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Hoxa4 cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Hoxa4
Entrez Gene ID 100912525
Full Name homeo box A4
Synonyms Hox1r2,hox1.4
General protein information
Preferred Names

homeo box A4

Names

homeobox protein Hox-A4
Homeobox gene A4
homeobox A4-like
homeobox protein Hox-A4-like
homeobox protein R2
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

4

4q24
Summary The protein encoded by this gene is likely a homeobox transcription factor. [provided by RefSeq, Sep 2015].

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_003749748.3 XP_003749796.1 homeobox protein Hox-A4
NM_024350.1 NP_077326.1 homeobox protein Hox-A4

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) HOXA4 XP_001162640.1
Bos taurus (cattle) HOXA4 NP_001069602.2
Gallus gallus (chicken) HOXA4 NP_001025517.1
Rattus norvegicus (Norway rat) LOC100360577 XP_002729358.1
Gallus gallus (chicken) LOC100858429 XP_003643203.2
Mus musculus (house mouse) Hoxa4 NP_032291.1
Rattus norvegicus (Norway rat) LOC100912525 XP_003749796.1
Homo sapiens (human) HOXA4 NP_002132.3
Canis lupus familiaris (dog) HOXA4 XP_539486.3
Gallus gallus (chicken) LOC100858374 XP_003640746.1
Xenopus tropicalis (tropical clawed frog) hoxa4 XP_004915454.1

Gene Ontology


Bibliography

Related articles in PubMed

Functional comparison of the Hoxa 4, Hoxa 10, and Hoxa 11 homeoboxes.
Zhao Y, Potter SS
Developmental biology244(1)21-36(2002 Apr)

Cloning of rat homeobox genes.
Sakoyama Y, Mizuta I, Ogasawara N, Yoshikawa H
Biochemical genetics32(9-10)351-60(1994 Oct)

Targeted disruptions of the murine Hoxa-4 and Hoxa-6 genes result in homeotic transformations of components of the vertebral column.
Kostic D, Capecchi MR
Mechanisms of development46(3)231-47(1994 Jun)

Cloning and sequence analysis of homeobox transcription factor cDNAs with an inosine-containing probe.
Gorski DH, LePage DF, Walsh K
BioTechniques16(5)856-8, 860-2, 865(1994 May)

Chromosomal assignment of seven rat homeobox genes to rat chromosomes 3, 4, 7, and 10.
Chung SY, Dai PH, Lei J, Riviere M, Levan G, Szpirer J, Szpirer C
Mammalian genome : official journal of the International Mammalian Genome Society4(9)537-40(1993 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Hoxa4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Hoxa4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa27276 NM_024350.1
Latest version!		 Rattus norvegicus homeo box A4 (Hoxa4), mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $139.30
$199.00
ORa27276 XM_003749748.3
Latest version!		 Rattus norvegicus homeo box A4 (Hoxa4), mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $139.30
$199.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa27276
Clone ID Related Accession (Same CDS sequence) XM_003749748.3 , NM_024350.1
Accession Version NM_024350.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 858bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-09-24
Organism Rattus norvegicus(Norway rat)
Product homeobox protein Hox-A4
Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07073021.1. Sequence Note: This RefSeq record was created genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments and orthologous data. ##Evidence-Data-START## Transcript exon combination :: CK366967.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01906347, SAMN01906348 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGACCATGA GCTCGTTTTT GATAAACTCC AACTACATCG AGCCCAAGTT CCCTCCCTTC 
GAGGAGTTCG CACCGCACGG TGGCCCGGGC GGTGGGGACG GCGGCGTGGG CGGGGGTCCC 
GGCTACCCGC GGCCTCAGAG CTCCCCGCAC CTGCCGGCCC CGAACCCGCA CGCGGCCCGA 
CAGACCCCCG CATACTACGC GCCAAGGGCG CGCGAGCCCA GCTACCACGG GGGCCTGTAC 
CCCGCGCCCG CCGCCGCCTG TCCCTACGCC TGTCGCGGGG CCAGCCCCGC GCGACCCGAG 
CAGTCCCCGG CCCCCGGCGC GCATCCCAGC CCGGCCCCGC AGCCCCCTGC GCCCCCTCGG 
CGCTGCGCTC CGGGCCCCAC CACCCCGGCT GTCGCGACGG GGGGCAGCGC CCCCGCGTGC 
CCGCTGCTGC TGGCGGACCA GGGCCCCGCG GGCCCGAAGG GCAAGGAGCC GGTGGTGTAC 
CCCTGGATGA AGAAGATCCA CGTGAGCGCC GTCAACCCCA GTTATAACGG AGGTGAGCCC 
AAGCGCTCTC GAACCGCCTA TACCCGGCAG CAAGTCTTGG AGCTGGAGAA GGAATTCCAC 
TTTAACCGAT ACCTGACCCG GCGCCGCCGC ATCGAGATCG CTCACACGCT CTGCTTGTCC 
GAGCGCCAGG TCAAGATCTG GTTCCAGAAC CGGAGAATGA AGTGGAAGAA AGACCACAAA 
CTTCCCAACA CCAAGATGCG ATCTTCCAAC CCTGCCTCGG CCCCTGCCGG CCCGCCTGGG 
AAAGCACAAA CTCACAGCCC ACACCCCCAT CCCCACCCTC TCCCCGGTGC TTCCACACCC 
ATTCCCTCGT CTATATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_077326.1
CDS5..862
Translation

Target ORF information:

RefSeq Version NM_024350.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus homeo box A4 (Hoxa4), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_024350.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGACCATGA GCTCGTTTTT GATAAACTCC AACTACATCG AGCCCAAGTT CCCTCCCTTC 
GAGGAGTTCG CACCGCACGG TGGCCCGGGC GGTGGGGACG GCGGCGTGGG CGGGGGTCCC 
GGCTACCCGC GGCCTCAGAG CTCCCCGCAC CTGCCGGCCC CGAACCCGCA CGCGGCCCGA 
CAGACCCCCG CATACTACGC GCCAAGGGCG CGCGAGCCCA GCTACCACGG GGGCCTGTAC 
CCCGCGCCCG CCGCCGCCTG TCCCTACGCC TGTCGCGGGG CCAGCCCCGC GCGACCCGAG 
CAGTCCCCGG CCCCCGGCGC GCATCCCAGC CCGGCCCCGC AGCCCCCTGC GCCCCCTCGG 
CGCTGCGCTC CGGGCCCCAC CACCCCGGCT GTCGCGACGG GGGGCAGCGC CCCCGCGTGC 
CCGCTGCTGC TGGCGGACCA GGGCCCCGCG GGCCCGAAGG GCAAGGAGCC GGTGGTGTAC 
CCCTGGATGA AGAAGATCCA CGTGAGCGCC GTCAACCCCA GTTATAACGG AGGTGAGCCC 
AAGCGCTCTC GAACCGCCTA TACCCGGCAG CAAGTCTTGG AGCTGGAGAA GGAATTCCAC 
TTTAACCGAT ACCTGACCCG GCGCCGCCGC ATCGAGATCG CTCACACGCT CTGCTTGTCC 
GAGCGCCAGG TCAAGATCTG GTTCCAGAAC CGGAGAATGA AGTGGAAGAA AGACCACAAA 
CTTCCCAACA CCAAGATGCG ATCTTCCAAC CCTGCCTCGG CCCCTGCCGG CCCGCCTGGG 
AAAGCACAAA CTCACAGCCC ACACCCCCAT CCCCACCCTC TCCCCGGTGC TTCCACACCC 
ATTCCCTCGT CTATATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa27276
Clone ID Related Accession (Same CDS sequence) XM_003749748.3 , NM_024350.1
Accession Version XM_003749748.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 858bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product homeobox protein Hox-A4
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_003749748.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGACCATGA GCTCGTTTTT GATAAACTCC AACTACATCG AGCCCAAGTT CCCTCCCTTC 
GAGGAGTTCG CACCGCACGG TGGCCCGGGC GGTGGGGACG GCGGCGTGGG CGGGGGTCCC 
GGCTACCCGC GGCCTCAGAG CTCCCCGCAC CTGCCGGCCC CGAACCCGCA CGCGGCCCGA 
CAGACCCCCG CATACTACGC GCCAAGGGCG CGCGAGCCCA GCTACCACGG GGGCCTGTAC 
CCCGCGCCCG CCGCCGCCTG TCCCTACGCC TGTCGCGGGG CCAGCCCCGC GCGACCCGAG 
CAGTCCCCGG CCCCCGGCGC GCATCCCAGC CCGGCCCCGC AGCCCCCTGC GCCCCCTCGG 
CGCTGCGCTC CGGGCCCCAC CACCCCGGCT GTCGCGACGG GGGGCAGCGC CCCCGCGTGC 
CCGCTGCTGC TGGCGGACCA GGGCCCCGCG GGCCCGAAGG GCAAGGAGCC GGTGGTGTAC 
CCCTGGATGA AGAAGATCCA CGTGAGCGCC GTCAACCCCA GTTATAACGG AGGTGAGCCC 
AAGCGCTCTC GAACCGCCTA TACCCGGCAG CAAGTCTTGG AGCTGGAGAA GGAATTCCAC 
TTTAACCGAT ACCTGACCCG GCGCCGCCGC ATCGAGATCG CTCACACGCT CTGCTTGTCC 
GAGCGCCAGG TCAAGATCTG GTTCCAGAAC CGGAGAATGA AGTGGAAGAA AGACCACAAA 
CTTCCCAACA CCAAGATGCG ATCTTCCAAC CCTGCCTCGG CCCCTGCCGG CCCGCCTGGG 
AAAGCACAAA CTCACAGCCC ACACCCCCAT CCCCACCCTC TCCCCGGTGC TTCCACACCC 
ATTCCCTCGT CTATATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_003749796.1
CDS78..935
Translation

Target ORF information:

RefSeq Version XM_003749748.3
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus homeo box A4 (Hoxa4), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_003749748.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGACCATGA GCTCGTTTTT GATAAACTCC AACTACATCG AGCCCAAGTT CCCTCCCTTC 
GAGGAGTTCG CACCGCACGG TGGCCCGGGC GGTGGGGACG GCGGCGTGGG CGGGGGTCCC 
GGCTACCCGC GGCCTCAGAG CTCCCCGCAC CTGCCGGCCC CGAACCCGCA CGCGGCCCGA 
CAGACCCCCG CATACTACGC GCCAAGGGCG CGCGAGCCCA GCTACCACGG GGGCCTGTAC 
CCCGCGCCCG CCGCCGCCTG TCCCTACGCC TGTCGCGGGG CCAGCCCCGC GCGACCCGAG 
CAGTCCCCGG CCCCCGGCGC GCATCCCAGC CCGGCCCCGC AGCCCCCTGC GCCCCCTCGG 
CGCTGCGCTC CGGGCCCCAC CACCCCGGCT GTCGCGACGG GGGGCAGCGC CCCCGCGTGC 
CCGCTGCTGC TGGCGGACCA GGGCCCCGCG GGCCCGAAGG GCAAGGAGCC GGTGGTGTAC 
CCCTGGATGA AGAAGATCCA CGTGAGCGCC GTCAACCCCA GTTATAACGG AGGTGAGCCC 
AAGCGCTCTC GAACCGCCTA TACCCGGCAG CAAGTCTTGG AGCTGGAGAA GGAATTCCAC 
TTTAACCGAT ACCTGACCCG GCGCCGCCGC ATCGAGATCG CTCACACGCT CTGCTTGTCC 
GAGCGCCAGG TCAAGATCTG GTTCCAGAAC CGGAGAATGA AGTGGAAGAA AGACCACAAA 
CTTCCCAACA CCAAGATGCG ATCTTCCAAC CCTGCCTCGG CCCCTGCCGG CCCGCCTGGG 
AAAGCACAAA CTCACAGCCC ACACCCCCAT CCCCACCCTC TCCCCGGTGC TTCCACACCC 
ATTCCCTCGT CTATATAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Functional comparison of the Hoxa 4, Hoxa 10, and Hoxa 11 homeoboxes.
Developmental biology244(1)21-36(2002 Apr)
Zhao Y,Potter SS


book

Cloning of rat homeobox genes.
Biochemical genetics32(9-10)351-60(1994 Oct)
Sakoyama Y,Mizuta I,Ogasawara N,Yoshikawa H


book

Targeted disruptions of the murine Hoxa-4 and Hoxa-6 genes result in homeotic transformations of components of the vertebral column.
Mechanisms of development46(3)231-47(1994 Jun)
Kostic D,Capecchi MR


book

Cloning and sequence analysis of homeobox transcription factor cDNAs with an inosine-containing probe.
BioTechniques16(5)856-8, 860-2, 865(1994 May)
Gorski DH,LePage DF,Walsh K


book

Chromosomal assignment of seven rat homeobox genes to rat chromosomes 3, 4, 7, and 10.
Mammalian genome : official journal of the International Mammalian Genome Society4(9)537-40(1993 Sep)
Chung SY,Dai PH,Lei J,Riviere M,Levan G,Szpirer J,Szpirer C