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LOC4343617 cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice)

Summary

Gene Symbol LOC4343617
Entrez Gene ID 4343617
Full Name secretory carrier-associated membrane protein 1
Synonyms OJ1112_E08.118,OsJ_023796,SCAMP1
Gene Type protein-coding
Organism Oryza sativa Japonica Group(Japanese rice)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_015789328.1 XP_015644814.1 secretory carrier-associated membrane protein 1
XM_015789328.2 XP_015644814.1 secretory carrier-associated membrane protein 1

Pathways from BioSystems


Homologies


Gallus gallus (chicken) SCAMP2 XP_001233172.2
Arabidopsis thaliana (thale cress) AT2G20840 NP_179680.1
Pan troglodytes (chimpanzee) SCAMP2 XP_001135846.2
Arabidopsis thaliana (thale cress) AT1G03550 NP_563686.1
Oryza sativa (rice) Os01g0780500 NP_001044437.1
Mus musculus (house mouse) Scamp2 NP_073724.1
Rattus norvegicus (Norway rat) Scamp2 NP_076445.1
Oryza sativa (rice) Os07g0564600 NP_001060004.1
Homo sapiens (human) SCAMP2 NP_005688.2
Canis lupus familiaris (dog) SCAMP2 XP_544777.2
Bos taurus (cattle) SCAMP2 NP_001095640.1
Danio rerio (zebrafish) scamp2l NP_957488.1
Arabidopsis thaliana (thale cress) AT1G11180 NP_001184960.1
SCAMP2 XP_001098273.2
Danio rerio (zebrafish) scamp2 NP_998543.1
Arabidopsis thaliana (thale cress) SC3 NP_176320.1
Oryza sativa (rice) Os05g0503000 NP_001055977.1
Xenopus tropicalis (tropical clawed frog) scamp2 NP_001001223.1

Gene Ontology

The following LOC4343617 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4343617 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OOa16188 XM_015789328.2
Latest version!		 Oryza sativa Japonica Group secretory carrier-associated membrane protein 1-like (LOC4343617), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
View Old Accession Versions >>
OOa16188 XM_015789328.1 Oryza sativa Japonica Group secretory carrier-associated membrane protein 1 (LOC4343617), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OOa16188
Clone ID Related Accession (Same CDS sequence) XM_015789328.1 , XM_015789328.2
Accession Version XM_015789328.1 Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 921bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-02-29
Organism Oryza sativa Japonica Group(Japanese rice)
Product secretory carrier-associated membrane protein 1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379180.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGCGGGGC GCTACGACAG CAACCCCTTC GAGGAGGACG ACGTGAACCC TTTCTCGGAA 
CAAGCGCGTG GTAAGGCTGG AGGGCAGCCC AGCTATGGCG GCGGCGCGTT CTACATGCCG 
AATCCACGGA ATGTGCCTTC TGTGTCGTCG AATTCGCGGC TTTCGCCTCT TCCCCCTGAG 
CCCGCAGCTT TTGGGGCTAC GGTGGATATC CCTCTTGACT CTTCCAAGGA CCTGAAGAAT 
AGGGAAAAGG AGCTGCAAGC TAGGGAAGCG GAATTGAACA AGAGGGAGAA GGAGCTAAAA 
AGGAGGGAGG AGGCTGCAGC GCGAGCTGGT ATTGTCATTG AGGAGAAAAA CTGGCCTCCA 
TTTCTGCCAC TCATCCATCA TGATATCACC AATGAGATAC CGAGTCACCT TCAAAGAATG 
CAATATGTTG CATTTGCATC ATTTCTTGGA TTGGCTTGCT GTCTCTTCTG GAACGTCATA 
GCAGTTACTT CAGCTTGGGT CAAGGGGGAA GGCGTGAAGA TATGGTTGCT GGCAATCATC 
TACTTCATCT CTGGGGTTCC TGGTGCATAT GTTTTATGGT ATCGACCTCT GTATAATGCT 
ATGAGGACTG ATAGTGCCTT GAAGTTTGGA TTGTTCTTCT TGGTTTACCT GTTCCATATT 
CTTTTCTGTG TATTTTCTGC TGTGGCTCCT CCTGTTGTCT TCGAGGGGAA ATCATTGGCG 
GGGATTTTAC CAGCAATTGA TCTCATCAGC AAGAATGCTT TGGTGGGGAT CTTCTACTTT 
GTTGGATTTG GATTGTTCTG CGTCGAATCA TTGCTCAGCA TCTGGGTTAT CCAGCAAGTG 
TACATGTACT TCCGAGGAAG TGGAAAAGCT GCTGAGATGA AGCGTGATGC AACTAGGGGT 
GCTATGCGGG CAGCTTTTTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_015644814.1
CDS296..1216
Translation

Target ORF information:

RefSeq Version XM_015789328.1
Organism Oryza sativa Japonica Group(Japanese rice)
Definition Oryza sativa Japonica Group secretory carrier-associated membrane protein 1 (LOC4343617), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_015789328.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGCGGGGC GCTACGACAG CAACCCCTTC GAGGAGGACG ACGTGAACCC TTTCTCGGAA 
CAAGCGCGTG GTAAGGCTGG AGGGCAGCCC AGCTATGGCG GCGGCGCGTT CTACATGCCG 
AATCCACGGA ATGTGCCTTC TGTGTCGTCG AATTCGCGGC TTTCGCCTCT TCCCCCTGAG 
CCCGCAGCTT TTGGGGCTAC GGTGGATATC CCTCTTGACT CTTCCAAGGA CCTGAAGAAT 
AGGGAAAAGG AGCTGCAAGC TAGGGAAGCG GAATTGAACA AGAGGGAGAA GGAGCTAAAA 
AGGAGGGAGG AGGCTGCAGC GCGAGCTGGT ATTGTCATTG AGGAGAAAAA CTGGCCTCCA 
TTTCTGCCAC TCATCCATCA TGATATCACC AATGAGATAC CGAGTCACCT TCAAAGAATG 
CAATATGTTG CATTTGCATC ATTTCTTGGA TTGGCTTGCT GTCTCTTCTG GAACGTCATA 
GCAGTTACTT CAGCTTGGGT CAAGGGGGAA GGCGTGAAGA TATGGTTGCT GGCAATCATC 
TACTTCATCT CTGGGGTTCC TGGTGCATAT GTTTTATGGT ATCGACCTCT GTATAATGCT 
ATGAGGACTG ATAGTGCCTT GAAGTTTGGA TTGTTCTTCT TGGTTTACCT GTTCCATATT 
CTTTTCTGTG TATTTTCTGC TGTGGCTCCT CCTGTTGTCT TCGAGGGGAA ATCATTGGCG 
GGGATTTTAC CAGCAATTGA TCTCATCAGC AAGAATGCTT TGGTGGGGAT CTTCTACTTT 
GTTGGATTTG GATTGTTCTG CGTCGAATCA TTGCTCAGCA TCTGGGTTAT CCAGCAAGTG 
TACATGTACT TCCGAGGAAG TGGAAAAGCT GCTGAGATGA AGCGTGATGC AACTAGGGGT 
GCTATGCGGG CAGCTTTTTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OOa16188
Clone ID Related Accession (Same CDS sequence) XM_015789328.1 , XM_015789328.2
Accession Version XM_015789328.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 921bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-08-06
Organism Oryza sativa Japonica Group(Japanese rice)
Product secretory carrier-associated membrane protein 1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029262.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015789328.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGCGGGGC GCTACGACAG CAACCCCTTC GAGGAGGACG ACGTGAACCC TTTCTCGGAA 
CAAGCGCGTG GTAAGGCTGG AGGGCAGCCC AGCTATGGCG GCGGCGCGTT CTACATGCCG 
AATCCACGGA ATGTGCCTTC TGTGTCGTCG AATTCGCGGC TTTCGCCTCT TCCCCCTGAG 
CCCGCAGCTT TTGGGGCTAC GGTGGATATC CCTCTTGACT CTTCCAAGGA CCTGAAGAAT 
AGGGAAAAGG AGCTGCAAGC TAGGGAAGCG GAATTGAACA AGAGGGAGAA GGAGCTAAAA 
AGGAGGGAGG AGGCTGCAGC GCGAGCTGGT ATTGTCATTG AGGAGAAAAA CTGGCCTCCA 
TTTCTGCCAC TCATCCATCA TGATATCACC AATGAGATAC CGAGTCACCT TCAAAGAATG 
CAATATGTTG CATTTGCATC ATTTCTTGGA TTGGCTTGCT GTCTCTTCTG GAACGTCATA 
GCAGTTACTT CAGCTTGGGT CAAGGGGGAA GGCGTGAAGA TATGGTTGCT GGCAATCATC 
TACTTCATCT CTGGGGTTCC TGGTGCATAT GTTTTATGGT ATCGACCTCT GTATAATGCT 
ATGAGGACTG ATAGTGCCTT GAAGTTTGGA TTGTTCTTCT TGGTTTACCT GTTCCATATT 
CTTTTCTGTG TATTTTCTGC TGTGGCTCCT CCTGTTGTCT TCGAGGGGAA ATCATTGGCG 
GGGATTTTAC CAGCAATTGA TCTCATCAGC AAGAATGCTT TGGTGGGGAT CTTCTACTTT 
GTTGGATTTG GATTGTTCTG CGTCGAATCA TTGCTCAGCA TCTGGGTTAT CCAGCAAGTG 
TACATGTACT TCCGAGGAAG TGGAAAAGCT GCTGAGATGA AGCGTGATGC AACTAGGGGT 
GCTATGCGGG CAGCTTTTTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_015644814.1
CDS296..1216
Translation

Target ORF information:

RefSeq Version XM_015789328.2
Organism Oryza sativa Japonica Group(Japanese rice)
Definition Oryza sativa Japonica Group secretory carrier-associated membrane protein 1-like (LOC4343617), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_015789328.2

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
ATGGCGGGGC GCTACGACAG CAACCCCTTC GAGGAGGACG ACGTGAACCC TTTCTCGGAA 
CAAGCGCGTG GTAAGGCTGG AGGGCAGCCC AGCTATGGCG GCGGCGCGTT CTACATGCCG 
AATCCACGGA ATGTGCCTTC TGTGTCGTCG AATTCGCGGC TTTCGCCTCT TCCCCCTGAG 
CCCGCAGCTT TTGGGGCTAC GGTGGATATC CCTCTTGACT CTTCCAAGGA CCTGAAGAAT 
AGGGAAAAGG AGCTGCAAGC TAGGGAAGCG GAATTGAACA AGAGGGAGAA GGAGCTAAAA 
AGGAGGGAGG AGGCTGCAGC GCGAGCTGGT ATTGTCATTG AGGAGAAAAA CTGGCCTCCA 
TTTCTGCCAC TCATCCATCA TGATATCACC AATGAGATAC CGAGTCACCT TCAAAGAATG 
CAATATGTTG CATTTGCATC ATTTCTTGGA TTGGCTTGCT GTCTCTTCTG GAACGTCATA 
GCAGTTACTT CAGCTTGGGT CAAGGGGGAA GGCGTGAAGA TATGGTTGCT GGCAATCATC 
TACTTCATCT CTGGGGTTCC TGGTGCATAT GTTTTATGGT ATCGACCTCT GTATAATGCT 
ATGAGGACTG ATAGTGCCTT GAAGTTTGGA TTGTTCTTCT TGGTTTACCT GTTCCATATT 
CTTTTCTGTG TATTTTCTGC TGTGGCTCCT CCTGTTGTCT TCGAGGGGAA ATCATTGGCG 
GGGATTTTAC CAGCAATTGA TCTCATCAGC AAGAATGCTT TGGTGGGGAT CTTCTACTTT 
GTTGGATTTG GATTGTTCTG CGTCGAATCA TTGCTCAGCA TCTGGGTTAT CCAGCAAGTG 
TACATGTACT TCCGAGGAAG TGGAAAAGCT GCTGAGATGA AGCGTGATGC AACTAGGGGT 
GCTATGCGGG CAGCTTTTTA A

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed