Gene Symbol | Yipf6 |
Entrez Gene ID | 77929 |
Full Name | Yip1 domain family, member 6 |
Synonyms | A430107J06Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
ORF » Species Summary » Mus musculus » Yipf6 cDNA ORF clone
gRNAs
Gene Symbol | Yipf6 |
Entrez Gene ID | 77929 |
Full Name | Yip1 domain family, member 6 |
Synonyms | A430107J06Rik |
General protein information |
|
Gene Type | protein-coding |
Organism | Mus musculus(house mouse) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006528337.3 | XP_006528400.1 | protein YIPF6 isoform X3 |
XM_006528338.2 | XP_006528401.1 | protein YIPF6 isoform X1 |
XM_006528337.2 | XP_006528400.1 | protein YIPF6 isoform X3 |
NM_207633.2 | NP_997516.1 | protein YIPF6 |
XM_006528339.4 | XP_006528402.2 | protein YIPF6 isoform X2 |
XM_006528339.3 | XP_006528402.2 | protein YIPF6 isoform X2 |
XM_006528339.2 | XP_006528402.1 | protein YIPF6 isoform X1 |
XM_006528338.3 | XP_006528401.2 | protein YIPF6 isoform X1 |
XM_006528338.4 | XP_006528401.2 | protein YIPF6 isoform X1 |
Homo sapiens (human) | YIPF6 | NP_776195.2 |
Canis lupus familiaris (dog) | YIPF6 | XP_549051.2 |
Danio rerio (zebrafish) | yipf6 | NP_001002096.1 |
Xenopus tropicalis (tropical clawed frog) | yipf6 | NP_001015932.1 |
Rattus norvegicus (Norway rat) | Yipf6 | NP_001020918.1 |
Gallus gallus (chicken) | YIPF6 | XP_420160.3 |
Drosophila melanogaster (fruit fly) | CG3652 | NP_608828.2 |
Bos taurus (cattle) | YIPF6 | NP_001094676.1 |
Mus musculus (house mouse) | Yipf6 | NP_997516.1 |
Oryza sativa (rice) | Os05g0437500 | NP_001055653.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008226 | XP_317244.3 |
Caenorhabditis elegans (roundworm) | W02D9.2 | NP_001251924.1 |
Schizosaccharomyces pombe (fission yeast) | SPAC644.13c | NP_593881.1 |
Arabidopsis thaliana (thale cress) | AT2G18840 | NP_565442.1 |
Pan troglodytes (chimpanzee) | YIPF6 | XP_521102.1 |
LOC713477 | XP_001102832.2 | |
Arabidopsis thaliana (thale cress) | AT4G30260 | NP_567843.1 |
Oryza sativa (rice) | Os01g0867700 | NP_001044915.1 |
Yip1 domain family, member 6 (Yipf6) mutation induces spontaneous intestinal inflammation in mice.
Brandl K, Tomisato W, Li X, Neppl C, Pirie E, Falk W, Xia Y, Moresco EM, Baccala R, Theofilopoulos AN, Schnabl B, Beutler B
Proceedings of the National Academy of Sciences of the United States of America109(31)12650-5(2012 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
a tissue- and organ-specific function for Yipf6 in the maintenance of intestinal homeostasis and implicate the orthologous human gene as a disease susceptibility locus.
Title: Yip1 domain family, member 6 (Yipf6) mutation induces spontaneous intestinal inflammation in mice.
The following Yipf6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Yipf6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMu56404 | |
Clone ID Related Accession (Same CDS sequence) | XM_006528337.3 , XM_006528337.2 | |
Accession Version | XM_006528337.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | protein YIPF6 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 9, 2015 this sequence version replaced XM_006528337.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGTTTC GCAGAGACGC ATGGGAGGGG AGCAGTTGGA GGTTTATCAA GATGGCGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006528400.1 |
CDS | 21..782 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGGTTTC GCAGAGACGC ATGGGAGGGG AGCAGTTGGA GGTTTATCAA GATGGCGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10056 | |
Clone ID Related Accession (Same CDS sequence) | XM_006528338.2 , NM_207633.2 , XM_006528339.2 | |
Accession Version | NM_207633.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 711bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-10 | |
Organism | Mus musculus(house mouse) | |
Product | protein YIPF6 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BB642656.1, AK030473.1 and AL672103.10. On Sep 26, 2005 this sequence version replaced NM_207633.1. ##Evidence-Data-START## Transcript exon combination :: SRR1660821.175723.1, SRR1660817.262325.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGCGGAAG CGGAGGACTC TCCGGGAGAA CAGGAGGCAG CGGCATCCAA GCCCCTGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_997516.1 |
CDS | 452..1162 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGGAAG CGGAGGACTC TCCGGGAGAA CAGGAGGCAG CGGCATCCAA GCCCCTGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10056 | |
Clone ID Related Accession (Same CDS sequence) | XM_006528338.2 , NM_207633.2 , XM_006528339.2 | |
Accession Version | XM_006528338.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 711bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-02-08 | |
Organism | Mus musculus(House mouse) | |
Product | protein YIPF6 isoform X1 | |
Comment |
1 | ATGGCGGAAG CGGAGGACTC TCCGGGAGAA CAGGAGGCAG CGGCATCCAA GCCCCTGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006528401.1 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCGGAAG CGGAGGACTC TCCGGGAGAA CAGGAGGCAG CGGCATCCAA GCCCCTGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu10056 | |
Clone ID Related Accession (Same CDS sequence) | XM_006528338.2 , NM_207633.2 , XM_006528339.2 | |
Accession Version | XM_006528339.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 711bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-02-08 | |
Organism | Mus musculus(House mouse) | |
Product | protein YIPF6 isoform X1 | |
Comment |
1 | ATGGCGGAAG CGGAGGACTC TCCGGGAGAA CAGGAGGCAG CGGCATCCAA GCCCCTGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006528402.1 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCGGAAG CGGAGGACTC TCCGGGAGAA CAGGAGGCAG CGGCATCCAA GCCCCTGTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu56404 | |
Clone ID Related Accession (Same CDS sequence) | XM_006528337.3 , XM_006528337.2 | |
Accession Version | XM_006528337.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | protein YIPF6 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006528337.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGTTTC GCAGAGACGC ATGGGAGGGG AGCAGTTGGA GGTTTATCAA GATGGCGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006528400.1 |
CDS | 26..787 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGGTTTC GCAGAGACGC ATGGGAGGGG AGCAGTTGGA GGTTTATCAA GATGGCGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83196 | |
Clone ID Related Accession (Same CDS sequence) | XM_006528338.3 , XM_006528338.4 | |
Accession Version | XM_006528338.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1263bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | protein YIPF6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006528338.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTAG TTGGGCGCGT TTTGGATCCA CAGTGCTCCG CTTTGCTCCG CAGTGGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006528401.2 |
CDS | 383..1645 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTCCTAG TTGGGCGCGT TTTGGATCCA CAGTGCTCCG CTTTGCTCCG CAGTGGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83197 | |
Clone ID Related Accession (Same CDS sequence) | XM_006528339.4 , XM_006528339.3 | |
Accession Version | XM_006528339.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1212bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-08-07 | |
Organism | Mus musculus(house mouse) | |
Product | protein YIPF6 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 8, 2019 this sequence version replaced XM_006528339.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mus musculus Annotation Release 108 Annotation Version :: 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTAG TTGGGCGCGT TTTGGATCCA CAGTGCTCCG CTTTGCTCCG CAGTGGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006528402.2 |
CDS | 383..1594 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTCCTAG TTGGGCGCGT TTTGGATCCA CAGTGCTCCG CTTTGCTCCG CAGTGGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83196 | |
Clone ID Related Accession (Same CDS sequence) | XM_006528338.3 , XM_006528338.4 | |
Accession Version | XM_006528338.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1263bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | protein YIPF6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006528338.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTAG TTGGGCGCGT TTTGGATCCA CAGTGCTCCG CTTTGCTCCG CAGTGGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006528401.2 |
CDS | 96..1358 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTCCTAG TTGGGCGCGT TTTGGATCCA CAGTGCTCCG CTTTGCTCCG CAGTGGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMu83197 | |
Clone ID Related Accession (Same CDS sequence) | XM_006528339.4 , XM_006528339.3 | |
Accession Version | XM_006528339.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1212bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-21 | |
Organism | Mus musculus(house mouse) | |
Product | protein YIPF6 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000086.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006528339.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mus musculus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTAG TTGGGCGCGT TTTGGATCCA CAGTGCTCCG CTTTGCTCCG CAGTGGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006528402.2 |
CDS | 96..1307 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTCCTAG TTGGGCGCGT TTTGGATCCA CAGTGCTCCG CTTTGCTCCG CAGTGGCGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Yip1 domain family, member 6 (Yipf6) mutation induces spontaneous intestinal inflammation in mice. |