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DFFA cDNA ORF clone, Macaca mulatta(Rhesus monkey)

Summary

Gene Symbol DFFA
Entrez Gene ID 713544
Full Name DNA fragmentation factor subunit alpha
Gene Type protein-coding
Organism Macaca mulatta(Rhesus monkey)

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001260683.1 NP_001247612.1 DNA fragmentation factor subunit alpha
XM_028844810.1 XP_028700643.1 DNA fragmentation factor subunit alpha isoform X1

Pathways from BioSystems


Homologies


Rattus norvegicus (Norway rat) Dffa NP_446131.2
Gallus gallus (chicken) DFFA XP_417610.1
Bos taurus (cattle) DFFA NP_001068810.1
DFFA XP_001102195.1
Canis lupus familiaris (dog) DFFA XP_544574.2
Danio rerio (zebrafish) dffa NP_001002631.1
Homo sapiens (human) DFFA NP_004392.1
Pan troglodytes (chimpanzee) DFFA XP_001161941.1
Mus musculus (house mouse) Dffa NP_001020467.1
Xenopus tropicalis (tropical clawed frog) dffa XP_002939454.2

Gene Ontology


Bibliography

Related articles in PubMed

A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following DFFA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DFFA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMb02732 NM_001260683.1
Latest version!		 Macaca mulatta DNA fragmentation factor subunit alpha (DFFA), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $174.30
$249.00
OMb58460 XM_028844810.1
Latest version!		 Macaca mulatta DNA fragmentation factor subunit alpha (DFFA), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 9-11 $139.30
$199.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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2-4 Clone 40% OFF
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID OMb02732
Clone ID Related Accession (Same CDS sequence) NM_001260683.1
Accession Version NM_001260683.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 996bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-04-27
Organism Macaca mulatta(Rhesus monkey)
Product DNA fragmentation factor subunit alpha
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JU474525.1. On May 10, 2012 this sequence version replaced XM_001102195.2. ##Evidence-Data-START## Transcript exon combination :: JU474525.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4688315, SAMEA4688316 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGGAAGTGA CCGGGGACGC CGGGGTACCA GAATCTGGCG AGATCCGGAC TCTAAAGCCG 
TGTCTGCTGC GCCGCAACCA CAGCCGCGAA CAGCACGGCG TGGCCGCCTC CTGCCTCGAA 
GACCTGAGGA GCAAGGCCTG TGACATTCTG GCCATTGATA AGTCCCTGAC ACCAGTCACC 
CTGGTCCTGG CAGAGGATGG CACCATAGTG GATGATGACG ATTACTTTCT GTGTCTACCT 
TCCAATACTA AGTTTGTGGC GTTGGCCAAT AATGAGAAAT GGGCCTACAA CAATTCAGAT 
GGAGGTACAG CTTGGATTTC CCAAGAGTCC TTTGATGTAG ATGAAACAGA CAGGGGAGCA 
GGGTTGAAGT GGAAGAATGT GGCCAGGCAG CTGAAAGAAG ATCTGTCCAG CATCATCCTC 
CTCTCAGAGG AAGACCTCCA GATGCTTGTT GACGCTCCCT GCGCAGACCT GGCTCAGGAA 
CTACTCCAGA GTTGTGCCAC TGTCCAGCAG CTGCAGCACA CACTCCAACA AGTGCTTGAC 
CAAAGAGAGG AAGTGCGTCA GTCCAAGCAG CTCCTGCAGC TGTACCTCGA GGCTTTGGAG 
AAAGAGGGCA GCCTCTTGTC AAAGCAGGAA GAGTCCAAAG CCGCCTTGGG TGAGGAGGCA 
GATGCAGTAG ACACGGGCAT CAGTAGAGAG GCCTCCTCGG ACGTCACGCT GGCGAGCCAC 
ATCCTTACTG CACTGAGGGA GAAGCCGGCT CCAGAGCTGA GCTTATCTAG TCAGGATTTG 
GAGTTGGTTA CCAGGGAAGA CCCCAAAGCA CTGGCTGTTG CTTTGAACTG GGACATAAGG 
AAGACGGAGA CTGTTCAAGA GGCCTGTGAG CGGGAGCTCG CCCTGCGCCT GCAGCAGATG 
CAGAGCTTGC ATTCCCTCCG GAGCATCTCG GCAAGGAAGG CCTCACCACC TGGAGAACGG 
CAAAATCCTA AGCGAGCCAA ACAGAAGCCC ACATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001247612.1
CDS74..1069
Translation

Target ORF information:

RefSeq Version NM_001260683.1
Organism Macaca mulatta(Rhesus monkey)
Definition Macaca mulatta DNA fragmentation factor subunit alpha (DFFA), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001260683.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
ATGGAAGTGA CCGGGGACGC CGGGGTACCA GAATCTGGCG AGATCCGGAC TCTAAAGCCG 
TGTCTGCTGC GCCGCAACCA CAGCCGCGAA CAGCACGGCG TGGCCGCCTC CTGCCTCGAA 
GACCTGAGGA GCAAGGCCTG TGACATTCTG GCCATTGATA AGTCCCTGAC ACCAGTCACC 
CTGGTCCTGG CAGAGGATGG CACCATAGTG GATGATGACG ATTACTTTCT GTGTCTACCT 
TCCAATACTA AGTTTGTGGC GTTGGCCAAT AATGAGAAAT GGGCCTACAA CAATTCAGAT 
GGAGGTACAG CTTGGATTTC CCAAGAGTCC TTTGATGTAG ATGAAACAGA CAGGGGAGCA 
GGGTTGAAGT GGAAGAATGT GGCCAGGCAG CTGAAAGAAG ATCTGTCCAG CATCATCCTC 
CTCTCAGAGG AAGACCTCCA GATGCTTGTT GACGCTCCCT GCGCAGACCT GGCTCAGGAA 
CTACTCCAGA GTTGTGCCAC TGTCCAGCAG CTGCAGCACA CACTCCAACA AGTGCTTGAC 
CAAAGAGAGG AAGTGCGTCA GTCCAAGCAG CTCCTGCAGC TGTACCTCGA GGCTTTGGAG 
AAAGAGGGCA GCCTCTTGTC AAAGCAGGAA GAGTCCAAAG CCGCCTTGGG TGAGGAGGCA 
GATGCAGTAG ACACGGGCAT CAGTAGAGAG GCCTCCTCGG ACGTCACGCT GGCGAGCCAC 
ATCCTTACTG CACTGAGGGA GAAGCCGGCT CCAGAGCTGA GCTTATCTAG TCAGGATTTG 
GAGTTGGTTA CCAGGGAAGA CCCCAAAGCA CTGGCTGTTG CTTTGAACTG GGACATAAGG 
AAGACGGAGA CTGTTCAAGA GGCCTGTGAG CGGGAGCTCG CCCTGCGCCT GCAGCAGATG 
CAGAGCTTGC ATTCCCTCCG GAGCATCTCG GCAAGGAAGG CCTCACCACC TGGAGAACGG 
CAAAATCCTA AGCGAGCCAA ACAGAAGCCC ACATAG

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID OMb58460
Clone ID Related Accession (Same CDS sequence) XM_028844810.1
Accession Version XM_028844810.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 804bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-04-25
Organism Macaca mulatta(Rhesus monkey)
Product DNA fragmentation factor subunit alpha isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041754.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
ATGGAAGTGA CCGGGGACGC CGGGGTACCA GAATCTGGCG AGATCCGGAC TCTAAAGCCG 
TGTCTGCTGC GCCGCAACCA CAGCCGCGAA CAGCACGGCG TGGCCGCCTC CTGCCTCGAA 
GACCTGAGGA GCAAGGCCTG TGACATTCTG GCCATTGATA AGTCCCTGAC ACCAGTCACC 
CTGGTCCTGG CAGAGGATGG CACCATAGTG GATGATGACG ATTACTTTCT GTGTCTACCT 
TCCAATACTA AGTTTGTGGC GTTGGCCAAT AATGAGAAAT GGGCCTACAA CAATTCAGAT 
GGAGGTACAG CTTGGATTTC CCAAGAGTCC TTTGATGTAG ATGAAACAGA CAGGGGAGCA 
GGGTTGAAGT GGAAGAATGT GGCCAGGCAG CTGAAAGAAG ATCTGTCCAG CATCATCCTC 
CTCTCAGAGG AAGACCTCCA GATGCTTGTT GACGCTCCCT GCGCAGACCT GGCTCAGGAA 
CTACTCCAGA GTTGTGCCAC TGTCCAGCAG CTGCAGCACA CACTCCAACA AGTGCTTGAC 
CAAAGAGAGG AAGTGCGTCA GTCCAAGCAG CTCCTGCAGC TGTACCTCGA GGCTTTGGAG 
AAAGAGGGCA GCCTCTTGTC AAAGCAGGAA GAGTCCAAAG CTGCCCTGGG TGAGGAGGCA 
GATGCAGTAG ACACGGGCAT CAGCAGAGAG GCCTCCTCGG ACGTCACGCT GGCGAGCCAC 
ATCCTTACTG CACTGAGAGA GAAGCCGGCT CCAGAGCTGA GCTTATCTAG TCAGGATTTG 
GAGAGTGAGC GGCCCCAAAT GTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_028700643.1
CDS347..1150
Translation

Target ORF information:

RefSeq Version XM_028844810.1
Organism Macaca mulatta(Rhesus monkey)
Definition Macaca mulatta DNA fragmentation factor subunit alpha (DFFA), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_028844810.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
ATGGAAGTGA CCGGGGACGC CGGGGTACCA GAATCTGGCG AGATCCGGAC TCTAAAGCCG 
TGTCTGCTGC GCCGCAACCA CAGCCGCGAA CAGCACGGCG TGGCCGCCTC CTGCCTCGAA 
GACCTGAGGA GCAAGGCCTG TGACATTCTG GCCATTGATA AGTCCCTGAC ACCAGTCACC 
CTGGTCCTGG CAGAGGATGG CACCATAGTG GATGATGACG ATTACTTTCT GTGTCTACCT 
TCCAATACTA AGTTTGTGGC GTTGGCCAAT AATGAGAAAT GGGCCTACAA CAATTCAGAT 
GGAGGTACAG CTTGGATTTC CCAAGAGTCC TTTGATGTAG ATGAAACAGA CAGGGGAGCA 
GGGTTGAAGT GGAAGAATGT GGCCAGGCAG CTGAAAGAAG ATCTGTCCAG CATCATCCTC 
CTCTCAGAGG AAGACCTCCA GATGCTTGTT GACGCTCCCT GCGCAGACCT GGCTCAGGAA 
CTACTCCAGA GTTGTGCCAC TGTCCAGCAG CTGCAGCACA CACTCCAACA AGTGCTTGAC 
CAAAGAGAGG AAGTGCGTCA GTCCAAGCAG CTCCTGCAGC TGTACCTCGA GGCTTTGGAG 
AAAGAGGGCA GCCTCTTGTC AAAGCAGGAA GAGTCCAAAG CTGCCCTGGG TGAGGAGGCA 
GATGCAGTAG ACACGGGCAT CAGCAGAGAG GCCTCCTCGG ACGTCACGCT GGCGAGCCAC 
ATCCTTACTG CACTGAGAGA GAAGCCGGCT CCAGAGCTGA GCTTATCTAG TCAGGATTTG 
GAGAGTGAGC GGCCCCAAAT GTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Biology direct9(1)20(2014 Oct)
Zimin AV,Cornish AS,Maudhoo MD,Gibbs RM,Zhang X,Pandey S,Meehan DT,Wipfler K,Bosinger SE,Johnson ZP,Tharp GK,Mar?ais G,Roberts M,Ferguson B,Fox HS,Treangen T,Salzberg SL,Yorke JA,Norgren RB Jr