACCACAT GTGGGGGCAG GACTCTAGCC TGCAGGAGAC ACCACCACCC GACCCAGAGG TATTCCGCCA ACGGTTCAGG CGCTTCTGTT ACCAGAACAC TTTTGGGCCT CGAGAAGCTT TGAATCGACT AAAGGAACTT TGTCATCAGT GGCTCCGACC AGAAGTCAAC AGCAAGGAAC AGATCTTGGA GCTGTTGGTA CTGGAGCAGT TCCTGTCCAT CCTGCCCAAA GAGCTGCAAG TCTGGCTGCA GGAGTACCGG CCTGACAGTG GGGAAGAGGC CGTGACTCTT CTAGAAGACT TGGAACTTGA TCTATCGGGA CAGCAGGTCC CAGGTCAAGT TCATGGGCCT GAGATGCTTG CCAGGGGTGT GGTGCCTCTG GATCCAGTTC AGGAGTCCTC AAGCTTTGAC CATCATGAAA CTGCCCAGTC TCATTTCAAG CATTCATCTA GGAAGCCTCG TCTCTTATCC CGAGGCTCTG AGAACAGGAA TGGGAATGAG TCAACCTCAA AGGCTGAAGT CAAAGAAGAT TCCACCTCAC ATGGGGAGAT AGCAGGGAGA TTCCAGAAGG AATTTGGAGA GAAACGGGAA CAGCAGGGCA GAGTAGTCGA AAGGCAACAG AAAAATCCTG AAGAGAAAAC TGGCAAAGAA AAGAAAGAGC CTGGGCCACC TACAGCCAAG GAAAAAAAGC CCAGCACAGG AGAGCGGGGC CCGCGGGAGA AGGGTAAAGG TCTGGGGAGA AGCTTTAGCC TGAGCGCAAA CTTTAATAAC ACCCCAGAGG AGGCTCCGTC GGGAGCAAAG ACTCACAGAT GCGATGAGTG TGGGAAATGT TTCACAAGAA GCTCAAGCCT TATCCGCCAT AAAATCATCC ACACTGGAGA GAAACCCTAC GAATGTAACG AGTGTGGCAA AGCCTTCAGT CTCAATTCAA ACCTTGTCCT TCATCAGCGA ATCCACACGG GAGAGAAACC TCATGAATGT AACGAGTGTG GCAAAGCCTT CAGCCATAGC TCAAATCTCA TCCTGCACCA GCGCATCCAC TCTGGAGAGA AGCCCTATGA ATGTAACGAG TGTGGCAAAG CCTTCAGCCA GAGCTCAGAC CTCACGAAGC ACCAGAGAAT CCATACAGGA GAGAAGCCCT ATGAATGTAG CGAATGTGGA AAAGCTTTCA ACCGAAACTC ATACCTTATT TTGCATCGGA GAATTCACAC CCGAGAAAAG CCCTACAAGT GCACTAAGTG TGGCAAGGCC TTCACCCGGA GCTCGACCCT CACACTGCAC CACAGAATCC ATGCCAGAGA GAGAACGTCA GAATACAGCC CAGCCTCTCT GGATGCCTTT GGGGCATTCC TGAAAAGTTG TGTGTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu07596
Clone ID Related Accession (Same CDS sequence)
XM_006504628.4
, XM_006504628.3
, NM_029869.1
, XM_006504628.2
Accession Version
XM_006504628.3
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1467bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-06-21
Organism
Mus musculus(house mouse)
Product
zinc finger protein with KRAB and SCAN domains 1 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_006504628.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Mus musculus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 ATGATGACTG CTGAGTCAAG GGAAACCACA GGTCTATCCC CACAGGCTGC ACAGGAGAAA GATGGTATAG TTATTGTGAA GGTAGAAGAA GAAGATGAAG AAGACCACAT GTGGGGGCAG GACTCTAGCC TGCAGGAGAC ACCACCACCC GACCCAGAGG TATTCCGCCA ACGGTTCAGG CGCTTCTGTT ACCAGAACAC TTTTGGGCCT CGAGAAGCTT TGAATCGACT AAAGGAACTT TGTCATCAGT GGCTCCGACC AGAAGTCAAC AGCAAGGAAC AGATCTTGGA GCTGTTGGTA CTGGAGCAGT TCCTGTCCAT CCTGCCCAAA GAGCTGCAAG TCTGGCTGCA GGAGTACCGG CCTGACAGTG GGGAAGAGGC CGTGACTCTT CTAGAAGACT TGGAACTTGA TCTATCGGGA CAGCAGGTCC CAGGTCAAGT TCATGGGCCT GAGATGCTTG CCAGGGGTGT GGTGCCTCTG GATCCAGTTC AGGAGTCCTC AAGCTTTGAC CATCATGAAA CTGCCCAGTC TCATTTCAAG CATTCATCTA GGAAGCCTCG TCTCTTATCC CGAGGCTCTG AGAACAGGAA TGGGAATGAG TCAACCTCAA AGGCTGAAGT CAAAGAAGAT TCCACCTCAC ATGGGGAGAT AGCAGGGAGA TTCCAGAAGG AATTTGGAGA GAAACGGGAA CAGCAGGGCA GAGTAGTCGA AAGGCAACAG AAAAATCCTG AAGAGAAAAC TGGCAAAGAA AAGAAAGAGC CTGGGCCACC TACAGCCAAG GAAAAAAAGC CCAGCACAGG AGAGCGGGGC CCGCGGGAGA AGGGTAAAGG TCTGGGGAGA AGCTTTAGCC TGAGCGCAAA CTTTAATAAC ACCCCAGAGG AGGCTCCGTC GGGAGCAAAG ACTCACAGAT GCGATGAGTG TGGGAAATGT TTCACAAGAA GCTCAAGCCT TATCCGCCAT AAAATCATCC ACACTGGAGA GAAACCCTAC GAATGTAACG AGTGTGGCAA AGCCTTCAGT CTCAATTCAA ACCTTGTCCT TCATCAGCGA ATCCACACGG GAGAGAAACC TCATGAATGT AACGAGTGTG GCAAAGCCTT CAGCCATAGC TCAAATCTCA TCCTGCACCA GCGCATCCAC TCTGGAGAGA AGCCCTATGA ATGTAACGAG TGTGGCAAAG CCTTCAGCCA GAGCTCAGAC CTCACGAAGC ACCAGAGAAT CCATACAGGA GAGAAGCCCT ATGAATGTAG CGAATGTGGA AAAGCTTTCA ACCGAAACTC ATACCTTATT TTGCATCGGA GAATTCACAC CCGAGAAAAG CCCTACAAGT GCACTAAGTG TGGCAAGGCC TTCACCCGGA GCTCGACCCT CACACTGCAC CACAGAATCC ATGCCAGAGA GAGAACGTCA GAATACAGCC CAGCCTCTCT GGATGCCTTT GGGGCATTCC TGAAAAGTTG TGTGTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006504691.1
CDS 245..1711
Translation
Target ORF information:
RefSeq Version XM_006504628.3
Organism Mus musculus(house mouse)
Definition Mus musculus zinc finger with KRAB and SCAN domains 1 (Zkscan1), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006504628.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 ATGATGACTG CTGAGTCAAG GGAAACCACA GGTCTATCCC CACAGGCTGC ACAGGAGAAA GATGGTATAG TTATTGTGAA GGTAGAAGAA GAAGATGAAG AAGACCACAT GTGGGGGCAG GACTCTAGCC TGCAGGAGAC ACCACCACCC GACCCAGAGG TATTCCGCCA ACGGTTCAGG CGCTTCTGTT ACCAGAACAC TTTTGGGCCT CGAGAAGCTT TGAATCGACT AAAGGAACTT TGTCATCAGT GGCTCCGACC AGAAGTCAAC AGCAAGGAAC AGATCTTGGA GCTGTTGGTA CTGGAGCAGT TCCTGTCCAT CCTGCCCAAA GAGCTGCAAG TCTGGCTGCA GGAGTACCGG CCTGACAGTG GGGAAGAGGC CGTGACTCTT CTAGAAGACT TGGAACTTGA TCTATCGGGA CAGCAGGTCC CAGGTCAAGT TCATGGGCCT GAGATGCTTG CCAGGGGTGT GGTGCCTCTG GATCCAGTTC AGGAGTCCTC AAGCTTTGAC CATCATGAAA CTGCCCAGTC TCATTTCAAG CATTCATCTA GGAAGCCTCG TCTCTTATCC CGAGGCTCTG AGAACAGGAA TGGGAATGAG TCAACCTCAA AGGCTGAAGT CAAAGAAGAT TCCACCTCAC ATGGGGAGAT AGCAGGGAGA TTCCAGAAGG AATTTGGAGA GAAACGGGAA CAGCAGGGCA GAGTAGTCGA AAGGCAACAG AAAAATCCTG AAGAGAAAAC TGGCAAAGAA AAGAAAGAGC CTGGGCCACC TACAGCCAAG GAAAAAAAGC CCAGCACAGG AGAGCGGGGC CCGCGGGAGA AGGGTAAAGG TCTGGGGAGA AGCTTTAGCC TGAGCGCAAA CTTTAATAAC ACCCCAGAGG AGGCTCCGTC GGGAGCAAAG ACTCACAGAT GCGATGAGTG TGGGAAATGT TTCACAAGAA GCTCAAGCCT TATCCGCCAT AAAATCATCC ACACTGGAGA GAAACCCTAC GAATGTAACG AGTGTGGCAA AGCCTTCAGT CTCAATTCAA ACCTTGTCCT TCATCAGCGA ATCCACACGG GAGAGAAACC TCATGAATGT AACGAGTGTG GCAAAGCCTT CAGCCATAGC TCAAATCTCA TCCTGCACCA GCGCATCCAC TCTGGAGAGA AGCCCTATGA ATGTAACGAG TGTGGCAAAG CCTTCAGCCA GAGCTCAGAC CTCACGAAGC ACCAGAGAAT CCATACAGGA GAGAAGCCCT ATGAATGTAG CGAATGTGGA AAAGCTTTCA ACCGAAACTC ATACCTTATT TTGCATCGGA GAATTCACAC CCGAGAAAAG CCCTACAAGT GCACTAAGTG TGGCAAGGCC TTCACCCGGA GCTCGACCCT CACACTGCAC CACAGAATCC ATGCCAGAGA GAGAACGTCA GAATACAGCC CAGCCTCTCT GGATGCCTTT GGGGCATTCC TGAAAAGTTG TGTGTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 ATGATGACTG CTGAGTCAAG GGAAACCACA GGTCTATCCC CACAGGCTGC ACAGGAGAAA GATGGTATAG TTATTGTGAA GGTAGAAGAA GAAGATGAAG AAGACCACAT GTGGGGGCAG GACTCTAGCC TGCAGGAGAC ACCACCACCC GACCCAGAGG TATTCCGCCA ACGGTTCAGG CGCTTCTGTT ACCAGAACAC TTTTGGGCCT CGAGAAGCTT TGAATCGACT AAAGGAACTT TGTCATCAGT GGCTCCGACC AGAAGTCAAC AGCAAGGAAC AGATCTTGGA GCTGTTGGTA CTGGAGCAGT TCCTGTCCAT CCTGCCCAAA GAGCTGCAAG TCTGGCTGCA GGAGTACCGG CCTGACAGTG GGGAAGAGGC CGTGACTCTT CTAGAAGACT TGGAACTTGA TCTATCGGGA CAGCAGGTCC CAGGTCAAGT TCATGGGCCT GAGATGCTTG CCAGGGGTGT GGTGCCTCTG GATCCAGTTC AGGAGTCCTC AAGCTTTGAC CATCATGAAA CTGCCCAGTC TCATTTCAAG CATTCATCTA GGAAGCCTCG TCTCTTATCC CGAGGCTCTG AGAACAGGAA TGGGAATGAG TCAACCTCAA AGGCTGAAGT CAAAGAAGAT TCCACCTCAC ATGGGGAGAT AGCAGGGAGA TTCCAGAAGG AATTTGGAGA GAAACGGGAA CAGCAGGGCA GAGTAGTCGA AAGGCAACAG AAAAATCCTG AAGAGAAAAC TGGCAAAGAA AAGAAAGAGC CTGGGCCACC TACAGCCAAG GAAAAAAAGC CCAGCACAGG AGAGCGGGGC CCGCGGGAGA AGGGTAAAGG TCTGGGGAGA AGCTTTAGCC TGAGCGCAAA CTTTAATAAC ACCCCAGAGG AGGCTCCGTC GGGAGCAAAG ACTCACAGAT GCGATGAGTG TGGGAAATGT TTCACAAGAA GCTCAAGCCT TATCCGCCAT AAAATCATCC ACACTGGAGA GAAACCCTAC GAATGTAACG AGTGTGGCAA AGCCTTCAGT CTCAATTCAA ACCTTGTCCT TCATCAGCGA ATCCACACGG GAGAGAAACC TCATGAATGT AACGAGTGTG GCAAAGCCTT CAGCCATAGC TCAAATCTCA TCCTGCACCA GCGCATCCAC TCTGGAGAGA AGCCCTATGA ATGTAACGAG TGTGGCAAAG CCTTCAGCCA GAGCTCAGAC CTCACGAAGC ACCAGAGAAT CCATACAGGA GAGAAGCCCT ATGAATGTAG CGAATGTGGA AAAGCTTTCA ACCGAAACTC ATACCTTATT TTGCATCGGA GAATTCACAC CCGAGAAAAG CCCTACAAGT GCACTAAGTG TGGCAAGGCC TTCACCCGGA GCTCGACCCT CACACTGCAC CACAGAATCC ATGCCAGAGA GAGAACGTCA GAATACAGCC CAGCCTCTCT GGATGCCTTT GGGGCATTCC TGAAAAGTTG TGTGTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006504691.1
Translation
Target ORF information:
RefSeq Version XM_006504628.2
Organism Mus musculus(House mouse)
Definition Mus musculus zinc finger with KRAB and SCAN domains 1 (Zkscan1), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006504628.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 ATGATGACTG CTGAGTCAAG GGAAACCACA GGTCTATCCC CACAGGCTGC ACAGGAGAAA GATGGTATAG TTATTGTGAA GGTAGAAGAA GAAGATGAAG AAGACCACAT GTGGGGGCAG GACTCTAGCC TGCAGGAGAC ACCACCACCC GACCCAGAGG TATTCCGCCA ACGGTTCAGG CGCTTCTGTT ACCAGAACAC TTTTGGGCCT CGAGAAGCTT TGAATCGACT AAAGGAACTT TGTCATCAGT GGCTCCGACC AGAAGTCAAC AGCAAGGAAC AGATCTTGGA GCTGTTGGTA CTGGAGCAGT TCCTGTCCAT CCTGCCCAAA GAGCTGCAAG TCTGGCTGCA GGAGTACCGG CCTGACAGTG GGGAAGAGGC CGTGACTCTT CTAGAAGACT TGGAACTTGA TCTATCGGGA CAGCAGGTCC CAGGTCAAGT TCATGGGCCT GAGATGCTTG CCAGGGGTGT GGTGCCTCTG GATCCAGTTC AGGAGTCCTC AAGCTTTGAC CATCATGAAA CTGCCCAGTC TCATTTCAAG CATTCATCTA GGAAGCCTCG TCTCTTATCC CGAGGCTCTG AGAACAGGAA TGGGAATGAG TCAACCTCAA AGGCTGAAGT CAAAGAAGAT TCCACCTCAC ATGGGGAGAT AGCAGGGAGA TTCCAGAAGG AATTTGGAGA GAAACGGGAA CAGCAGGGCA GAGTAGTCGA AAGGCAACAG AAAAATCCTG AAGAGAAAAC TGGCAAAGAA AAGAAAGAGC CTGGGCCACC TACAGCCAAG GAAAAAAAGC CCAGCACAGG AGAGCGGGGC CCGCGGGAGA AGGGTAAAGG TCTGGGGAGA AGCTTTAGCC TGAGCGCAAA CTTTAATAAC ACCCCAGAGG AGGCTCCGTC GGGAGCAAAG ACTCACAGAT GCGATGAGTG TGGGAAATGT TTCACAAGAA GCTCAAGCCT TATCCGCCAT AAAATCATCC ACACTGGAGA GAAACCCTAC GAATGTAACG AGTGTGGCAA AGCCTTCAGT CTCAATTCAA ACCTTGTCCT TCATCAGCGA ATCCACACGG GAGAGAAACC TCATGAATGT AACGAGTGTG GCAAAGCCTT CAGCCATAGC TCAAATCTCA TCCTGCACCA GCGCATCCAC TCTGGAGAGA AGCCCTATGA ATGTAACGAG TGTGGCAAAG CCTTCAGCCA GAGCTCAGAC CTCACGAAGC ACCAGAGAAT CCATACAGGA GAGAAGCCCT ATGAATGTAG CGAATGTGGA AAAGCTTTCA ACCGAAACTC ATACCTTATT TTGCATCGGA GAATTCACAC CCGAGAAAAG CCCTACAAGT GCACTAAGTG TGGCAAGGCC TTCACCCGGA GCTCGACCCT CACACTGCAC CACAGAATCC ATGCCAGAGA GAGAACGTCA GAATACAGCC CAGCCTCTCT GGATGCCTTT GGGGCATTCC TGAAAAGTTG TGTGTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu10341
Clone ID Related Accession (Same CDS sequence)
NM_133906.4
Accession Version
NM_133906.4 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1686bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-10-18
Organism
Mus musculus(house mouse)
Product
zinc finger protein with KRAB and SCAN domains 1 isoform 1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY282109.1, AK036807.1, AK054323.1 and CAAA01224679.1. On Jul 1, 2005 this sequence version replaced NM_133906.3.
Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
##Evidence-Data-START##
Transcript exon combination :: AK154831.1, AK036807.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849379 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 ATGATGACTG CTGAGTCAAG GGAAACCACA GGTCTATCCC CACAGGCTGC ACAGGAGAAA GATGGTATAG TTATTGTGAA GGTAGAAGAA GAAGATGAAG AAGACCACAT GTGGGGGCAG GACTCTAGCC TGCAGGAGAC ACCACCACCC GACCCAGAGG TATTCCGCCA ACGGTTCAGG CGCTTCTGTT ACCAGAACAC TTTTGGGCCT CGAGAAGCTT TGAATCGACT AAAGGAACTT TGTCATCAGT GGCTCCGACC AGAAGTCAAC AGCAAGGAAC AGATCTTGGA GCTGTTGGTA CTGGAGCAGT TCCTGTCCAT CCTGCCCAAA GAGCTGCAAG TCTGGCTGCA GGAGTACCGG CCTGACAGTG GGGAAGAGGC CGTGACTCTT CTAGAAGACT TGGAACTTGA TCTATCGGGA CAGCAGGTCC CAGGTCAAGT TCATGGGCCT GAGATGCTTG CCAGGGGTGT GGTGCCTCTG GATCCAGTTC AGGAGTCCTC AAGCTTTGAC CATCATGAAA CTGCCCAGTC TCATTTCAAG CATTCATCTA GGAAGCCTCG TCTCTTATCC CGAGCTCTCC CTGCCACCCA TGTTCCTGCC CCTCATCATG AGGGGAATCC CAGAGACCAG GCGATGGCAT CTGCACTATT GACCGCAGAT TCCCAGGCAA TGGTGAAGAT CGAGGACATG GCCGTGTCCC TCATCCTGGA GGAATGGGGA TGTCAGAACC TGGCTCGGAG GAATCTCAAT AGGGACAGCA GGCAGATGAA TTTGGGGAAT GTGTTTTCCC AGGGCTCTGA GAACAGGAAT GGGAATGAGT CAACCTCAAA GGCTGAAGTC AAAGAAGATT CCACCTCACA TGGGGAGATA GCAGGGAGAT TCCAGAAGGA ATTTGGAGAG AAACGGGAAC AGCAGGGCAG AGTAGTCGAA AGGCAACAGA AAAATCCTGA AGAGAAAACT GGCAAAGAAA AGAAAGAGCC TGGGCCACCT ACAGCCAAGG AAAAAAAGCC CAGCACAGGA GAGCGGGGCC CGCGGGAGAA GGGTAAAGGT CTGGGGAGAA GCTTTAGCCT GAGCGCAAAC TTTAATAACA CCCCAGAGGA GGCTCCGTCG GGAGCAAAGA CTCACAGATG CGATGAGTGT GGGAAATGTT TCACAAGAAG CTCAAGCCTT ATCCGCCATA AAATCATCCA CACTGGAGAG AAACCCTACG AATGTAACGA GTGTGGCAAA GCCTTCAGTC TCAATTCAAA CCTTGTCCTT CATCAGCGAA TCCACACGGG AGAGAAACCT CATGAATGTA ACGAGTGTGG CAAAGCCTTC AGCCATAGCT CAAATCTCAT CCTGCACCAG CGCATCCACT CTGGAGAGAA GCCCTATGAA TGTAACGAGT GTGGCAAAGC CTTCAGCCAG AGCTCAGACC TCACGAAGCA CCAGAGAATC CATACAGGAG AGAAGCCCTA TGAATGTAGC GAATGTGGAA AAGCTTTCAA CCGAAACTCA TACCTTATTT TGCATCGGAG AATTCACACC CGAGAAAAGC CCTACAAGTG CACTAAGTGT GGCAAGGCCT TCACCCGGAG CTCGACCCTC ACACTGCACC ACAGAATCCA TGCCAGAGAG AGAACGTCAG AATACAGCCC AGCCTCTCTG GATGCCTTTG GGGCATTCCT GAAAAGTTGT GTGTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_598667.2
CDS 236..1921
Translation
Target ORF information:
RefSeq Version NM_133906.4
Organism Mus musculus(house mouse)
Definition Mus musculus zinc finger with KRAB and SCAN domains 1 (Zkscan1), transcript variant 1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_133906.4
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 ATGATGACTG CTGAGTCAAG GGAAACCACA GGTCTATCCC CACAGGCTGC ACAGGAGAAA GATGGTATAG TTATTGTGAA GGTAGAAGAA GAAGATGAAG AAGACCACAT GTGGGGGCAG GACTCTAGCC TGCAGGAGAC ACCACCACCC GACCCAGAGG TATTCCGCCA ACGGTTCAGG CGCTTCTGTT ACCAGAACAC TTTTGGGCCT CGAGAAGCTT TGAATCGACT AAAGGAACTT TGTCATCAGT GGCTCCGACC AGAAGTCAAC AGCAAGGAAC AGATCTTGGA GCTGTTGGTA CTGGAGCAGT TCCTGTCCAT CCTGCCCAAA GAGCTGCAAG TCTGGCTGCA GGAGTACCGG CCTGACAGTG GGGAAGAGGC CGTGACTCTT CTAGAAGACT TGGAACTTGA TCTATCGGGA CAGCAGGTCC CAGGTCAAGT TCATGGGCCT GAGATGCTTG CCAGGGGTGT GGTGCCTCTG GATCCAGTTC AGGAGTCCTC AAGCTTTGAC CATCATGAAA CTGCCCAGTC TCATTTCAAG CATTCATCTA GGAAGCCTCG TCTCTTATCC CGAGCTCTCC CTGCCACCCA TGTTCCTGCC CCTCATCATG AGGGGAATCC CAGAGACCAG GCGATGGCAT CTGCACTATT GACCGCAGAT TCCCAGGCAA TGGTGAAGAT CGAGGACATG GCCGTGTCCC TCATCCTGGA GGAATGGGGA TGTCAGAACC TGGCTCGGAG GAATCTCAAT AGGGACAGCA GGCAGATGAA TTTGGGGAAT GTGTTTTCCC AGGGCTCTGA GAACAGGAAT GGGAATGAGT CAACCTCAAA GGCTGAAGTC AAAGAAGATT CCACCTCACA TGGGGAGATA GCAGGGAGAT TCCAGAAGGA ATTTGGAGAG AAACGGGAAC AGCAGGGCAG AGTAGTCGAA AGGCAACAGA AAAATCCTGA AGAGAAAACT GGCAAAGAAA AGAAAGAGCC TGGGCCACCT ACAGCCAAGG AAAAAAAGCC CAGCACAGGA GAGCGGGGCC CGCGGGAGAA GGGTAAAGGT CTGGGGAGAA GCTTTAGCCT GAGCGCAAAC TTTAATAACA CCCCAGAGGA GGCTCCGTCG GGAGCAAAGA CTCACAGATG CGATGAGTGT GGGAAATGTT TCACAAGAAG CTCAAGCCTT ATCCGCCATA AAATCATCCA CACTGGAGAG AAACCCTACG AATGTAACGA GTGTGGCAAA GCCTTCAGTC TCAATTCAAA CCTTGTCCTT CATCAGCGAA TCCACACGGG AGAGAAACCT CATGAATGTA ACGAGTGTGG CAAAGCCTTC AGCCATAGCT CAAATCTCAT CCTGCACCAG CGCATCCACT CTGGAGAGAA GCCCTATGAA TGTAACGAGT GTGGCAAAGC CTTCAGCCAG AGCTCAGACC TCACGAAGCA CCAGAGAATC CATACAGGAG AGAAGCCCTA TGAATGTAGC GAATGTGGAA AAGCTTTCAA CCGAAACTCA TACCTTATTT TGCATCGGAG AATTCACACC CGAGAAAAGC CCTACAAGTG CACTAAGTGT GGCAAGGCCT TCACCCGGAG CTCGACCCTC ACACTGCACC ACAGAATCCA TGCCAGAGAG AGAACGTCAG AATACAGCCC AGCCTCTCTG GATGCCTTTG GGGCATTCCT GAAAAGTTGT GTGTAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
OMu71197
Clone ID Related Accession (Same CDS sequence)
XM_011240958.2
Accession Version
XM_011240958.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1053bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-08-07
Organism
Mus musculus(house mouse)
Product
zinc finger protein with KRAB and SCAN domains 1 isoform X2
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jun 22, 2016 this sequence version replaced XM_011240958.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Mus musculus Annotation Release 108
Annotation Version :: 108
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 ATGGCATCTG CACTATTGAC CGCAGATTCC CAGGCAATGG TGAAGATCGA GGACATGGCC GTGTCCCTCA TCCTGGAGGA ATGGGGATGT CAGAACCTGG CTCGGAGGAA TCTCAATAGG GACAGCAGGC AGATGAATTT GGGGAATGTG TTTTCCCAGG GCTCTGAGAA CAGGAATGGG AATGAGTCAA CCTCAAAGGC TGAAGTCAAA GAAGATTCCA CCTCACATGG GGAGATAGCA GGGAGATTCC AGAAGGAATT TGGAGAGAAA CGGGAACAGC AGGGCAGAGT AGTCGAAAGG CAACAGAAAA ATCCTGAAGA GAAAACTGGC AAAGAAAAGA AAGAGCCTGG GCCACCTACA GCCAAGGAAA AAAAGCCCAG CACAGGAGAG CGGGGCCCGC GGGAGAAGGG TAAAGGTCTG GGGAGAAGCT TTAGCCTGAG CGCAAACTTT AATAACACCC CAGAGGAGGC TCCGTCGGGA GCAAAGACTC ACAGATGCGA TGAGTGTGGG AAATGTTTCA CAAGAAGCTC AAGCCTTATC CGCCATAAAA TCATCCACAC TGGAGAGAAA CCCTACGAAT GTAACGAGTG TGGCAAAGCC TTCAGTCTCA ATTCAAACCT TGTCCTTCAT CAGCGAATCC ACACGGGAGA GAAACCTCAT GAATGTAACG AGTGTGGCAA AGCCTTCAGC CATAGCTCAA ATCTCATCCT GCACCAGCGC ATCCACTCTG GAGAGAAGCC CTATGAATGT AACGAGTGTG GCAAAGCCTT CAGCCAGAGC TCAGACCTCA CGAAGCACCA GAGAATCCAT ACAGGAGAGA AGCCCTATGA ATGTAGCGAA TGTGGAAAAG CTTTCAACCG AAACTCATAC CTTATTTTGC ATCGGAGAAT TCACACCCGA GAAAAGCCCT ACAAGTGCAC TAAGTGTGGC AAGGCCTTCA CCCGGAGCTC GACCCTCACA CTGCACCACA GAATCCATGC CAGAGAGAGA ACGTCAGAAT ACAGCCCAGC CTCTCTGGAT GCCTTTGGGG CATTCCTGAA AAGTTGTGTG TAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_011239260.1
CDS 150..1202
Translation
Target ORF information:
RefSeq Version XM_011240958.2
Organism Mus musculus(house mouse)
Definition Mus musculus zinc finger with KRAB and SCAN domains 1 (Zkscan1), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_011240958.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 ATGGCATCTG CACTATTGAC CGCAGATTCC CAGGCAATGG TGAAGATCGA GGACATGGCC GTGTCCCTCA TCCTGGAGGA ATGGGGATGT CAGAACCTGG CTCGGAGGAA TCTCAATAGG GACAGCAGGC AGATGAATTT GGGGAATGTG TTTTCCCAGG GCTCTGAGAA CAGGAATGGG AATGAGTCAA CCTCAAAGGC TGAAGTCAAA GAAGATTCCA CCTCACATGG GGAGATAGCA GGGAGATTCC AGAAGGAATT TGGAGAGAAA CGGGAACAGC AGGGCAGAGT AGTCGAAAGG CAACAGAAAA ATCCTGAAGA GAAAACTGGC AAAGAAAAGA AAGAGCCTGG GCCACCTACA GCCAAGGAAA AAAAGCCCAG CACAGGAGAG CGGGGCCCGC GGGAGAAGGG TAAAGGTCTG GGGAGAAGCT TTAGCCTGAG CGCAAACTTT AATAACACCC CAGAGGAGGC TCCGTCGGGA GCAAAGACTC ACAGATGCGA TGAGTGTGGG AAATGTTTCA CAAGAAGCTC AAGCCTTATC CGCCATAAAA TCATCCACAC TGGAGAGAAA CCCTACGAAT GTAACGAGTG TGGCAAAGCC TTCAGTCTCA ATTCAAACCT TGTCCTTCAT CAGCGAATCC ACACGGGAGA GAAACCTCAT GAATGTAACG AGTGTGGCAA AGCCTTCAGC CATAGCTCAA ATCTCATCCT GCACCAGCGC ATCCACTCTG GAGAGAAGCC CTATGAATGT AACGAGTGTG GCAAAGCCTT CAGCCAGAGC TCAGACCTCA CGAAGCACCA GAGAATCCAT ACAGGAGAGA AGCCCTATGA ATGTAGCGAA TGTGGAAAAG CTTTCAACCG AAACTCATAC CTTATTTTGC ATCGGAGAAT TCACACCCGA GAAAAGCCCT ACAAGTGCAC TAAGTGTGGC AAGGCCTTCA CCCGGAGCTC GACCCTCACA CTGCACCACA GAATCCATGC CAGAGAGAGA ACGTCAGAAT ACAGCCCAGC CTCTCTGGAT GCCTTTGGGG CATTCCTGAA AAGTTGTGTG TAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Neuron83(2)309-323(2014 Jul)
Thompson CL,Ng L,Menon V,Martinez S,Lee CK,Glattfelder K,Sunkin SM,Henry A,Lau C,Dang C,Garcia-Lopez R,Martinez-Ferre A,Pombero A,Rubenstein JLR,Wakeman WB,Hohmann J,Dee N,Sodt AJ,Young R,Smith K,Nguyen TN,Kidney J,Kuan L,Jeromin A,Kaykas A,Miller J,Page D,Orta G,Bernard A,Riley Z,Smith S,Wohnoutka P,Hawrylycz MJ,Puelles L,Jones AR
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Developmental cell17(6)836-48(2009 Dec)
Yokoyama S,Ito Y,Ueno-Kudoh H,Shimizu H,Uchibe K,Albini S,Mitsuoka K,Miyaki S,Kiso M,Nagai A,Hikata T,Osada T,Fukuda N,Yamashita S,Harada D,Mezzano V,Kasai M,Puri PL,Hayashizaki Y,Okado H,Hashimoto M,Asahara H