Gene Symbol | LOC100912380 |
Entrez Gene ID | 100912380 |
Full Name | calpain small subunit 1-like |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » LOC100912380 cDNA ORF clone
gRNAs
Gene Symbol | LOC100912380 |
Entrez Gene ID | 100912380 |
Full Name | calpain small subunit 1-like |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017590031.1 | XP_017445520.1 | calpain small subunit 1 |
LOC712561 | XP_002808235.1 | |
Rattus norvegicus (Norway rat) | LOC100911363 | XP_003748884.1 |
Danio rerio (zebrafish) | capns1a | NP_001017899.2 |
Danio rerio (zebrafish) | capns1b | NP_001103176.1 |
Homo sapiens (human) | CAPNS1 | NP_001003962.1 |
Pan troglodytes (chimpanzee) | CAPNS1 | XP_003953505.1 |
Xenopus tropicalis (tropical clawed frog) | capns2 | NP_001016161.1 |
Canis lupus familiaris (dog) | CAPNS1 | XP_853634.1 |
Mus musculus (house mouse) | Capns1 | NP_033925.2 |
Rattus norvegicus (Norway rat) | Capns1 | NP_058814.1 |
Bos taurus (cattle) | CAPNS1 | NP_776686.1 |
Rattus norvegicus (Norway rat) | LOC100912380 | XP_003748875.2 |
Primary sequences of rat mu-calpain large and small subunits are, respectively, moderately and highly similar to those of human.
Sorimachi H, Amano S, Ishiura S, Suzuki K
Biochimica et biophysica acta1309(1-2)37-41(1996 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100912380 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100912380 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa13099 | |
Clone ID Related Accession (Same CDS sequence) | XM_017590031.1 | |
Accession Version | XM_017590031.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | calpain small subunit 1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) and transcript sequence (U53859.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 157 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTTCTTGG TGAATTCGTT CTTGAAGGGC GGCGGTGGCG GTGGGGGAGG CGGGGGTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017445520.1 |
CDS | 188..1000 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGTTCTTGG TGAATTCGTT CTTGAAGGGC GGCGGTGGCG GTGGGGGAGG CGGGGGTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Primary sequences of rat mu-calpain large and small subunits are, respectively, moderately and highly similar to those of human. |