Gene Symbol |
NLE1 |
Entrez Gene ID |
468214 |
Full Name |
notchless homolog 1 |
General protein information |
- Preferred Names
notchless homolog 1
Names
notchless protein homolog 1 Notchless gene homolog
|
Gene Type |
protein-coding |
Organism |
Pan troglodytes(chimpanzee) |
mRNA and Protein(s)
mRNA |
Protein |
Name |
NM_001280520.1 |
NP_001267449.1 |
notchless protein homolog 1 |
XM_016930598.1 |
XP_016786087.1 |
notchless protein homolog 1 isoform X1 |
Pan troglodytes (chimpanzee) |
NLE1 |
XP_001174396.2 |
|
NLE1 |
XP_001113853.1 |
Mus musculus (house mouse) |
Nle1 |
NP_663406.2 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP002221 |
XP_307962.4 |
Schizosaccharomyces pombe (fission yeast) |
SPCC18.05c |
NP_588384.1 |
Neurospora crassa |
NCU00794 |
XP_964950.1 |
Rattus norvegicus (Norway rat) |
Nle1 |
NP_001121006.1 |
Caenorhabditis elegans (roundworm) |
W07E6.2 |
NP_493745.1 |
Kluyveromyces lactis |
KLLA0C08547g |
XP_452581.1 |
Eremothecium gossypii |
AGOS_AER263C |
NP_985120.1 |
Homo sapiens (human) |
NLE1 |
NP_060566.2 |
Canis lupus familiaris (dog) |
NLE1 |
XP_005624858.1 |
Danio rerio (zebrafish) |
nle1 |
NP_001018418.1 |
Drosophila melanogaster (fruit fly) |
Nle |
NP_477294.2 |
Gallus gallus (chicken) |
NLE1 |
XP_415857.3 |
Saccharomyces cerevisiae (baker's yeast) |
RSA4 |
NP_009997.2 |
Oryza sativa (rice) |
Os11g0594200 |
NP_001068204.1 |
Bos taurus (cattle) |
NLE1 |
NP_001014887.1 |
Magnaporthe oryzae (rice blast fungus) |
MGG_08708 |
XP_003719269.1 |
Arabidopsis thaliana (thale cress) |
AT5G52820 |
NP_200094.1 |
Oryza sativa (rice) |
Os10g0104500 |
NP_001064020.1 |
Xenopus tropicalis (tropical clawed frog) |
nle1 |
NP_001072540.1 |
Related articles in PubMed
Major chimpanzee-specific structural changes in sperm development-associated genes.
Kim RN, Kim DW, Choi SH, Chae SH, Nam SH, Kim DW, Kim A, Kang A, Park KH, Lee YS, Hirai M, Suzuki Y, Sugano S, Hashimoto K, Kim DS, Park HS
Functional & integrative genomics11(3)507-17(2011 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following NLE1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the NLE1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OPc00761 |
Clone ID Related Accession (Same CDS sequence) |
NM_001280520.1
|
Accession Version |
NM_001280520.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1458bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-10-14 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
notchless protein homolog 1 |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AK305839.1. On Jul 22, 2013 this sequence version replaced XM_001174396.3.
##Evidence-Data-START##
Transcript exon combination :: AK305839.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN01120800, SAMN01120804 [ECO:0000348]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441
| ATGGCGGCGG CAGTGGCGGA CGAGGCGGTG GCGCGCGATG TGCAGCGGTT GCTAGTGCAG TTCCAGGATG AGGGCGGGCA GCTGCTGGGT TCCCCGTTCG ACGTGCCCGT GGACATCACC CCGGACAGGC TGCAGCTCGT GTGCAACGCG CTACTGGCCC AGGAGGATCC CCTGCCACTG GCTTTCTTTG TCCACGATGC TGAGATCGTC TCCTCACTGG GGAAGACGTT GGAGTCCCAG GCAGTGGAGA CAGAGAAGGT CCTAGACATC ATCTACCAGC CACAGGCTAT CTTCAGAGTC CGGGCTGTGA CTCGCTGCAC TAGCTCCTTG GAGGGTCACA GTGAGGCAGT CATTTCTGTG GCCTTCAGCC CCACGGGAAA GTACCTGGCC AGTGGCTCTG GAGACACCAC CGTGCGCTTC TGGGATCTCA GCACAGAGAC ACCACATTTC ACATGCAAGG GACACAGACA CTGGGTCCTT AGTATATCCT GGTCTCCAGA TGGCAAGAAG CTGGCCTCAG GCTGCAAGAA TGGCCAGATT CTCCTCTGGG ACCCAAGCAC AGGGAAGCAG GTGGGCAGGA CCCTCGCTGG CCACAGCAAG TGGATCACAG GCCTGAGCTG GGAGCCCCTC CATGCGAACC CTGAGTGCCG CTATGTGGCC AGCAGCTCCA AGGATGGCAG TGTGCGGATC TGGGACACAA CTGCAGGCCG CTGTGAGCGC ATCCTCACCG GGCACACCCA GTCGGTCACC TGTCTCCGGT GGGGAGGGGA CGGGCTTCTC TACTCTGCCT CCCAGGACCG CACCATCAAA GTCTGGAGAG CTCATGACGG TGTGCTGTGC CGGACTCTGC AAGGCCACGG CCACTGGGTG AACACCATGG CCCTCAGCAC TGACTATGCC CTGCGCACTG GGGCCTTTGA ACCTGCTGAG GCCTCAGTTA ATCCCCAAGA CCTCCAAGGA TCCTTGCAGA AGTTGAAGGA GAGGGCTCTG AGCCGATACA ACCTCGTGCG GGGCCAGGGT CCAGAGAGGC TGGTGTCTGG CTCCGACGAC TTCACCTTAT TCCTGTGGTC CCCAGCAGAG GACAAAAAGC CTCTCACTCG GATGACAGGA CACCAAGCTC TCATCAACCA GGTGCTCTTC TCTCCTGACT CCCGCATCGT GGCTAGTGCC TCCTTTGACA AGTCCATCAA GCTGTGGGAT GGCAGGACGG GCAAGTACCT GGCTTCCCTA CGCGGCCACG TGGCTGCCGT GTACCAGATT GCGTGGTCAG CTGACAGTCG GCTCCTGGTC AGTGGCAGCA GTGACAGCAC ACTGAAGGTG TGGGATGTGA AGGCCCAGAA GCTGGCCATG GACCTGCCCG GCCACGCGGA TGAGGTATAT GCTGTTGACT GGAGTCCAGA TGGCCAGAGA GTGGCAAGTG GTGGGAAGGA CAAATGCCTC CGGATATGGA GGAGATGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001267449.1 |
CDS | 16..1473 |
Translation | |
Target ORF information:
RefSeq Version | NM_001280520.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes notchless homolog 1 (NLE1), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001280520.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441
| ATGGCGGCGG CAGTGGCGGA CGAGGCGGTG GCGCGCGATG TGCAGCGGTT GCTAGTGCAG TTCCAGGATG AGGGCGGGCA GCTGCTGGGT TCCCCGTTCG ACGTGCCCGT GGACATCACC CCGGACAGGC TGCAGCTCGT GTGCAACGCG CTACTGGCCC AGGAGGATCC CCTGCCACTG GCTTTCTTTG TCCACGATGC TGAGATCGTC TCCTCACTGG GGAAGACGTT GGAGTCCCAG GCAGTGGAGA CAGAGAAGGT CCTAGACATC ATCTACCAGC CACAGGCTAT CTTCAGAGTC CGGGCTGTGA CTCGCTGCAC TAGCTCCTTG GAGGGTCACA GTGAGGCAGT CATTTCTGTG GCCTTCAGCC CCACGGGAAA GTACCTGGCC AGTGGCTCTG GAGACACCAC CGTGCGCTTC TGGGATCTCA GCACAGAGAC ACCACATTTC ACATGCAAGG GACACAGACA CTGGGTCCTT AGTATATCCT GGTCTCCAGA TGGCAAGAAG CTGGCCTCAG GCTGCAAGAA TGGCCAGATT CTCCTCTGGG ACCCAAGCAC AGGGAAGCAG GTGGGCAGGA CCCTCGCTGG CCACAGCAAG TGGATCACAG GCCTGAGCTG GGAGCCCCTC CATGCGAACC CTGAGTGCCG CTATGTGGCC AGCAGCTCCA AGGATGGCAG TGTGCGGATC TGGGACACAA CTGCAGGCCG CTGTGAGCGC ATCCTCACCG GGCACACCCA GTCGGTCACC TGTCTCCGGT GGGGAGGGGA CGGGCTTCTC TACTCTGCCT CCCAGGACCG CACCATCAAA GTCTGGAGAG CTCATGACGG TGTGCTGTGC CGGACTCTGC AAGGCCACGG CCACTGGGTG AACACCATGG CCCTCAGCAC TGACTATGCC CTGCGCACTG GGGCCTTTGA ACCTGCTGAG GCCTCAGTTA ATCCCCAAGA CCTCCAAGGA TCCTTGCAGA AGTTGAAGGA GAGGGCTCTG AGCCGATACA ACCTCGTGCG GGGCCAGGGT CCAGAGAGGC TGGTGTCTGG CTCCGACGAC TTCACCTTAT TCCTGTGGTC CCCAGCAGAG GACAAAAAGC CTCTCACTCG GATGACAGGA CACCAAGCTC TCATCAACCA GGTGCTCTTC TCTCCTGACT CCCGCATCGT GGCTAGTGCC TCCTTTGACA AGTCCATCAA GCTGTGGGAT GGCAGGACGG GCAAGTACCT GGCTTCCCTA CGCGGCCACG TGGCTGCCGT GTACCAGATT GCGTGGTCAG CTGACAGTCG GCTCCTGGTC AGTGGCAGCA GTGACAGCAC ACTGAAGGTG TGGGATGTGA AGGCCCAGAA GCTGGCCATG GACCTGCCCG GCCACGCGGA TGAGGTATAT GCTGTTGACT GGAGTCCAGA TGGCCAGAGA GTGGCAAGTG GTGGGAAGGA CAAATGCCTC CGGATATGGA GGAGATGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
OPc71506 |
Clone ID Related Accession (Same CDS sequence) |
XM_016930598.1
|
Accession Version |
XM_016930598.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1173bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2018-03-19 |
Organism |
Pan troglodytes(chimpanzee) |
Product |
notchless protein homolog 1 isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036896.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Pan troglodytes Annotation Release 105
Annotation Version :: 105
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141
| ATGAGGGCGG GCAGCTGCTG GGTTCCCCGT TCGACGTGCC CGTGGACATC ACCCCGGACA GGCTGCAGCT CGTGTGCAAC GCGCTACTGG CCCAGGTACC TGGCCAGTGG CTCTGGAGAC ACCACCGTGC GCTTCTGGGA TCTCAGCACA GAGACACCAC ATTTCACATG CAAGGGACAC AGACACTGGG TCCTTAGTAT ATCCTGGTCT CCAGATGGCA AGAAGCTGGC CTCAGGCTGC AAGAATGGCC AGATTCTCCT CTGGGACCCA AGCACAGGGA AGCAGGTGGG CAGGACCCTC GCTGGCCACA GCAAGTGGAT CACAGGCCTG AGCTGGGAGC CCCTCCATGC GAACCCTGAG TGCCGCTATG TGGCCAGCAG CTCCAAGGAT GGCAGTGTGC GGATCTGGGA CACAACTGCA GGCCGCTGTG AGCGCATCCT CACCGGGCAC ACCCAGTCGG TCACCTGTCT CCGGTGGGGA GGGGACGGGC TTCTCTACTC TGCCTCCCAG GACCGCACCA TCAAAGTCTG GAGAGCTCAT GACGGTGTGC TGTGCCGGAC TCTGCAAGGC CACGGCCACT GGGTGAACAC CATGGCCCTC AGCACTGACT ATGCCCTGCG CACTGGGGCC TTTGAACCTG CTGAGGCCTC AGTTAATCCC CAAGACCTCC AAGGATCCTT GCAGAAGTTG AAGGAGAGGG CTCTGAGCCG ATACAACCTC GTGCGGGGCC AGGGTCCAGA GAGGCTGGTG TCTGGCTCCG ACGACTTCAC CTTATTCCTG TGGTCCCCAG CAGAGGACAA AAAGCCTCTC ACTCGGATGA CAGGACACCA AGCTCTCATC AACCAGGTGC TCTTCTCTCC TGACTCCCGC ATCGTGGCTA GTGCCTCCTT TGACAAGTCC ATCAAGCTGT GGGATGGCAG GACGGGCAAG TACCTGGCTT CCCTACGCGG CCACGTGGCT GCCGTGTACC AGATTGCGTG GTCAGCTGAC AGTCGGCTCC TGGTCAGTGG CAGCAGTGAC AGCACACTGA AGGTGTGGGA TGTGAAGGCC CAGAAGCTGG CCATGGACCT GCCCGGCCAC GCGGATGAGG TATATGCTGT TGACTGGAGT CCAGATGGCC AGAGAGTGGC AAGTGGTGGG AAGGACAAAT GCCTCCGGAT ATGGAGGAGA TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_016786087.1 |
CDS | 149..1321 |
Translation | |
Target ORF information:
RefSeq Version | XM_016930598.1 |
Organism | Pan troglodytes(chimpanzee) |
Definition | Pan troglodytes notchless homolog 1 (NLE1), transcript variant X1, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_016930598.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141
| ATGAGGGCGG GCAGCTGCTG GGTTCCCCGT TCGACGTGCC CGTGGACATC ACCCCGGACA GGCTGCAGCT CGTGTGCAAC GCGCTACTGG CCCAGGTACC TGGCCAGTGG CTCTGGAGAC ACCACCGTGC GCTTCTGGGA TCTCAGCACA GAGACACCAC ATTTCACATG CAAGGGACAC AGACACTGGG TCCTTAGTAT ATCCTGGTCT CCAGATGGCA AGAAGCTGGC CTCAGGCTGC AAGAATGGCC AGATTCTCCT CTGGGACCCA AGCACAGGGA AGCAGGTGGG CAGGACCCTC GCTGGCCACA GCAAGTGGAT CACAGGCCTG AGCTGGGAGC CCCTCCATGC GAACCCTGAG TGCCGCTATG TGGCCAGCAG CTCCAAGGAT GGCAGTGTGC GGATCTGGGA CACAACTGCA GGCCGCTGTG AGCGCATCCT CACCGGGCAC ACCCAGTCGG TCACCTGTCT CCGGTGGGGA GGGGACGGGC TTCTCTACTC TGCCTCCCAG GACCGCACCA TCAAAGTCTG GAGAGCTCAT GACGGTGTGC TGTGCCGGAC TCTGCAAGGC CACGGCCACT GGGTGAACAC CATGGCCCTC AGCACTGACT ATGCCCTGCG CACTGGGGCC TTTGAACCTG CTGAGGCCTC AGTTAATCCC CAAGACCTCC AAGGATCCTT GCAGAAGTTG AAGGAGAGGG CTCTGAGCCG ATACAACCTC GTGCGGGGCC AGGGTCCAGA GAGGCTGGTG TCTGGCTCCG ACGACTTCAC CTTATTCCTG TGGTCCCCAG CAGAGGACAA AAAGCCTCTC ACTCGGATGA CAGGACACCA AGCTCTCATC AACCAGGTGC TCTTCTCTCC TGACTCCCGC ATCGTGGCTA GTGCCTCCTT TGACAAGTCC ATCAAGCTGT GGGATGGCAG GACGGGCAAG TACCTGGCTT CCCTACGCGG CCACGTGGCT GCCGTGTACC AGATTGCGTG GTCAGCTGAC AGTCGGCTCC TGGTCAGTGG CAGCAGTGAC AGCACACTGA AGGTGTGGGA TGTGAAGGCC CAGAAGCTGG CCATGGACCT GCCCGGCCAC GCGGATGAGG TATATGCTGT TGACTGGAGT CCAGATGGCC AGAGAGTGGC AAGTGGTGGG AAGGACAAAT GCCTCCGGAT ATGGAGGAGA TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
Major chimpanzee-specific structural changes in sperm development-associated genes.
Functional & integrative genomics11(3)507-17(2011 Sep)
Kim RN,Kim DW,Choi SH,Chae SH,Nam SH,Kim DW,Kim A,Kang A,Park KH,Lee YS,Hirai M,Suzuki Y,Sugano S,Hashimoto K,Kim DS,Park HS |