Gene Symbol | Arfip2 |
Entrez Gene ID | 76932 |
Full Name | ADP-ribosylation factor interacting protein 2 |
Synonyms | 2310002N04Rik,POR,Por1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Arfip2 cDNA ORF clone
Gene Symbol | Arfip2 |
Entrez Gene ID | 76932 |
Full Name | ADP-ribosylation factor interacting protein 2 |
Synonyms | 2310002N04Rik,POR,Por1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_011241939.1 | XP_011240241.1 | arfaptin-2 isoform X3 |
NM_029802.4 | NP_084078.3 | arfaptin-2 |
XM_006508317.2 | XP_006508380.1 | arfaptin-2 isoform X1 |
XM_006508318.1 | XP_006508381.1 | arfaptin-2 isoform X2 |
XM_006508317.3 | XP_006508380.1 | arfaptin-2 isoform X1 |
XM_006508319.1 | XP_006508382.1 | arfaptin-2 isoform X2 |
Pan troglodytes (chimpanzee) | ARFIP2 | XP_003951865.1 |
Bos taurus (cattle) | ARFIP2 | NP_001029649.1 |
Mus musculus (house mouse) | Arfip2 | NP_084078.3 |
Danio rerio (zebrafish) | arfip2b | NP_001017649.1 |
Drosophila melanogaster (fruit fly) | CG17184 | NP_650058.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004910 | XP_315001.3 |
Canis lupus familiaris (dog) | ARFIP2 | XP_005633665.1 |
Rattus norvegicus (Norway rat) | Arfip2 | NP_001004222.1 |
Homo sapiens (human) | ARFIP2 | NP_001229783.1 |
Gallus gallus (chicken) | ARFIP2 | XP_004939022.1 |
ARFIP2 | XP_002799716.1 | |
Caenorhabditis elegans (roundworm) | F54C8.7 | NP_871661.1 |
High-throughput discovery of novel developmental phenotypes.
Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, , , , , , , , , MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bu?an M, Murray SA
Nature537(7621)508-514(2016 09)
Geometry sensing through POR1 regulates Rac1 activity controlling early osteoblast differentiation in response to nanofiber diameter.
Higgins AM, Banik BL, Brown JL
Integrative biology : quantitative biosciences from nano to macro7(2)229-36(2015 Feb)
Interaction assays in yeast and cultured cells confirm known and identify novel partners of the synaptic vesicle protein synaptophysin.
Felkl M, Leube RE
Neuroscience156(2)344-52(2008 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Highest level of Rac1 activation was achieved on the smallest nanofibers, a trend that was lost in POR1 knockdown. This supports the hypothesis that on small nanofibers, POR1 binds to highly curved cell membranes, allowing Rac1 to dissociate and activate.
Title: Geometry sensing through POR1 regulates Rac1 activity controlling early osteoblast differentiation in response to nanofiber diameter.
The following Arfip2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Arfip2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu39941 | |
Clone ID Related Accession (Same CDS sequence) | XM_006508317.2 , XM_006508317.3 | |
Accession Version | XM_006508317.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 804bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | arfaptin-2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006508317.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACGGACG GGATTCTAGG GAAGGCAGCC ACAATGGAGA TTCCCATCCA CGGAAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006508380.1 |
CDS | 129..932 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006508317.2 |
1 | ATGACGGACG GGATTCTAGG GAAGGCAGCC ACAATGGAGA TTCCCATCCA CGGAAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu39942 | |
Clone ID Related Accession (Same CDS sequence) | XM_006508318.1 | |
Accession Version | XM_006508318.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 702bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | arfaptin-2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACGGACG GGATTCTAGG GAAGGCAGCC ACAATGGAGA TTCCCATCCA CGGAAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006508381.1 |
CDS | 157..858 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006508318.1 |
1 | ATGACGGACG GGATTCTAGG GAAGGCAGCC ACAATGGAGA TTCCCATCCA CGGAAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu39943 | |
Clone ID Related Accession (Same CDS sequence) | XM_006508319.1 | |
Accession Version | XM_006508319.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 609bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | arfaptin-2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACGGACG GGATTCTAGG GAAGGCAGCC ACAATGGAGA TTCCCATCCA CGGAAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006508382.1 |
CDS | 184..792 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006508319.1 |
1 | ATGACGGACG GGATTCTAGG GAAGGCAGCC ACAATGGAGA TTCCCATCCA CGGAAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu71593 | |
Clone ID Related Accession (Same CDS sequence) | XM_011241939.1 | |
Accession Version | XM_011241939.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 771bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | arfaptin-2 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACTAG CATTGTGTCT GGTGGCTATG GGGGCTCTGG TGACGGACTC ATCCCCACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011240241.1 |
CDS | 1..771 |
Translation |
Target ORF information:
Target ORF information:
|
XM_011241939.1 |
1 | ATGAAACTAG CATTGTGTCT GGTGGCTATG GGGGCTCTGG TGACGGACTC ATCCCCACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu07503 | |
Clone ID Related Accession (Same CDS sequence) | NM_029802.4 | |
Accession Version | NM_029802.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-19 | |
Organism | Mus musculus(house mouse) | |
Product | arfaptin-2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY203177.1, AK009100.1, BU583325.1 and AC125227.6. On Apr 29, 2009 this sequence version replaced NM_029802.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK154772.1, AK009100.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849380, SAMN01164138 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGACGGACG GGATTCTAGG GAAGGCAGCC ACAATGGAGA TTCCCATCCA CGGAAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_084078.3 |
CDS | 215..1240 |
Translation |
Target ORF information:
Target ORF information:
|
NM_029802.4 |
1 | ATGACGGACG GGATTCTAGG GAAGGCAGCC ACAATGGAGA TTCCCATCCA CGGAAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu39941 | |
Clone ID Related Accession (Same CDS sequence) | XM_006508317.2 , XM_006508317.3 | |
Accession Version | XM_006508317.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 804bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | arfaptin-2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000073.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006508317.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACGGACG GGATTCTAGG GAAGGCAGCC ACAATGGAGA TTCCCATCCA CGGAAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006508380.1 |
CDS | 210..1013 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006508317.3 |
1 | ATGACGGACG GGATTCTAGG GAAGGCAGCC ACAATGGAGA TTCCCATCCA CGGAAATGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
High-throughput discovery of novel developmental phenotypes. |
Geometry sensing through POR1 regulates Rac1 activity controlling early osteoblast differentiation in response to nanofiber diameter. |
Interaction assays in yeast and cultured cells confirm known and identify novel partners of the synaptic vesicle protein synaptophysin. |