Gene Symbol
Rps15a
Entrez Gene ID
117053
Full Name
ribosomal protein S15a
General protein information
Preferred Namesribosomal protein S15a
Names40S ribosomal protein S15a
Gene Type
protein-coding
Organism
Rattus norvegicus(Norway rat)
Genome
Chromosome: 1
Map Location: 1q35
Summary
40S ribosomal subunit protein [RGD, Feb 2006].
mRNA and Protein(s)
mRNA
Protein
Name
NM_053982.1
NP_446434.1
40S ribosomal protein S15a
XM_006230098.2
XP_006230160.1
40S ribosomal protein S15a isoform X1
XM_006230097.2
XP_006230159.1
40S ribosomal protein S15a isoform X1
Gallus gallus (chicken)
RPS15A
XP_003642170.1
Drosophila melanogaster (fruit fly)
RpS15Ab
NP_610616.1
Kluyveromyces lactis
KLLA0B07931g
XP_451883.2
Neurospora crassa
NCU06431
XP_957322.1
Arabidopsis thaliana (thale cress)
AT2G39590
NP_181491.1
Canis lupus familiaris (dog)
RPS15A
NP_001239076.1
Mus musculus (house mouse)
Rps15a
NP_733769.1
Anopheles gambiae (African malaria mosquito)
AgaP_AGAP000541
XP_003437026.1
Eremothecium gossypii
AGOS_AEL151C
NP_984710.1
Magnaporthe oryzae (rice blast fungus)
MGG_06479
XP_003717084.1
Homo sapiens (human)
RPS15A
NP_001025180.1
Bos taurus (cattle)
RPS15A
XP_002694888.3
Drosophila melanogaster (fruit fly)
RpS15Aa
NP_727693.1
Caenorhabditis elegans (roundworm)
rps-22
NP_497481.1
Saccharomyces cerevisiae (baker's yeast)
RPS22A
NP_012345.1
Kluyveromyces lactis
KLLA0B07601g
XP_451868.1
Eremothecium gossypii
AGOS_AFR579W
NP_986126.1
Schizosaccharomyces pombe (fission yeast)
rps2201
NP_593234.1
Schizosaccharomyces pombe (fission yeast)
rps2202
NP_593367.1
LOC702174
XP_001093824.1
Danio rerio (zebrafish)
rps15a
NP_997927.1
Anopheles gambiae (African malaria mosquito)
AgaP_AGAP009572
XP_318584.1
Saccharomyces cerevisiae (baker's yeast)
RPS22B
NP_013471.1
Xenopus tropicalis (tropical clawed frog)
rps15a
NP_001096489.1
Pan troglodytes (chimpanzee)
RPS15A
NP_001238921.1
Rattus norvegicus (Norway rat)
Rps15a
NP_446434.1
Related articles in PubMed
SILAC-based proteomics of human primary endothelial cell morphogenesis unveils tumor angiogenic markers.
Zanivan S, Maione F, Hein MY, Hernández-Fernaud JR, Ostasiewicz P, Giraudo E, Mann M Molecular & cellular proteomics : MCP12(12)3599-611(2013 Dec)
Structures of the human and Drosophila 80S ribosome.
Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R Nature497(7447)80-5(2013 May)
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW Cell149(6)1393-406(2012 Jun)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanhäusser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M Molecular cell46(5)674-90(2012 Jun)
Functional dichotomy of ribosomal proteins during the synthesis of mammalian 40S ribosomal subunits.
O'Donohue MF, Choesmel V, Faubladier M, Fichant G, Gleizes PE The Journal of cell biology190(5)853-66(2010 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Rps15a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rps15a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
ORa11252
Clone ID Related Accession (Same CDS sequence)
NM_053982.1
, XM_006230098.2
, XM_006230097.2
Accession Version
NM_053982.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 393bp)
Protein sequence
SNP
Vector
pcDNA3.1-C-(k)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-12-23
Organism
Rattus norvegicus(Norway rat)
Product
40S ribosomal protein S15a
Comment
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X77953.1. On Dec 17, 2003 this sequence version replaced XM_212877.2.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: X77953.1, FQ223930.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMN01906347, SAMN01906348 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_446434.1
CDS 10..402
Translation
Target ORF information:
RefSeq Version NM_053982.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus ribosomal protein S15a (Rps15a), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_053982.1
ORF Insert Sequence:
1 61 121 181 241 301 361 ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa11252
Clone ID Related Accession (Same CDS sequence)
NM_053982.1
, XM_006230098.2
, XM_006230097.2
Accession Version
XM_006230098.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 393bp)
Protein sequence
SNP
Vector
pcDNA3.1-C-(k)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
40S ribosomal protein S15a isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jul 26, 2016 this sequence version replaced XM_006230098.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006230160.1
CDS 100..492
Translation
Target ORF information:
RefSeq Version XM_006230098.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus ribosomal protein S15a (Rps15a), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006230098.2
ORF Insert Sequence:
1 61 121 181 241 301 361 ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa11252
Clone ID Related Accession (Same CDS sequence)
NM_053982.1
, XM_006230098.2
, XM_006230097.2
Accession Version
XM_006230097.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 393bp)
Protein sequence
SNP
Vector
pcDNA3.1-C-(k)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
40S ribosomal protein S15a isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jul 26, 2016 this sequence version replaced XM_006230097.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006230159.1
CDS 57..449
Translation
Target ORF information:
RefSeq Version XM_006230097.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus ribosomal protein S15a (Rps15a), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006230097.2
ORF Insert Sequence:
1 61 121 181 241 301 361 ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Cell149(6)1393-406(2012 Jun)
Castello A,Fischer B,Eichelbaum K,Horos R,Beckmann BM,Strein C,Davey NE,Humphreys DT,Preiss T,Steinmetz LM,Krijgsveld J,Hentze MW
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Molecular cell46(5)674-90(2012 Jun)
Baltz AG,Munschauer M,Schwanhäusser B,Vasile A,Murakawa Y,Schueler M,Youngs N,Penfold-Brown D,Drew K,Milek M,Wyler E,Bonneau R,Selbach M,Dieterich C,Landthaler M