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Rps15a cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Rps15a
Entrez Gene ID 117053
Full Name ribosomal protein S15a
General protein information
Preferred Names

ribosomal protein S15a

Names

40S ribosomal protein S15a
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

1

1q35
Summary 40S ribosomal subunit protein [RGD, Feb 2006].

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_053982.1 NP_446434.1 40S ribosomal protein S15a
XM_006230098.2 XP_006230160.1 40S ribosomal protein S15a isoform X1
XM_006230097.2 XP_006230159.1 40S ribosomal protein S15a isoform X1

Pathways from BioSystems


Homologies


Gallus gallus (chicken) RPS15A XP_003642170.1
Drosophila melanogaster (fruit fly) RpS15Ab NP_610616.1
Kluyveromyces lactis KLLA0B07931g XP_451883.2
Neurospora crassa NCU06431 XP_957322.1
Arabidopsis thaliana (thale cress) AT2G39590 NP_181491.1
Canis lupus familiaris (dog) RPS15A NP_001239076.1
Mus musculus (house mouse) Rps15a NP_733769.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP000541 XP_003437026.1
Eremothecium gossypii AGOS_AEL151C NP_984710.1
Magnaporthe oryzae (rice blast fungus) MGG_06479 XP_003717084.1
Homo sapiens (human) RPS15A NP_001025180.1
Bos taurus (cattle) RPS15A XP_002694888.3
Drosophila melanogaster (fruit fly) RpS15Aa NP_727693.1
Caenorhabditis elegans (roundworm) rps-22 NP_497481.1
Saccharomyces cerevisiae (baker's yeast) RPS22A NP_012345.1
Kluyveromyces lactis KLLA0B07601g XP_451868.1
Eremothecium gossypii AGOS_AFR579W NP_986126.1
Schizosaccharomyces pombe (fission yeast) rps2201 NP_593234.1
Schizosaccharomyces pombe (fission yeast) rps2202 NP_593367.1
LOC702174 XP_001093824.1
Danio rerio (zebrafish) rps15a NP_997927.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP009572 XP_318584.1
Saccharomyces cerevisiae (baker's yeast) RPS22B NP_013471.1
Xenopus tropicalis (tropical clawed frog) rps15a NP_001096489.1
Pan troglodytes (chimpanzee) RPS15A NP_001238921.1
Rattus norvegicus (Norway rat) Rps15a NP_446434.1

Gene Ontology


Bibliography

Related articles in PubMed

SILAC-based proteomics of human primary endothelial cell morphogenesis unveils tumor angiogenic markers.
Zanivan S, Maione F, Hein MY, Hern?ndez-Fernaud JR, Ostasiewicz P, Giraudo E, Mann M
Molecular & cellular proteomics : MCP12(12)3599-611(2013 Dec)

Structures of the human and Drosophila 80S ribosome.
Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R
Nature497(7447)80-5(2013 May)

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)

Functional dichotomy of ribosomal proteins during the synthesis of mammalian 40S ribosomal subunits.
O'Donohue MF, Choesmel V, Faubladier M, Fichant G, Gleizes PE
The Journal of cell biology190(5)853-66(2010 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Rps15a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rps15a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa11252 NM_053982.1
Latest version!		 Rattus norvegicus ribosomal protein S15a (Rps15a), mRNA. pcDNA3.1-C-(k)DYK or customized vector 5-7 $69.30
$99.00
ORa11252 XM_006230098.2
Latest version!		 Rattus norvegicus ribosomal protein S15a (Rps15a), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 5-7 $69.30
$99.00
ORa11252 XM_006230097.2
Latest version!		 Rattus norvegicus ribosomal protein S15a (Rps15a), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 5-7 $69.30
$99.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa11252
Clone ID Related Accession (Same CDS sequence) NM_053982.1 , XM_006230098.2 , XM_006230097.2
Accession Version NM_053982.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 393bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2019-12-23
Organism Rattus norvegicus(Norway rat)
Product 40S ribosomal protein S15a
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X77953.1. On Dec 17, 2003 this sequence version replaced XM_212877.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: X77953.1, FQ223930.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01906347, SAMN01906348 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG 
GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG 
ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG 
ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT 
GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT 
TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT 
ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_446434.1
CDS10..402
Translation

Target ORF information:

RefSeq Version NM_053982.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus ribosomal protein S15a (Rps15a), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_053982.1

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG 
GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG 
ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG 
ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT 
GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT 
TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT 
ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa11252
Clone ID Related Accession (Same CDS sequence) NM_053982.1 , XM_006230098.2 , XM_006230097.2
Accession Version XM_006230098.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 393bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product 40S ribosomal protein S15a isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006230098.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG 
GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG 
ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG 
ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT 
GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT 
TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT 
ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006230160.1
CDS100..492
Translation

Target ORF information:

RefSeq Version XM_006230098.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus ribosomal protein S15a (Rps15a), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006230098.2

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG 
GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG 
ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG 
ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT 
GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT 
TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT 
ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa11252
Clone ID Related Accession (Same CDS sequence) NM_053982.1 , XM_006230098.2 , XM_006230097.2
Accession Version XM_006230097.2 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 393bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product 40S ribosomal protein S15a isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006230097.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG 
GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG 
ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG 
ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT 
GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT 
TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT 
ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006230159.1
CDS57..449
Translation

Target ORF information:

RefSeq Version XM_006230097.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus ribosomal protein S15a (Rps15a), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006230097.2

ORF Insert Sequence:

1
61
121
181
241
301
361
ATGGTGCGAA TGAATGTTCT GGCAGATGCT CTCAAGAGCA TCAACAACGC GGAGAAGAGG 
GGCAAACGCC AGGTCCTCAT CAGGCCGTGT TCCAAAGTCA TCGTTCGGTT CCTAACTGTG 
ATGATGAAGC ATGGCTACAT TGGTGAATTC GAGATCATTG ATGATCACAG AGCTGGGAAG 
ATTGTTGTGA ACCTCACAGG AAGGTTGAAC AAGTGTGGAG TTATAAGCCC TAGATTTGAT 
GTTCAACTCA AAGACCTAGA GAAGTGGCAG AACAATCTGC TCCCATCACG GCAGTTTGGT 
TTCATTGTGC TGACGACCTC GGCTGGCATC ATGGACCATG AAGAGGCAAG ACGAAAACAT 
ACAGGAGGGA AAATCCTGGG ATTCTTTTTT TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

SILAC-based proteomics of human primary endothelial cell morphogenesis unveils tumor angiogenic markers.
Molecular & cellular proteomics : MCP12(12)3599-611(2013 Dec)
Zanivan S,Maione F,Hein MY,Hern?ndez-Fernaud JR,Ostasiewicz P,Giraudo E,Mann M


book

Structures of the human and Drosophila 80S ribosome.
Nature497(7447)80-5(2013 May)
Anger AM,Armache JP,Berninghausen O,Habeck M,Subklewe M,Wilson DN,Beckmann R


book

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Cell149(6)1393-406(2012 Jun)
Castello A,Fischer B,Eichelbaum K,Horos R,Beckmann BM,Strein C,Davey NE,Humphreys DT,Preiss T,Steinmetz LM,Krijgsveld J,Hentze MW


book

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Molecular cell46(5)674-90(2012 Jun)
Baltz AG,Munschauer M,Schwanh?usser B,Vasile A,Murakawa Y,Schueler M,Youngs N,Penfold-Brown D,Drew K,Milek M,Wyler E,Bonneau R,Selbach M,Dieterich C,Landthaler M


book

Functional dichotomy of ribosomal proteins during the synthesis of mammalian 40S ribosomal subunits.
The Journal of cell biology190(5)853-66(2010 Sep)
O'Donohue MF,Choesmel V,Faubladier M,Fichant G,Gleizes PE