The following COL9A2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL9A2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OPc59301 |
Clone ID Related Accession (Same CDS sequence) |
XM_016959840.1
|
Accession Version |
XM_016959840.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2070bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-01 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
collagen alpha-2(IX) chain isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006468.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Pan troglodytes Annotation Release 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041
| ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCGC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCAGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGGTT CTGGGTGATC CTGGGCGCCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC GGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGTGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA TGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACGGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CTGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAGA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GATTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GTGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGAAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC TGTGGGGCTG CCGGGCTTCT GTGAACCTGC AGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016815329.1 |
CDS | 342..2411 |
Translation | |
Target ORF information:
RefSeq Version | XM_016959840.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes collagen type IX alpha 2 (COL9A2), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016959840.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041
| ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCGC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCAGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGGTT CTGGGTGATC CTGGGCGCCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC GGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGTGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA TGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACGGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CTGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAGA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GATTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GTGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGAAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC TGTGGGGCTG CCGGGCTTCT GTGAACCTGC AGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc59302 |
Clone ID Related Accession (Same CDS sequence) |
XM_016959844.1
|
Accession Version |
XM_016959844.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1788bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-01 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
collagen alpha-2(IX) chain isoform X3 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006468.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Pan troglodytes Annotation Release 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGGGGATCC CTGGAGTCAA GGGCCAGCCC GGGCTTCCTG GTCCTCCTGG CCTTCCGGGC CCTGGTTTTG CTGGACCTCC TGGGCCGCCT GGACCTGTTG GCCTCCCTGG TGAGATTGGA ATCCGAGGCC CCAAGGGGGA CCCTGGACCA GATGGACCAT CAGGGCCCCC AGGACCCCCT GGGAAACCTG GTCGCCCGGG AACCATCCAG GGTCTGGAAG GCAGTGCGGA TTTCCTGTGT CCAACCAACT GTCCACCCGG AATGAAAGGT CCCCCAGGGC TGCAGGGAGT GAAGGGGCAT GCGGGCAAAC GCGGGGTTCT GGGTGATCCT GGGCGCCAGG GGAAGCCGGG TCCCAAGGGA GATGTGGGTG CCTCTGGAGA GCAAGGCATC CCTGGACCAC CGGGTCCCCA GGGCATCAGG GGCTACCCGG GCATGGCAGG GCCCAAGGGA GAGACGGGCC CTCATGGATA TAAAGGCATG GTGGGCGCTA TCGGTGCCAC TGGGCCACCG GGTGAGGAAG GTCCTAGGGG ACCGCCAGGC CGAGCTGGGG AGAAGGGTGA CGTGGGCAGC CCAGGTATTC GTGGACCCCA GGGGATCACA GGCCCGAAAG GAGCAACGGG CCCCCCAGGC ATCAACGGCA AGGATGGGAC CCCAGGCATG CCTGGCATGA AGGGCAGTGC AGGACAGGCG GGACGGCCCG GAAGTCCAGG CCACCAGGGC CTAGCGGGTG TGCCAGGCCA GCCTGGGACA AAAGGAGGCC CTGGAGACCA GGGTGAGCCG GGCCCGCAGG GCCTTCCTGG ATTCTCTGGT CCCCCTGGGA AAGAGGGAGA GCCAGGGCCT CGAGGAGAAA TTGGTCCCCA GGGCATCATG GGACAGAAGG GTGACCAAGG CGAGAGGGGT CCAGTGGGGC AACCAGGCCC TCAGGGAAGG CAGGGCCCTA AGGGGGAGCA GGGCCCCCCT GGAATTCCAG GGCCCCAAGG CTTGCCAGGC GTCAAAGGAG ACAAGGGCTC CCCAGGGAAG ACCGGGCCCC GCGGCAGAGT GGGTGACCCA GGGGTGGCCG GCCTCCCCGG AGAGAAAGGC GAGAAGGGCG AGTCCGGCGA GCCGGGGCCC AAGGGACAGC AAGGAGTACG TGGAGAACCC GGCTACCCTG GCCCCAGCGG GGATGCGGGC GCCCCAGGGA TTCAGGGCTA CCCTGGTCCC CCCGGCCCTC GAGGACTGGC CGGGAACCGA GGCGTGCCAG GACAGCCCGG GAGACAGGGT GTGGAGGGCC GGGATGCCAC TGACCAGCAC ATCGTGGATG TGGCGCTGAA GATGCTGCAA GAGCAACTGG CAGAGGTCGC CGTGAGTGCC AAGCGGGAAG CCCTGGGTGC GGTGGGCATG ATGGGTCCTC CAGGACCTCC TGGGCCCCCT GGGTACCCAG GAAAGCAGGG CCCCCATGGG CACCCTGGCC CTCGGGGCGT TCCTGGCATC GTGGGAGCCG TGGGTCAGAT CGGCAACACG GGGCCCAAGG GAAAACGTGG AGAGAAGGGT GATCCAGGAG AAGTGGGACG GGGGCACCCC GGGATGCCTG GGCCCCCAGG GATCCCAGGA CTCCCTGGCC GGCCTGGCCA GGCAATCAAC GGCAAGGATG GAGATCGAGG GTCCCCAGGG GCTCCAGGAG AGGCAGGTCG ACCTGGCCTG CCAGGCCCTG TGGGGCTGCC GGGCTTCTGT GAACCTGCAG CCTGCCTTGG AGCTTCGGCC TATGCCTCTG CCCGCCTTAC AGAGCCTGGA TCCATCAAGG GGCCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016815333.1 |
CDS | 436..2223 |
Translation | |
Target ORF information:
RefSeq Version | XM_016959844.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes collagen type IX alpha 2 (COL9A2), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016959844.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGGGGATCC CTGGAGTCAA GGGCCAGCCC GGGCTTCCTG GTCCTCCTGG CCTTCCGGGC CCTGGTTTTG CTGGACCTCC TGGGCCGCCT GGACCTGTTG GCCTCCCTGG TGAGATTGGA ATCCGAGGCC CCAAGGGGGA CCCTGGACCA GATGGACCAT CAGGGCCCCC AGGACCCCCT GGGAAACCTG GTCGCCCGGG AACCATCCAG GGTCTGGAAG GCAGTGCGGA TTTCCTGTGT CCAACCAACT GTCCACCCGG AATGAAAGGT CCCCCAGGGC TGCAGGGAGT GAAGGGGCAT GCGGGCAAAC GCGGGGTTCT GGGTGATCCT GGGCGCCAGG GGAAGCCGGG TCCCAAGGGA GATGTGGGTG CCTCTGGAGA GCAAGGCATC CCTGGACCAC CGGGTCCCCA GGGCATCAGG GGCTACCCGG GCATGGCAGG GCCCAAGGGA GAGACGGGCC CTCATGGATA TAAAGGCATG GTGGGCGCTA TCGGTGCCAC TGGGCCACCG GGTGAGGAAG GTCCTAGGGG ACCGCCAGGC CGAGCTGGGG AGAAGGGTGA CGTGGGCAGC CCAGGTATTC GTGGACCCCA GGGGATCACA GGCCCGAAAG GAGCAACGGG CCCCCCAGGC ATCAACGGCA AGGATGGGAC CCCAGGCATG CCTGGCATGA AGGGCAGTGC AGGACAGGCG GGACGGCCCG GAAGTCCAGG CCACCAGGGC CTAGCGGGTG TGCCAGGCCA GCCTGGGACA AAAGGAGGCC CTGGAGACCA GGGTGAGCCG GGCCCGCAGG GCCTTCCTGG ATTCTCTGGT CCCCCTGGGA AAGAGGGAGA GCCAGGGCCT CGAGGAGAAA TTGGTCCCCA GGGCATCATG GGACAGAAGG GTGACCAAGG CGAGAGGGGT CCAGTGGGGC AACCAGGCCC TCAGGGAAGG CAGGGCCCTA AGGGGGAGCA GGGCCCCCCT GGAATTCCAG GGCCCCAAGG CTTGCCAGGC GTCAAAGGAG ACAAGGGCTC CCCAGGGAAG ACCGGGCCCC GCGGCAGAGT GGGTGACCCA GGGGTGGCCG GCCTCCCCGG AGAGAAAGGC GAGAAGGGCG AGTCCGGCGA GCCGGGGCCC AAGGGACAGC AAGGAGTACG TGGAGAACCC GGCTACCCTG GCCCCAGCGG GGATGCGGGC GCCCCAGGGA TTCAGGGCTA CCCTGGTCCC CCCGGCCCTC GAGGACTGGC CGGGAACCGA GGCGTGCCAG GACAGCCCGG GAGACAGGGT GTGGAGGGCC GGGATGCCAC TGACCAGCAC ATCGTGGATG TGGCGCTGAA GATGCTGCAA GAGCAACTGG CAGAGGTCGC CGTGAGTGCC AAGCGGGAAG CCCTGGGTGC GGTGGGCATG ATGGGTCCTC CAGGACCTCC TGGGCCCCCT GGGTACCCAG GAAAGCAGGG CCCCCATGGG CACCCTGGCC CTCGGGGCGT TCCTGGCATC GTGGGAGCCG TGGGTCAGAT CGGCAACACG GGGCCCAAGG GAAAACGTGG AGAGAAGGGT GATCCAGGAG AAGTGGGACG GGGGCACCCC GGGATGCCTG GGCCCCCAGG GATCCCAGGA CTCCCTGGCC GGCCTGGCCA GGCAATCAAC GGCAAGGATG GAGATCGAGG GTCCCCAGGG GCTCCAGGAG AGGCAGGTCG ACCTGGCCTG CCAGGCCCTG TGGGGCTGCC GGGCTTCTGT GAACCTGCAG CCTGCCTTGG AGCTTCGGCC TATGCCTCTG CCCGCCTTAC AGAGCCTGGA TCCATCAAGG GGCCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc59303 |
Clone ID Related Accession (Same CDS sequence) |
XM_016959852.1
|
Accession Version |
XM_016959852.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1764bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-01 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
collagen alpha-2(IX) chain isoform X4 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006468.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Pan troglodytes Annotation Release 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGCCCAGGG TATCTGACCC TCTGAGGCAT CCTGACCATC AACTCTCTGC TCCCCAGGGG CCGCCTGGAC CTGTTGGCCT CCCTGGTGAG ATTGGAATCC GAGGCCCCAA GGGGGACCCT GGACCAGATG GACCATCAGG GCCCCCAGGA CCCCCTGGGA AACCTGGTCG CCCGGGAACC ATCCAGGGTC TGGAAGGCAG TGCGGATTTC CTGTGTCCAA CCAACTGTCC ACCCGGAATG AAAGGTCCCC CAGGGCTGCA GGGAGTGAAG GGGCATGCGG GCAAACGCGG GGTTCTGGGT GATCCTGGGC GCCAGGGGAA GCCGGGTCCC AAGGGAGATG TGGGTGCCTC TGGAGAGCAA GGCATCCCTG GACCACCGGG TCCCCAGGGC ATCAGGGGCT ACCCGGGCAT GGCAGGGCCC AAGGGAGAGA CGGGCCCTCA TGGATATAAA GGCATGGTGG GCGCTATCGG TGCCACTGGG CCACCGGGTG AGGAAGGTCC TAGGGGACCG CCAGGCCGAG CTGGGGAGAA GGGTGACGTG GGCAGCCCAG GTATTCGTGG ACCCCAGGGG ATCACAGGCC CGAAAGGAGC AACGGGCCCC CCAGGCATCA ACGGCAAGGA TGGGACCCCA GGCATGCCTG GCATGAAGGG CAGTGCAGGA CAGGCGGGAC GGCCCGGAAG TCCAGGCCAC CAGGGCCTAG CGGGTGTGCC AGGCCAGCCT GGGACAAAAG GAGGCCCTGG AGACCAGGGT GAGCCGGGCC CGCAGGGCCT TCCTGGATTC TCTGGTCCCC CTGGGAAAGA GGGAGAGCCA GGGCCTCGAG GAGAAATTGG TCCCCAGGGC ATCATGGGAC AGAAGGGTGA CCAAGGCGAG AGGGGTCCAG TGGGGCAACC AGGCCCTCAG GGAAGGCAGG GCCCTAAGGG GGAGCAGGGC CCCCCTGGAA TTCCAGGGCC CCAAGGCTTG CCAGGCGTCA AAGGAGACAA GGGCTCCCCA GGGAAGACCG GGCCCCGCGG CAGAGTGGGT GACCCAGGGG TGGCCGGCCT CCCCGGAGAG AAAGGCGAGA AGGGCGAGTC CGGCGAGCCG GGGCCCAAGG GACAGCAAGG AGTACGTGGA GAACCCGGCT ACCCTGGCCC CAGCGGGGAT GCGGGCGCCC CAGGGATTCA GGGCTACCCT GGTCCCCCCG GCCCTCGAGG ACTGGCCGGG AACCGAGGCG TGCCAGGACA GCCCGGGAGA CAGGGTGTGG AGGGCCGGGA TGCCACTGAC CAGCACATCG TGGATGTGGC GCTGAAGATG CTGCAAGAGC AACTGGCAGA GGTCGCCGTG AGTGCCAAGC GGGAAGCCCT GGGTGCGGTG GGCATGATGG GTCCTCCAGG ACCTCCTGGG CCCCCTGGGT ACCCAGGAAA GCAGGGCCCC CATGGGCACC CTGGCCCTCG GGGCGTTCCT GGCATCGTGG GAGCCGTGGG TCAGATCGGC AACACGGGGC CCAAGGGAAA ACGTGGAGAG AAGGGTGATC CAGGAGAAGT GGGACGGGGG CACCCCGGGA TGCCTGGGCC CCCAGGGATC CCAGGACTCC CTGGCCGGCC TGGCCAGGCA ATCAACGGCA AGGATGGAGA TCGAGGGTCC CCAGGGGCTC CAGGAGAGGC AGGTCGACCT GGCCTGCCAG GCCCTGTGGG GCTGCCGGGC TTCTGTGAAC CTGCAGCCTG CCTTGGAGCT TCGGCCTATG CCTCTGCCCG CCTTACAGAG CCTGGATCCA TCAAGGGGCC TTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016815341.1 |
CDS | 1389..3152 |
Translation | |
Target ORF information:
RefSeq Version | XM_016959852.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes collagen type IX alpha 2 (COL9A2), transcript variant X4, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016959852.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGCCCAGGG TATCTGACCC TCTGAGGCAT CCTGACCATC AACTCTCTGC TCCCCAGGGG CCGCCTGGAC CTGTTGGCCT CCCTGGTGAG ATTGGAATCC GAGGCCCCAA GGGGGACCCT GGACCAGATG GACCATCAGG GCCCCCAGGA CCCCCTGGGA AACCTGGTCG CCCGGGAACC ATCCAGGGTC TGGAAGGCAG TGCGGATTTC CTGTGTCCAA CCAACTGTCC ACCCGGAATG AAAGGTCCCC CAGGGCTGCA GGGAGTGAAG GGGCATGCGG GCAAACGCGG GGTTCTGGGT GATCCTGGGC GCCAGGGGAA GCCGGGTCCC AAGGGAGATG TGGGTGCCTC TGGAGAGCAA GGCATCCCTG GACCACCGGG TCCCCAGGGC ATCAGGGGCT ACCCGGGCAT GGCAGGGCCC AAGGGAGAGA CGGGCCCTCA TGGATATAAA GGCATGGTGG GCGCTATCGG TGCCACTGGG CCACCGGGTG AGGAAGGTCC TAGGGGACCG CCAGGCCGAG CTGGGGAGAA GGGTGACGTG GGCAGCCCAG GTATTCGTGG ACCCCAGGGG ATCACAGGCC CGAAAGGAGC AACGGGCCCC CCAGGCATCA ACGGCAAGGA TGGGACCCCA GGCATGCCTG GCATGAAGGG CAGTGCAGGA CAGGCGGGAC GGCCCGGAAG TCCAGGCCAC CAGGGCCTAG CGGGTGTGCC AGGCCAGCCT GGGACAAAAG GAGGCCCTGG AGACCAGGGT GAGCCGGGCC CGCAGGGCCT TCCTGGATTC TCTGGTCCCC CTGGGAAAGA GGGAGAGCCA GGGCCTCGAG GAGAAATTGG TCCCCAGGGC ATCATGGGAC AGAAGGGTGA CCAAGGCGAG AGGGGTCCAG TGGGGCAACC AGGCCCTCAG GGAAGGCAGG GCCCTAAGGG GGAGCAGGGC CCCCCTGGAA TTCCAGGGCC CCAAGGCTTG CCAGGCGTCA AAGGAGACAA GGGCTCCCCA GGGAAGACCG GGCCCCGCGG CAGAGTGGGT GACCCAGGGG TGGCCGGCCT CCCCGGAGAG AAAGGCGAGA AGGGCGAGTC CGGCGAGCCG GGGCCCAAGG GACAGCAAGG AGTACGTGGA GAACCCGGCT ACCCTGGCCC CAGCGGGGAT GCGGGCGCCC CAGGGATTCA GGGCTACCCT GGTCCCCCCG GCCCTCGAGG ACTGGCCGGG AACCGAGGCG TGCCAGGACA GCCCGGGAGA CAGGGTGTGG AGGGCCGGGA TGCCACTGAC CAGCACATCG TGGATGTGGC GCTGAAGATG CTGCAAGAGC AACTGGCAGA GGTCGCCGTG AGTGCCAAGC GGGAAGCCCT GGGTGCGGTG GGCATGATGG GTCCTCCAGG ACCTCCTGGG CCCCCTGGGT ACCCAGGAAA GCAGGGCCCC CATGGGCACC CTGGCCCTCG GGGCGTTCCT GGCATCGTGG GAGCCGTGGG TCAGATCGGC AACACGGGGC CCAAGGGAAA ACGTGGAGAG AAGGGTGATC CAGGAGAAGT GGGACGGGGG CACCCCGGGA TGCCTGGGCC CCCAGGGATC CCAGGACTCC CTGGCCGGCC TGGCCAGGCA ATCAACGGCA AGGATGGAGA TCGAGGGTCC CCAGGGGCTC CAGGAGAGGC AGGTCGACCT GGCCTGCCAG GCCCTGTGGG GCTGCCGGGC TTCTGTGAAC CTGCAGCCTG CCTTGGAGCT TCGGCCTATG CCTCTGCCCG CCTTACAGAG CCTGGATCCA TCAAGGGGCC TTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc92605 |
Clone ID Related Accession (Same CDS sequence) |
XM_016959838.2
|
Accession Version |
XM_016959838.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2286bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
collagen alpha-2(IX) chain isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036879.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 20, 2018 this sequence version replaced XM_016959838.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281
| ATGGAGGTGG CTGAGCCGGA GAGTCAAACG GGACCCGTCC CGAGACGCGC GGCCCGGCCC GGGACAGGCA GCGTGGGGCA GGAGCTGGCG CCCGGTCCTG GCAGCCCGGG GAGCCCAGGT GGCGGGGCAT ACAATGGTGC TCATTCACCC GCTGCGCAGC CTCCGCCCCC GCCGCCTCCC AGGGGGCGCC GGCTCCAACC AGACGCCGCT GTCGCCCCGA GGCGGCCTCT CGGCCCTGCC CGTCTACCCA CGTCTCCCTT CCGAGGGCCG CCGGGGGCTG CGGGCGCGCG GAGAGGTCCA CCGGGAGAGC GGGGCCCCCC GGGTCCCCCG GGACCGCCGG GAGTGCCTGG ATCCGACGGC ATCGACGGTG ACAATGGGCC CCCTGGAAAA GCTGGCCCTC CGGGACCCAA GGGCGAGCCT GGCAAAGCTG GGCCAGATGG GCCAGACGGG AAGCCCGGGA TTGATGGTTT AACTGGAGCC AAGGGGGAGC CTGGCCCCAT GGGGATCCCT GGAGTCAAGG GCCAGCCCGG GCTTCCTGGT CCTCCTGGCC TTCCGGGCCC TGGTTTTGCT GGACCTCCTG GGCCGCCTGG ACCTGTTGGC CTCCCTGGTG AGATTGGAAT CCGAGGCCCC AAGGGGGACC CTGGACCAGA TGGACCATCA GGGCCCCCAG GACCCCCTGG GAAACCTGGT CGCCCGGGAA CCATCCAGGG TCTGGAAGGC AGTGCGGATT TCCTGTGTCC AACCAACTGT CCACCCGGAA TGAAAGGTCC CCCAGGGCTG CAGGGAGTGA AGGGGCATGC GGGCAAACGC GGGGTTCTGG GTGATCCTGG GCGCCAGGGG AAGCCGGGTC CCAAGGGAGA TGTGGGTGCC TCTGGAGAGC AAGGCATCCC TGGACCACCG GGTCCCCAGG GCATCAGGGG CTACCCGGGC ATGGCAGGGC CCAAGGGAGA GACGGGCCCT CATGGATATA AAGGCATGGT GGGCGCTATC GGTGCCACTG GGCCACCGGG TGAGGAAGGT CCTAGGGGAC CGCCAGGCCG AGCTGGGGAG AAGGGTGACG TGGGCAGCCC AGGTATTCGT GGACCCCAGG GGATCACAGG CCCGAAAGGA GCAACGGGCC CCCCAGGCAT CAACGGCAAG GATGGGACCC CAGGCATGCC TGGCATGAAG GGCAGTGCAG GACAGGCGGG ACGGCCCGGA AGTCCAGGCC ACCAGGGCCT AGCGGGTGTG CCAGGCCAGC CTGGGACAAA AGGAGGCCCT GGAGACCAGG GTGAGCCGGG CCCGCAGGGC CTTCCTGGAT TCTCTGGTCC CCCTGGGAAA GAGGGAGAGC CAGGGCCTCG AGGAGAAATT GGTCCCCAGG GCATCATGGG ACAGAAGGGT GACCAAGGCG AGAGGGGTCC AGTGGGGCAA CCAGGCCCTC AGGGAAGGCA GGGCCCTAAG GGGGAGCAGG GCCCCCCTGG AATTCCAGGG CCCCAAGGCT TGCCAGGCGT CAAAGGAGAC AAGGGCTCCC CAGGGAAGAC CGGGCCCCGC GGCAGAGTGG GTGACCCAGG GGTGGCCGGC CTCCCCGGAG AGAAAGGCGA GAAGGGCGAG TCCGGCGAGC CGGGGCCCAA GGGACAGCAA GGAGTACGTG GAGAACCCGG CTACCCTGGC CCCAGCGGGG ATGCGGGCGC CCCAGGGATT CAGGGCTACC CTGGTCCCCC CGGCCCTCGA GGACTGGCCG GGAACCGAGG CGTGCCAGGA CAGCCCGGGA GACAGGGTGT GGAGGGCCGG GATGCCACTG ACCAGCACAT CGTGGATGTG GCGCTGAAGA TGCTGCAAGA GCAACTGGCA GAGGTCGCCG TGAGTGCCAA GCGGGAAGCC CTGGGTGCGG TGGGCATGAT GGGTCCTCCA GGACCTCCTG GGCCCCCTGG GTACCCAGGC AAGCAGGGCC CCCATGGGCA CCCTGGCCCT CGGGGCGTTC CTGGCATCGT GGGAGCCGTG GGTCAGATCG GCAACACGGG GCCCAAGGGA AAACGTGGAG AGAAGGGTGA TCCAGGAGAA GTGGGACGGG GGCACCCCGG GATGCCTGGG CCCCCAGGGA TCCCAGGACT CCCTGGCCGG CCTGGCCAGG CAATCAACGG CAAGGATGGA GATCGAGGGT CCCCAGGGGC TCCAGGAGAG GCAGGTCGAC CTGGCCTGCC AGGCCCTGTG GGGCTGCCGG GCTTCTGTGA ACCTGCAGCC TGCCTTGGAG CTTCGGCCTA TGCCTCTGCC CGCCTTACAG AGCCTGGATC CATCAAGGGG CCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016815327.1 |
CDS | 138..2423 |
Translation | |
Target ORF information:
RefSeq Version | XM_016959838.2 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes collagen type IX alpha 2 chain (COL9A2), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016959838.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281
| ATGGAGGTGG CTGAGCCGGA GAGTCAAACG GGACCCGTCC CGAGACGCGC GGCCCGGCCC GGGACAGGCA GCGTGGGGCA GGAGCTGGCG CCCGGTCCTG GCAGCCCGGG GAGCCCAGGT GGCGGGGCAT ACAATGGTGC TCATTCACCC GCTGCGCAGC CTCCGCCCCC GCCGCCTCCC AGGGGGCGCC GGCTCCAACC AGACGCCGCT GTCGCCCCGA GGCGGCCTCT CGGCCCTGCC CGTCTACCCA CGTCTCCCTT CCGAGGGCCG CCGGGGGCTG CGGGCGCGCG GAGAGGTCCA CCGGGAGAGC GGGGCCCCCC GGGTCCCCCG GGACCGCCGG GAGTGCCTGG ATCCGACGGC ATCGACGGTG ACAATGGGCC CCCTGGAAAA GCTGGCCCTC CGGGACCCAA GGGCGAGCCT GGCAAAGCTG GGCCAGATGG GCCAGACGGG AAGCCCGGGA TTGATGGTTT AACTGGAGCC AAGGGGGAGC CTGGCCCCAT GGGGATCCCT GGAGTCAAGG GCCAGCCCGG GCTTCCTGGT CCTCCTGGCC TTCCGGGCCC TGGTTTTGCT GGACCTCCTG GGCCGCCTGG ACCTGTTGGC CTCCCTGGTG AGATTGGAAT CCGAGGCCCC AAGGGGGACC CTGGACCAGA TGGACCATCA GGGCCCCCAG GACCCCCTGG GAAACCTGGT CGCCCGGGAA CCATCCAGGG TCTGGAAGGC AGTGCGGATT TCCTGTGTCC AACCAACTGT CCACCCGGAA TGAAAGGTCC CCCAGGGCTG CAGGGAGTGA AGGGGCATGC GGGCAAACGC GGGGTTCTGG GTGATCCTGG GCGCCAGGGG AAGCCGGGTC CCAAGGGAGA TGTGGGTGCC TCTGGAGAGC AAGGCATCCC TGGACCACCG GGTCCCCAGG GCATCAGGGG CTACCCGGGC ATGGCAGGGC CCAAGGGAGA GACGGGCCCT CATGGATATA AAGGCATGGT GGGCGCTATC GGTGCCACTG GGCCACCGGG TGAGGAAGGT CCTAGGGGAC CGCCAGGCCG AGCTGGGGAG AAGGGTGACG TGGGCAGCCC AGGTATTCGT GGACCCCAGG GGATCACAGG CCCGAAAGGA GCAACGGGCC CCCCAGGCAT CAACGGCAAG GATGGGACCC CAGGCATGCC TGGCATGAAG GGCAGTGCAG GACAGGCGGG ACGGCCCGGA AGTCCAGGCC ACCAGGGCCT AGCGGGTGTG CCAGGCCAGC CTGGGACAAA AGGAGGCCCT GGAGACCAGG GTGAGCCGGG CCCGCAGGGC CTTCCTGGAT TCTCTGGTCC CCCTGGGAAA GAGGGAGAGC CAGGGCCTCG AGGAGAAATT GGTCCCCAGG GCATCATGGG ACAGAAGGGT GACCAAGGCG AGAGGGGTCC AGTGGGGCAA CCAGGCCCTC AGGGAAGGCA GGGCCCTAAG GGGGAGCAGG GCCCCCCTGG AATTCCAGGG CCCCAAGGCT TGCCAGGCGT CAAAGGAGAC AAGGGCTCCC CAGGGAAGAC CGGGCCCCGC GGCAGAGTGG GTGACCCAGG GGTGGCCGGC CTCCCCGGAG AGAAAGGCGA GAAGGGCGAG TCCGGCGAGC CGGGGCCCAA GGGACAGCAA GGAGTACGTG GAGAACCCGG CTACCCTGGC CCCAGCGGGG ATGCGGGCGC CCCAGGGATT CAGGGCTACC CTGGTCCCCC CGGCCCTCGA GGACTGGCCG GGAACCGAGG CGTGCCAGGA CAGCCCGGGA GACAGGGTGT GGAGGGCCGG GATGCCACTG ACCAGCACAT CGTGGATGTG GCGCTGAAGA TGCTGCAAGA GCAACTGGCA GAGGTCGCCG TGAGTGCCAA GCGGGAAGCC CTGGGTGCGG TGGGCATGAT GGGTCCTCCA GGACCTCCTG GGCCCCCTGG GTACCCAGGC AAGCAGGGCC CCCATGGGCA CCCTGGCCCT CGGGGCGTTC CTGGCATCGT GGGAGCCGTG GGTCAGATCG GCAACACGGG GCCCAAGGGA AAACGTGGAG AGAAGGGTGA TCCAGGAGAA GTGGGACGGG GGCACCCCGG GATGCCTGGG CCCCCAGGGA TCCCAGGACT CCCTGGCCGG CCTGGCCAGG CAATCAACGG CAAGGATGGA GATCGAGGGT CCCCAGGGGC TCCAGGAGAG GCAGGTCGAC CTGGCCTGCC AGGCCCTGTG GGGCTGCCGG GCTTCTGTGA ACCTGCAGCC TGCCTTGGAG CTTCGGCCTA TGCCTCTGCC CGCCTTACAG AGCCTGGATC CATCAAGGGG CCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc92606 |
Clone ID Related Accession (Same CDS sequence) |
XM_016959840.2
|
Accession Version |
XM_016959840.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2070bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
collagen alpha-2(IX) chain isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036879.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 20, 2018 this sequence version replaced XM_016959840.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041
| ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCGC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCAGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGGTT CTGGGTGATC CTGGGCGCCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC GGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGTGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA TGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACGGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CTGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAGA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GATTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GTGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC TGTGGGGCTG CCGGGCTTCT GTGAACCTGC AGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016815329.1 |
CDS | 342..2411 |
Translation | |
Target ORF information:
RefSeq Version | XM_016959840.2 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes collagen type IX alpha 2 chain (COL9A2), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016959840.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041
| ATGGCCGCCG CTACGGCCTC CCCCCGCAGC CTCCTTGTTC TCCTCCAGGT GGTAGTGCTC GCTCTGGCGC AGATTAGAGG TCCACCGGGA GAGCGGGGCC CCCCGGGTCC CCCGGGACCG CCGGGAGTGC CTGGATCCGA CGGCATCGAC GGTGACAATG GGCCCCCTGG AAAAGCTGGC CCTCCGGGAC CCAAGGGCGA GCCTGGCAAA GCTGGGCCAG ATGGGCCAGA CGGGAAGCCC GGGATTGATG GTTTAACTGG AGCCAAGGGG GAGCCTGGCC CCATGGGGAT CCCTGGAGTC AAGGGCCAGC CCGGGCTTCC TGGTCCTCCT GGCCTTCCGG GCCCTGGTTT TGCTGGACCT CCTGGGCCGC CTGGACCTGT TGGCCTCCCT GGTGAGATTG GAATCCGAGG CCCCAAGGGG GACCCTGGAC CAGATGGACC ATCAGGGCCC CCAGGACCCC CTGGGAAACC TGGTCGCCCG GGAACCATCC AGGGTCTGGA AGGCAGTGCG GATTTCCTGT GTCCAACCAA CTGTCCACCC GGAATGAAAG GTCCCCCAGG GCTGCAGGGA GTGAAGGGGC ATGCGGGCAA ACGCGGGGTT CTGGGTGATC CTGGGCGCCA GGGGAAGCCG GGTCCCAAGG GAGATGTGGG TGCCTCTGGA GAGCAAGGCA TCCCTGGACC ACCGGGTCCC CAGGGCATCA GGGGCTACCC GGGCATGGCA GGGCCCAAGG GAGAGACGGG CCCTCATGGA TATAAAGGCA TGGTGGGCGC TATCGGTGCC ACTGGGCCAC CGGGTGAGGA AGGTCCTAGG GGACCGCCAG GCCGAGCTGG GGAGAAGGGT GACGTGGGCA GCCCAGGTAT TCGTGGACCC CAGGGGATCA CAGGCCCGAA AGGAGCAACG GGCCCCCCAG GCATCAACGG CAAGGATGGG ACCCCAGGCA TGCCTGGCAT GAAGGGCAGT GCAGGACAGG CGGGACGGCC CGGAAGTCCA GGCCACCAGG GCCTAGCGGG TGTGCCAGGC CAGCCTGGGA CAAAAGGAGG CCCTGGAGAC CAGGGTGAGC CGGGCCCGCA GGGCCTTCCT GGATTCTCTG GTCCCCCTGG GAAAGAGGGA GAGCCAGGGC CTCGAGGAGA AATTGGTCCC CAGGGCATCA TGGGACAGAA GGGTGACCAA GGCGAGAGGG GTCCAGTGGG GCAACCAGGC CCTCAGGGAA GGCAGGGCCC TAAGGGGGAG CAGGGCCCCC CTGGAATTCC AGGGCCCCAA GGCTTGCCAG GCGTCAAAGG AGACAAGGGC TCCCCAGGGA AGACCGGGCC CCGCGGCAGA GTGGGTGACC CAGGGGTGGC CGGCCTCCCC GGAGAGAAAG GCGAGAAGGG CGAGTCCGGC GAGCCGGGGC CCAAGGGACA GCAAGGAGTA CGTGGAGAAC CCGGCTACCC TGGCCCCAGC GGGGATGCGG GCGCCCCAGG GATTCAGGGC TACCCTGGTC CCCCCGGCCC TCGAGGACTG GCCGGGAACC GAGGCGTGCC AGGACAGCCC GGGAGACAGG GTGTGGAGGG CCGGGATGCC ACTGACCAGC ACATCGTGGA TGTGGCGCTG AAGATGCTGC AAGAGCAACT GGCAGAGGTC GCCGTGAGTG CCAAGCGGGA AGCCCTGGGT GCGGTGGGCA TGATGGGTCC TCCAGGACCT CCTGGGCCCC CTGGGTACCC AGGCAAGCAG GGCCCCCATG GGCACCCTGG CCCTCGGGGC GTTCCTGGCA TCGTGGGAGC CGTGGGTCAG ATCGGCAACA CGGGGCCCAA GGGAAAACGT GGAGAGAAGG GTGATCCAGG AGAAGTGGGA CGGGGGCACC CCGGGATGCC TGGGCCCCCA GGGATCCCAG GACTCCCTGG CCGGCCTGGC CAGGCAATCA ACGGCAAGGA TGGAGATCGA GGGTCCCCAG GGGCTCCAGG AGAGGCAGGT CGACCTGGCC TGCCAGGCCC TGTGGGGCTG CCGGGCTTCT GTGAACCTGC AGCCTGCCTT GGAGCTTCGG CCTATGCCTC TGCCCGCCTT ACAGAGCCTG GATCCATCAA GGGGCCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc92607 |
Clone ID Related Accession (Same CDS sequence) |
XM_016959844.2
|
Accession Version |
XM_016959844.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1788bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
collagen alpha-2(IX) chain isoform X3 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036879.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 20, 2018 this sequence version replaced XM_016959844.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGGGGATCC CTGGAGTCAA GGGCCAGCCC GGGCTTCCTG GTCCTCCTGG CCTTCCGGGC CCTGGTTTTG CTGGACCTCC TGGGCCGCCT GGACCTGTTG GCCTCCCTGG TGAGATTGGA ATCCGAGGCC CCAAGGGGGA CCCTGGACCA GATGGACCAT CAGGGCCCCC AGGACCCCCT GGGAAACCTG GTCGCCCGGG AACCATCCAG GGTCTGGAAG GCAGTGCGGA TTTCCTGTGT CCAACCAACT GTCCACCCGG AATGAAAGGT CCCCCAGGGC TGCAGGGAGT GAAGGGGCAT GCGGGCAAAC GCGGGGTTCT GGGTGATCCT GGGCGCCAGG GGAAGCCGGG TCCCAAGGGA GATGTGGGTG CCTCTGGAGA GCAAGGCATC CCTGGACCAC CGGGTCCCCA GGGCATCAGG GGCTACCCGG GCATGGCAGG GCCCAAGGGA GAGACGGGCC CTCATGGATA TAAAGGCATG GTGGGCGCTA TCGGTGCCAC TGGGCCACCG GGTGAGGAAG GTCCTAGGGG ACCGCCAGGC CGAGCTGGGG AGAAGGGTGA CGTGGGCAGC CCAGGTATTC GTGGACCCCA GGGGATCACA GGCCCGAAAG GAGCAACGGG CCCCCCAGGC ATCAACGGCA AGGATGGGAC CCCAGGCATG CCTGGCATGA AGGGCAGTGC AGGACAGGCG GGACGGCCCG GAAGTCCAGG CCACCAGGGC CTAGCGGGTG TGCCAGGCCA GCCTGGGACA AAAGGAGGCC CTGGAGACCA GGGTGAGCCG GGCCCGCAGG GCCTTCCTGG ATTCTCTGGT CCCCCTGGGA AAGAGGGAGA GCCAGGGCCT CGAGGAGAAA TTGGTCCCCA GGGCATCATG GGACAGAAGG GTGACCAAGG CGAGAGGGGT CCAGTGGGGC AACCAGGCCC TCAGGGAAGG CAGGGCCCTA AGGGGGAGCA GGGCCCCCCT GGAATTCCAG GGCCCCAAGG CTTGCCAGGC GTCAAAGGAG ACAAGGGCTC CCCAGGGAAG ACCGGGCCCC GCGGCAGAGT GGGTGACCCA GGGGTGGCCG GCCTCCCCGG AGAGAAAGGC GAGAAGGGCG AGTCCGGCGA GCCGGGGCCC AAGGGACAGC AAGGAGTACG TGGAGAACCC GGCTACCCTG GCCCCAGCGG GGATGCGGGC GCCCCAGGGA TTCAGGGCTA CCCTGGTCCC CCCGGCCCTC GAGGACTGGC CGGGAACCGA GGCGTGCCAG GACAGCCCGG GAGACAGGGT GTGGAGGGCC GGGATGCCAC TGACCAGCAC ATCGTGGATG TGGCGCTGAA GATGCTGCAA GAGCAACTGG CAGAGGTCGC CGTGAGTGCC AAGCGGGAAG CCCTGGGTGC GGTGGGCATG ATGGGTCCTC CAGGACCTCC TGGGCCCCCT GGGTACCCAG GCAAGCAGGG CCCCCATGGG CACCCTGGCC CTCGGGGCGT TCCTGGCATC GTGGGAGCCG TGGGTCAGAT CGGCAACACG GGGCCCAAGG GAAAACGTGG AGAGAAGGGT GATCCAGGAG AAGTGGGACG GGGGCACCCC GGGATGCCTG GGCCCCCAGG GATCCCAGGA CTCCCTGGCC GGCCTGGCCA GGCAATCAAC GGCAAGGATG GAGATCGAGG GTCCCCAGGG GCTCCAGGAG AGGCAGGTCG ACCTGGCCTG CCAGGCCCTG TGGGGCTGCC GGGCTTCTGT GAACCTGCAG CCTGCCTTGG AGCTTCGGCC TATGCCTCTG CCCGCCTTAC AGAGCCTGGA TCCATCAAGG GGCCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016815333.1 |
CDS | 439..2226 |
Translation | |
Target ORF information:
RefSeq Version | XM_016959844.2 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes collagen type IX alpha 2 chain (COL9A2), transcript variant X3, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016959844.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGGGGATCC CTGGAGTCAA GGGCCAGCCC GGGCTTCCTG GTCCTCCTGG CCTTCCGGGC CCTGGTTTTG CTGGACCTCC TGGGCCGCCT GGACCTGTTG GCCTCCCTGG TGAGATTGGA ATCCGAGGCC CCAAGGGGGA CCCTGGACCA GATGGACCAT CAGGGCCCCC AGGACCCCCT GGGAAACCTG GTCGCCCGGG AACCATCCAG GGTCTGGAAG GCAGTGCGGA TTTCCTGTGT CCAACCAACT GTCCACCCGG AATGAAAGGT CCCCCAGGGC TGCAGGGAGT GAAGGGGCAT GCGGGCAAAC GCGGGGTTCT GGGTGATCCT GGGCGCCAGG GGAAGCCGGG TCCCAAGGGA GATGTGGGTG CCTCTGGAGA GCAAGGCATC CCTGGACCAC CGGGTCCCCA GGGCATCAGG GGCTACCCGG GCATGGCAGG GCCCAAGGGA GAGACGGGCC CTCATGGATA TAAAGGCATG GTGGGCGCTA TCGGTGCCAC TGGGCCACCG GGTGAGGAAG GTCCTAGGGG ACCGCCAGGC CGAGCTGGGG AGAAGGGTGA CGTGGGCAGC CCAGGTATTC GTGGACCCCA GGGGATCACA GGCCCGAAAG GAGCAACGGG CCCCCCAGGC ATCAACGGCA AGGATGGGAC CCCAGGCATG CCTGGCATGA AGGGCAGTGC AGGACAGGCG GGACGGCCCG GAAGTCCAGG CCACCAGGGC CTAGCGGGTG TGCCAGGCCA GCCTGGGACA AAAGGAGGCC CTGGAGACCA GGGTGAGCCG GGCCCGCAGG GCCTTCCTGG ATTCTCTGGT CCCCCTGGGA AAGAGGGAGA GCCAGGGCCT CGAGGAGAAA TTGGTCCCCA GGGCATCATG GGACAGAAGG GTGACCAAGG CGAGAGGGGT CCAGTGGGGC AACCAGGCCC TCAGGGAAGG CAGGGCCCTA AGGGGGAGCA GGGCCCCCCT GGAATTCCAG GGCCCCAAGG CTTGCCAGGC GTCAAAGGAG ACAAGGGCTC CCCAGGGAAG ACCGGGCCCC GCGGCAGAGT GGGTGACCCA GGGGTGGCCG GCCTCCCCGG AGAGAAAGGC GAGAAGGGCG AGTCCGGCGA GCCGGGGCCC AAGGGACAGC AAGGAGTACG TGGAGAACCC GGCTACCCTG GCCCCAGCGG GGATGCGGGC GCCCCAGGGA TTCAGGGCTA CCCTGGTCCC CCCGGCCCTC GAGGACTGGC CGGGAACCGA GGCGTGCCAG GACAGCCCGG GAGACAGGGT GTGGAGGGCC GGGATGCCAC TGACCAGCAC ATCGTGGATG TGGCGCTGAA GATGCTGCAA GAGCAACTGG CAGAGGTCGC CGTGAGTGCC AAGCGGGAAG CCCTGGGTGC GGTGGGCATG ATGGGTCCTC CAGGACCTCC TGGGCCCCCT GGGTACCCAG GCAAGCAGGG CCCCCATGGG CACCCTGGCC CTCGGGGCGT TCCTGGCATC GTGGGAGCCG TGGGTCAGAT CGGCAACACG GGGCCCAAGG GAAAACGTGG AGAGAAGGGT GATCCAGGAG AAGTGGGACG GGGGCACCCC GGGATGCCTG GGCCCCCAGG GATCCCAGGA CTCCCTGGCC GGCCTGGCCA GGCAATCAAC GGCAAGGATG GAGATCGAGG GTCCCCAGGG GCTCCAGGAG AGGCAGGTCG ACCTGGCCTG CCAGGCCCTG TGGGGCTGCC GGGCTTCTGT GAACCTGCAG CCTGCCTTGG AGCTTCGGCC TATGCCTCTG CCCGCCTTAC AGAGCCTGGA TCCATCAAGG GGCCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc92608 |
Clone ID Related Accession (Same CDS sequence) |
XM_016959852.2
|
Accession Version |
XM_016959852.2 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1764bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
collagen alpha-2(IX) chain isoform X4 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036879.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Mar 20, 2018 this sequence version replaced XM_016959852.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGCCCAGGG TATCTGACCC TCTGAGGCAT CCTGACCATC AACTCTCTGC TCCCCAGGGG CCGCCTGGAC CTGTTGGCCT CCCTGGTGAG ATTGGAATCC GAGGCCCCAA GGGGGACCCT GGACCAGATG GACCATCAGG GCCCCCAGGA CCCCCTGGGA AACCTGGTCG CCCGGGAACC ATCCAGGGTC TGGAAGGCAG TGCGGATTTC CTGTGTCCAA CCAACTGTCC ACCCGGAATG AAAGGTCCCC CAGGGCTGCA GGGAGTGAAG GGGCATGCGG GCAAACGCGG GGTTCTGGGT GATCCTGGGC GCCAGGGGAA GCCGGGTCCC AAGGGAGATG TGGGTGCCTC TGGAGAGCAA GGCATCCCTG GACCACCGGG TCCCCAGGGC ATCAGGGGCT ACCCGGGCAT GGCAGGGCCC AAGGGAGAGA CGGGCCCTCA TGGATATAAA GGCATGGTGG GCGCTATCGG TGCCACTGGG CCACCGGGTG AGGAAGGTCC TAGGGGACCG CCAGGCCGAG CTGGGGAGAA GGGTGACGTG GGCAGCCCAG GTATTCGTGG ACCCCAGGGG ATCACAGGCC CGAAAGGAGC AACGGGCCCC CCAGGCATCA ACGGCAAGGA TGGGACCCCA GGCATGCCTG GCATGAAGGG CAGTGCAGGA CAGGCGGGAC GGCCCGGAAG TCCAGGCCAC CAGGGCCTAG CGGGTGTGCC AGGCCAGCCT GGGACAAAAG GAGGCCCTGG AGACCAGGGT GAGCCGGGCC CGCAGGGCCT TCCTGGATTC TCTGGTCCCC CTGGGAAAGA GGGAGAGCCA GGGCCTCGAG GAGAAATTGG TCCCCAGGGC ATCATGGGAC AGAAGGGTGA CCAAGGCGAG AGGGGTCCAG TGGGGCAACC AGGCCCTCAG GGAAGGCAGG GCCCTAAGGG GGAGCAGGGC CCCCCTGGAA TTCCAGGGCC CCAAGGCTTG CCAGGCGTCA AAGGAGACAA GGGCTCCCCA GGGAAGACCG GGCCCCGCGG CAGAGTGGGT GACCCAGGGG TGGCCGGCCT CCCCGGAGAG AAAGGCGAGA AGGGCGAGTC CGGCGAGCCG GGGCCCAAGG GACAGCAAGG AGTACGTGGA GAACCCGGCT ACCCTGGCCC CAGCGGGGAT GCGGGCGCCC CAGGGATTCA GGGCTACCCT GGTCCCCCCG GCCCTCGAGG ACTGGCCGGG AACCGAGGCG TGCCAGGACA GCCCGGGAGA CAGGGTGTGG AGGGCCGGGA TGCCACTGAC CAGCACATCG TGGATGTGGC GCTGAAGATG CTGCAAGAGC AACTGGCAGA GGTCGCCGTG AGTGCCAAGC GGGAAGCCCT GGGTGCGGTG GGCATGATGG GTCCTCCAGG ACCTCCTGGG CCCCCTGGGT ACCCAGGCAA GCAGGGCCCC CATGGGCACC CTGGCCCTCG GGGCGTTCCT GGCATCGTGG GAGCCGTGGG TCAGATCGGC AACACGGGGC CCAAGGGAAA ACGTGGAGAG AAGGGTGATC CAGGAGAAGT GGGACGGGGG CACCCCGGGA TGCCTGGGCC CCCAGGGATC CCAGGACTCC CTGGCCGGCC TGGCCAGGCA ATCAACGGCA AGGATGGAGA TCGAGGGTCC CCAGGGGCTC CAGGAGAGGC AGGTCGACCT GGCCTGCCAG GCCCTGTGGG GCTGCCGGGC TTCTGTGAAC CTGCAGCCTG CCTTGGAGCT TCGGCCTATG CCTCTGCCCG CCTTACAGAG CCTGGATCCA TCAAGGGGCC TTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016815341.1 |
CDS | 1387..3150 |
Translation | |
Target ORF information:
RefSeq Version | XM_016959852.2 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes collagen type IX alpha 2 chain (COL9A2), transcript variant X4, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016959852.2 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741
| ATGCCCAGGG TATCTGACCC TCTGAGGCAT CCTGACCATC AACTCTCTGC TCCCCAGGGG CCGCCTGGAC CTGTTGGCCT CCCTGGTGAG ATTGGAATCC GAGGCCCCAA GGGGGACCCT GGACCAGATG GACCATCAGG GCCCCCAGGA CCCCCTGGGA AACCTGGTCG CCCGGGAACC ATCCAGGGTC TGGAAGGCAG TGCGGATTTC CTGTGTCCAA CCAACTGTCC ACCCGGAATG AAAGGTCCCC CAGGGCTGCA GGGAGTGAAG GGGCATGCGG GCAAACGCGG GGTTCTGGGT GATCCTGGGC GCCAGGGGAA GCCGGGTCCC AAGGGAGATG TGGGTGCCTC TGGAGAGCAA GGCATCCCTG GACCACCGGG TCCCCAGGGC ATCAGGGGCT ACCCGGGCAT GGCAGGGCCC AAGGGAGAGA CGGGCCCTCA TGGATATAAA GGCATGGTGG GCGCTATCGG TGCCACTGGG CCACCGGGTG AGGAAGGTCC TAGGGGACCG CCAGGCCGAG CTGGGGAGAA GGGTGACGTG GGCAGCCCAG GTATTCGTGG ACCCCAGGGG ATCACAGGCC CGAAAGGAGC AACGGGCCCC CCAGGCATCA ACGGCAAGGA TGGGACCCCA GGCATGCCTG GCATGAAGGG CAGTGCAGGA CAGGCGGGAC GGCCCGGAAG TCCAGGCCAC CAGGGCCTAG CGGGTGTGCC AGGCCAGCCT GGGACAAAAG GAGGCCCTGG AGACCAGGGT GAGCCGGGCC CGCAGGGCCT TCCTGGATTC TCTGGTCCCC CTGGGAAAGA GGGAGAGCCA GGGCCTCGAG GAGAAATTGG TCCCCAGGGC ATCATGGGAC AGAAGGGTGA CCAAGGCGAG AGGGGTCCAG TGGGGCAACC AGGCCCTCAG GGAAGGCAGG GCCCTAAGGG GGAGCAGGGC CCCCCTGGAA TTCCAGGGCC CCAAGGCTTG CCAGGCGTCA AAGGAGACAA GGGCTCCCCA GGGAAGACCG GGCCCCGCGG CAGAGTGGGT GACCCAGGGG TGGCCGGCCT CCCCGGAGAG AAAGGCGAGA AGGGCGAGTC CGGCGAGCCG GGGCCCAAGG GACAGCAAGG AGTACGTGGA GAACCCGGCT ACCCTGGCCC CAGCGGGGAT GCGGGCGCCC CAGGGATTCA GGGCTACCCT GGTCCCCCCG GCCCTCGAGG ACTGGCCGGG AACCGAGGCG TGCCAGGACA GCCCGGGAGA CAGGGTGTGG AGGGCCGGGA TGCCACTGAC CAGCACATCG TGGATGTGGC GCTGAAGATG CTGCAAGAGC AACTGGCAGA GGTCGCCGTG AGTGCCAAGC GGGAAGCCCT GGGTGCGGTG GGCATGATGG GTCCTCCAGG ACCTCCTGGG CCCCCTGGGT ACCCAGGCAA GCAGGGCCCC CATGGGCACC CTGGCCCTCG GGGCGTTCCT GGCATCGTGG GAGCCGTGGG TCAGATCGGC AACACGGGGC CCAAGGGAAA ACGTGGAGAG AAGGGTGATC CAGGAGAAGT GGGACGGGGG CACCCCGGGA TGCCTGGGCC CCCAGGGATC CCAGGACTCC CTGGCCGGCC TGGCCAGGCA ATCAACGGCA AGGATGGAGA TCGAGGGTCC CCAGGGGCTC CAGGAGAGGC AGGTCGACCT GGCCTGCCAG GCCCTGTGGG GCTGCCGGGC TTCTGTGAAC CTGCAGCCTG CCTTGGAGCT TCGGCCTATG CCTCTGCCCG CCTTACAGAG CCTGGATCCA TCAAGGGGCC TTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc59300 |
Clone ID Related Accession (Same CDS sequence) |
XM_016959838.1
|
Accession Version |
XM_016959838.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2286bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-06-01 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
collagen alpha-2(IX) chain isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006468.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Pan troglodytes Annotation Release 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281
| ATGGAGGTGG CTGAGCCGGA GAGTCAAACG GGACCCGTCC CGAGACGCGC GGCCCGGCCC GGGACAGGCA GCGTGGGGCA GGAGCTGGCG CCCGGTCCTG GCAGCCCGGG GAGCCCAGGT GGCGGGGCAT ACAATGGTGC TCATTCACCC GCTGCGCAGC CTCCGCCCCC GCCGCCTCCC AGGGGGCGCC GGCTCCAACC AGACGCCGCT GTCGCCCCGA GGCGGCCTCT CGGCCCTGCC CGTCTACCCA CGTCTCCCTT CCGAGGGCCG CCGGGGGCTG CGGGCGCGCG GAGAGGTCCA CCGGGAGAGC GGGGCCCCCC GGGTCCCCCG GGACCGCCGG GAGTGCCTGG ATCCGACGGC ATCGACGGTG ACAATGGGCC CCCTGGAAAA GCTGGCCCTC CGGGACCCAA GGGCGAGCCT GGCAAAGCTG GGCCAGATGG GCCAGACGGG AAGCCCGGGA TTGATGGTTT AACTGGAGCC AAGGGGGAGC CTGGCCCCAT GGGGATCCCT GGAGTCAAGG GCCAGCCCGG GCTTCCTGGT CCTCCTGGCC TTCCGGGCCC TGGTTTTGCT GGACCTCCTG GGCCGCCTGG ACCTGTTGGC CTCCCTGGTG AGATTGGAAT CCGAGGCCCC AAGGGGGACC CTGGACCAGA TGGACCATCA GGGCCCCCAG GACCCCCTGG GAAACCTGGT CGCCCGGGAA CCATCCAGGG TCTGGAAGGC AGTGCGGATT TCCTGTGTCC AACCAACTGT CCACCCGGAA TGAAAGGTCC CCCAGGGCTG CAGGGAGTGA AGGGGCATGC GGGCAAACGC GGGGTTCTGG GTGATCCTGG GCGCCAGGGG AAGCCGGGTC CCAAGGGAGA TGTGGGTGCC TCTGGAGAGC AAGGCATCCC TGGACCACCG GGTCCCCAGG GCATCAGGGG CTACCCGGGC ATGGCAGGGC CCAAGGGAGA GACGGGCCCT CATGGATATA AAGGCATGGT GGGCGCTATC GGTGCCACTG GGCCACCGGG TGAGGAAGGT CCTAGGGGAC CGCCAGGCCG AGCTGGGGAG AAGGGTGACG TGGGCAGCCC AGGTATTCGT GGACCCCAGG GGATCACAGG CCCGAAAGGA GCAACGGGCC CCCCAGGCAT CAACGGCAAG GATGGGACCC CAGGCATGCC TGGCATGAAG GGCAGTGCAG GACAGGCGGG ACGGCCCGGA AGTCCAGGCC ACCAGGGCCT AGCGGGTGTG CCAGGCCAGC CTGGGACAAA AGGAGGCCCT GGAGACCAGG GTGAGCCGGG CCCGCAGGGC CTTCCTGGAT TCTCTGGTCC CCCTGGGAAA GAGGGAGAGC CAGGGCCTCG AGGAGAAATT GGTCCCCAGG GCATCATGGG ACAGAAGGGT GACCAAGGCG AGAGGGGTCC AGTGGGGCAA CCAGGCCCTC AGGGAAGGCA GGGCCCTAAG GGGGAGCAGG GCCCCCCTGG AATTCCAGGG CCCCAAGGCT TGCCAGGCGT CAAAGGAGAC AAGGGCTCCC CAGGGAAGAC CGGGCCCCGC GGCAGAGTGG GTGACCCAGG GGTGGCCGGC CTCCCCGGAG AGAAAGGCGA GAAGGGCGAG TCCGGCGAGC CGGGGCCCAA GGGACAGCAA GGAGTACGTG GAGAACCCGG CTACCCTGGC CCCAGCGGGG ATGCGGGCGC CCCAGGGATT CAGGGCTACC CTGGTCCCCC CGGCCCTCGA GGACTGGCCG GGAACCGAGG CGTGCCAGGA CAGCCCGGGA GACAGGGTGT GGAGGGCCGG GATGCCACTG ACCAGCACAT CGTGGATGTG GCGCTGAAGA TGCTGCAAGA GCAACTGGCA GAGGTCGCCG TGAGTGCCAA GCGGGAAGCC CTGGGTGCGG TGGGCATGAT GGGTCCTCCA GGACCTCCTG GGCCCCCTGG GTACCCAGGA AAGCAGGGCC CCCATGGGCA CCCTGGCCCT CGGGGCGTTC CTGGCATCGT GGGAGCCGTG GGTCAGATCG GCAACACGGG GCCCAAGGGA AAACGTGGAG AGAAGGGTGA TCCAGGAGAA GTGGGACGGG GGCACCCCGG GATGCCTGGG CCCCCAGGGA TCCCAGGACT CCCTGGCCGG CCTGGCCAGG CAATCAACGG CAAGGATGGA GATCGAGGGT CCCCAGGGGC TCCAGGAGAG GCAGGTCGAC CTGGCCTGCC AGGCCCTGTG GGGCTGCCGG GCTTCTGTGA ACCTGCAGCC TGCCTTGGAG CTTCGGCCTA TGCCTCTGCC CGCCTTACAG AGCCTGGATC CATCAAGGGG CCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016815327.1 |
CDS | 138..2423 |
Translation | |
Target ORF information:
RefSeq Version | XM_016959838.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes collagen type IX alpha 2 (COL9A2), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016959838.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281
| ATGGAGGTGG CTGAGCCGGA GAGTCAAACG GGACCCGTCC CGAGACGCGC GGCCCGGCCC GGGACAGGCA GCGTGGGGCA GGAGCTGGCG CCCGGTCCTG GCAGCCCGGG GAGCCCAGGT GGCGGGGCAT ACAATGGTGC TCATTCACCC GCTGCGCAGC CTCCGCCCCC GCCGCCTCCC AGGGGGCGCC GGCTCCAACC AGACGCCGCT GTCGCCCCGA GGCGGCCTCT CGGCCCTGCC CGTCTACCCA CGTCTCCCTT CCGAGGGCCG CCGGGGGCTG CGGGCGCGCG GAGAGGTCCA CCGGGAGAGC GGGGCCCCCC GGGTCCCCCG GGACCGCCGG GAGTGCCTGG ATCCGACGGC ATCGACGGTG ACAATGGGCC CCCTGGAAAA GCTGGCCCTC CGGGACCCAA GGGCGAGCCT GGCAAAGCTG GGCCAGATGG GCCAGACGGG AAGCCCGGGA TTGATGGTTT AACTGGAGCC AAGGGGGAGC CTGGCCCCAT GGGGATCCCT GGAGTCAAGG GCCAGCCCGG GCTTCCTGGT CCTCCTGGCC TTCCGGGCCC TGGTTTTGCT GGACCTCCTG GGCCGCCTGG ACCTGTTGGC CTCCCTGGTG AGATTGGAAT CCGAGGCCCC AAGGGGGACC CTGGACCAGA TGGACCATCA GGGCCCCCAG GACCCCCTGG GAAACCTGGT CGCCCGGGAA CCATCCAGGG TCTGGAAGGC AGTGCGGATT TCCTGTGTCC AACCAACTGT CCACCCGGAA TGAAAGGTCC CCCAGGGCTG CAGGGAGTGA AGGGGCATGC GGGCAAACGC GGGGTTCTGG GTGATCCTGG GCGCCAGGGG AAGCCGGGTC CCAAGGGAGA TGTGGGTGCC TCTGGAGAGC AAGGCATCCC TGGACCACCG GGTCCCCAGG GCATCAGGGG CTACCCGGGC ATGGCAGGGC CCAAGGGAGA GACGGGCCCT CATGGATATA AAGGCATGGT GGGCGCTATC GGTGCCACTG GGCCACCGGG TGAGGAAGGT CCTAGGGGAC CGCCAGGCCG AGCTGGGGAG AAGGGTGACG TGGGCAGCCC AGGTATTCGT GGACCCCAGG GGATCACAGG CCCGAAAGGA GCAACGGGCC CCCCAGGCAT CAACGGCAAG GATGGGACCC CAGGCATGCC TGGCATGAAG GGCAGTGCAG GACAGGCGGG ACGGCCCGGA AGTCCAGGCC ACCAGGGCCT AGCGGGTGTG CCAGGCCAGC CTGGGACAAA AGGAGGCCCT GGAGACCAGG GTGAGCCGGG CCCGCAGGGC CTTCCTGGAT TCTCTGGTCC CCCTGGGAAA GAGGGAGAGC CAGGGCCTCG AGGAGAAATT GGTCCCCAGG GCATCATGGG ACAGAAGGGT GACCAAGGCG AGAGGGGTCC AGTGGGGCAA CCAGGCCCTC AGGGAAGGCA GGGCCCTAAG GGGGAGCAGG GCCCCCCTGG AATTCCAGGG CCCCAAGGCT TGCCAGGCGT CAAAGGAGAC AAGGGCTCCC CAGGGAAGAC CGGGCCCCGC GGCAGAGTGG GTGACCCAGG GGTGGCCGGC CTCCCCGGAG AGAAAGGCGA GAAGGGCGAG TCCGGCGAGC CGGGGCCCAA GGGACAGCAA GGAGTACGTG GAGAACCCGG CTACCCTGGC CCCAGCGGGG ATGCGGGCGC CCCAGGGATT CAGGGCTACC CTGGTCCCCC CGGCCCTCGA GGACTGGCCG GGAACCGAGG CGTGCCAGGA CAGCCCGGGA GACAGGGTGT GGAGGGCCGG GATGCCACTG ACCAGCACAT CGTGGATGTG GCGCTGAAGA TGCTGCAAGA GCAACTGGCA GAGGTCGCCG TGAGTGCCAA GCGGGAAGCC CTGGGTGCGG TGGGCATGAT GGGTCCTCCA GGACCTCCTG GGCCCCCTGG GTACCCAGGA AAGCAGGGCC CCCATGGGCA CCCTGGCCCT CGGGGCGTTC CTGGCATCGT GGGAGCCGTG GGTCAGATCG GCAACACGGG GCCCAAGGGA AAACGTGGAG AGAAGGGTGA TCCAGGAGAA GTGGGACGGG GGCACCCCGG GATGCCTGGG CCCCCAGGGA TCCCAGGACT CCCTGGCCGG CCTGGCCAGG CAATCAACGG CAAGGATGGA GATCGAGGGT CCCCAGGGGC TCCAGGAGAG GCAGGTCGAC CTGGCCTGCC AGGCCCTGTG GGGCTGCCGG GCTTCTGTGA ACCTGCAGCC TGCCTTGGAG CTTCGGCCTA TGCCTCTGCC CGCCTTACAG AGCCTGGATC CATCAAGGGG CCTTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.