Gene Symbol
Nkx2-1
Entrez Gene ID
25628
Full Name
NK2 homeobox 1
Synonyms
TTF1,Titf1
General protein information
Preferred NamesNK2 homeobox 1
Nameshomeobox protein Nkx-2.1 TTF-1 thyroid nuclear factor 1 thyroid transcription factor 1 TTF-1 NK-2 thyroid-specific transcription factor 1
Gene Type
protein-coding
Organism
Rattus norvegicus(Norway rat)
Genome
Chromosome: 6
Map Location: 6q23
Summary
transcription factor that binds and activates the promoter of thyroid specific genes such as thyroglobulin, thyroperoxidase, and thyrotropin receptor; may play a role in organogenesis and/or reproductive maturation and development [RGD, Feb 2006].
Rattus norvegicus (Norway rat)
Nkx2-1
NP_037225.1
Danio rerio (zebrafish)
nkx2.1b
NP_571851.1
Xenopus tropicalis (tropical clawed frog)
nkx2-1
XP_002935383.1
Homo sapiens (human)
NKX2-1
NP_001073136.1
Pan troglodytes (chimpanzee)
NKX2-1
XP_509911.2
NKX2-1
XP_001089773.1
Bos taurus (cattle)
LOC613713
NP_001178387.1
Mus musculus (house mouse)
Nkx2-1
NP_001139670.1
Gallus gallus (chicken)
NKX2-1
NP_989947.1
Related articles in PubMed
Adipogenic Differentiation of Thyroid Cancer Cells Through the Pax8-PPAR? Fusion Protein Is Regulated by Thyroid Transcription Factor 1 (TTF-1).
Xu B, O'Donnell M, O'Donnell J, Yu J, Zhang Y, Sartor MA, Koenig RJ The Journal of biological chemistry291(37)19274-86(2016 09)
Benign hereditary chorea, not only chorea: a family case presentation.
Koht J, L?stegaard SO, Wedding I, Vidailhet M, Louha M, Tallaksen CM Cerebellum & ataxias33(2016)
Gene expression, function, and diversity of Nkx2-4 in the rainbow trout, Oncorhynchus mykiss.
Uemae Y, Sakamoto J, Hidaka Y, Hiratsuka A, Susa T, Kato Y, Suzuki M General and comparative endocrinology206193-202(2014 Sep)
Molecular cloning and functional characterization of two forms of Pax8 in the rainbow trout, Oncorhynchus mykiss.
Katagiri N, Uemae Y, Sakamoto J, Hidaka Y, Susa T, Kato Y, Kimura S, Suzuki M General and comparative endocrinology19822-31(2014 Mar)
NKX2-1 mutation in a family diagnosed with ataxic dyskinetic cerebral palsy.
McMichael G, Haan E, Gardner A, Yap TY, Thompson S, Ouvrier R, Dale RC, Gecz J, Maclennan AH European journal of medical genetics56(9)506-9(2013 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Nkx2-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Nkx2-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
ORa12246
Clone ID Related Accession (Same CDS sequence)
XM_006240118.2
, NM_013093.1
Accession Version
NM_013093.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1119bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2019-07-04
Organism
Rattus norvegicus(Norway rat)
Product
homeobox protein Nkx-2.1
Comment
Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07064373.1. On or before Nov 23, 2008 this sequence version replaced XM_216720.4, XM_001079296.1.
Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AB894119.1, X53858.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMEA2689599, SAMN01906348 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 ATGTCGATGA GTCCAAAGCA CACGACTCCG TTCTCAGTGT CTGACATCTT GAGTCCCCTG GAGGAAAGCT ACAAGAAAGT GGGCATGGAG GGCGGCGGCC TCGGGGCTCC GCTCGCAGCT TACAGACAGG GCCAGGCGGC CCCGCCGGCC GCGGCCATGC AGCAGCACGC CGTGGGGCAC CACGGCGCCG TCACCGCCGC CTACCACATG ACGGCGGCGG GGGTGCCCCA GCTCTCCCAC TCCGCCGTGG GGGGCTACTG CAACGGCAAC CTGGGCAACG TGAGCGAGCT GCCACCTTAC CAGGACACCA TGCGGAACAG CGCTTCGGGC CCCGGATGGT ACGGCGCCAA CCCAGATCCG CGCTTCCCCG CCATCTCCCG CTTCATGGGC CCGGCGAGCG GCATGAATAT GAGCGGCATG GGCGGCCTGG GCTCGCTGGG GGACGTGAGC AAGAACATGG CCCCGCTGCC CAGCGCACCC CGCCGGAAGC GTCGGGTGCT CTTCTCCCAG GCGCAGGTGT ACGAGCTCGA GCGACGCTTC AAGCAGCAGA AGTACCTGTC GGCGCCGGAG CGCGAGCATC TGGCCAGCAT GATTCACCTG ACACCCACGC AGGTCAAGAT CTGGTTCCAG AACCACCGCT ACAAGATGAA GCGCCAGGCG AAGGACAAGG CGGCGCAGCA GCAACTGCAG CAGGACAGCG GCGGCGGCGG AGGCGGCGGC GGCGGCGCGG GTTGCCCGCA GCAGCAGCAA GCTCAGCAGC AGTCGCCGCG CCGGGTGGCC GTGCCGGTCC TGGTGAAAGA CGGCAAACCC TGCCAAGCGG GCGCCCCTGC ACCGGGAGCC GCCAGCCTGC AAGGCCACGC GCAACAACAA GCTCAGCAGC AGGCGCAGGC GGCACAAGCG GCTGCCGCGG CCATCTCTGT GGGCAGCGGT GGTGCGGGTC TAGGAGCACA CCCAGGCCAC CAGCCCGGCA GCGCAGGGCA GTCCCCGGAC CTGGCGCACC ACGCAGCCAG CCCCGCAGCG CTGCAGGGCC AGGTCTCTAG CCTATCTCAT CTGAACTCCT CTGGCTCGGA CTATGGCGCC ATGTCTTGCT CTACTTTGCT TTATGGTCGG ACCTGGTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_037225.1
CDS 1..1119
Translation
Target ORF information:
RefSeq Version NM_013093.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus NK2 homeobox 1 (Nkx2-1), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_013093.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 ATGTCGATGA GTCCAAAGCA CACGACTCCG TTCTCAGTGT CTGACATCTT GAGTCCCCTG GAGGAAAGCT ACAAGAAAGT GGGCATGGAG GGCGGCGGCC TCGGGGCTCC GCTCGCAGCT TACAGACAGG GCCAGGCGGC CCCGCCGGCC GCGGCCATGC AGCAGCACGC CGTGGGGCAC CACGGCGCCG TCACCGCCGC CTACCACATG ACGGCGGCGG GGGTGCCCCA GCTCTCCCAC TCCGCCGTGG GGGGCTACTG CAACGGCAAC CTGGGCAACG TGAGCGAGCT GCCACCTTAC CAGGACACCA TGCGGAACAG CGCTTCGGGC CCCGGATGGT ACGGCGCCAA CCCAGATCCG CGCTTCCCCG CCATCTCCCG CTTCATGGGC CCGGCGAGCG GCATGAATAT GAGCGGCATG GGCGGCCTGG GCTCGCTGGG GGACGTGAGC AAGAACATGG CCCCGCTGCC CAGCGCACCC CGCCGGAAGC GTCGGGTGCT CTTCTCCCAG GCGCAGGTGT ACGAGCTCGA GCGACGCTTC AAGCAGCAGA AGTACCTGTC GGCGCCGGAG CGCGAGCATC TGGCCAGCAT GATTCACCTG ACACCCACGC AGGTCAAGAT CTGGTTCCAG AACCACCGCT ACAAGATGAA GCGCCAGGCG AAGGACAAGG CGGCGCAGCA GCAACTGCAG CAGGACAGCG GCGGCGGCGG AGGCGGCGGC GGCGGCGCGG GTTGCCCGCA GCAGCAGCAA GCTCAGCAGC AGTCGCCGCG CCGGGTGGCC GTGCCGGTCC TGGTGAAAGA CGGCAAACCC TGCCAAGCGG GCGCCCCTGC ACCGGGAGCC GCCAGCCTGC AAGGCCACGC GCAACAACAA GCTCAGCAGC AGGCGCAGGC GGCACAAGCG GCTGCCGCGG CCATCTCTGT GGGCAGCGGT GGTGCGGGTC TAGGAGCACA CCCAGGCCAC CAGCCCGGCA GCGCAGGGCA GTCCCCGGAC CTGGCGCACC ACGCAGCCAG CCCCGCAGCG CTGCAGGGCC AGGTCTCTAG CCTATCTCAT CTGAACTCCT CTGGCTCGGA CTATGGCGCC ATGTCTTGCT CTACTTTGCT TTATGGTCGG ACCTGGTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa12246
Clone ID Related Accession (Same CDS sequence)
XM_006240118.2
, NM_013093.1
Accession Version
XM_006240118.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1119bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
homeobox protein Nkx-2.1 isoform X3
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005105.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Aug 7, 2014 this sequence version replaced XM_006240118.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 ATGTCGATGA GTCCAAAGCA CACGACTCCG TTCTCAGTGT CTGACATCTT GAGTCCCCTG GAGGAAAGCT ACAAGAAAGT GGGCATGGAG GGCGGCGGCC TCGGGGCTCC GCTCGCAGCT TACAGACAGG GCCAGGCGGC CCCGCCGGCC GCGGCCATGC AGCAGCACGC CGTGGGGCAC CACGGCGCCG TCACCGCCGC CTACCACATG ACGGCGGCGG GGGTGCCCCA GCTCTCCCAC TCCGCCGTGG GGGGCTACTG CAACGGCAAC CTGGGCAACG TGAGCGAGCT GCCACCTTAC CAGGACACCA TGCGGAACAG CGCTTCGGGC CCCGGATGGT ACGGCGCCAA CCCAGATCCG CGCTTCCCCG CCATCTCCCG CTTCATGGGC CCGGCGAGCG GCATGAATAT GAGCGGCATG GGCGGCCTGG GCTCGCTGGG GGACGTGAGC AAGAACATGG CCCCGCTGCC CAGCGCACCC CGCCGGAAGC GTCGGGTGCT CTTCTCCCAG GCGCAGGTGT ACGAGCTCGA GCGACGCTTC AAGCAGCAGA AGTACCTGTC GGCGCCGGAG CGCGAGCATC TGGCCAGCAT GATTCACCTG ACACCCACGC AGGTCAAGAT CTGGTTCCAG AACCACCGCT ACAAGATGAA GCGCCAGGCG AAGGACAAGG CGGCGCAGCA GCAACTGCAG CAGGACAGCG GCGGCGGCGG AGGCGGCGGC GGCGGCGCGG GTTGCCCGCA GCAGCAGCAA GCTCAGCAGC AGTCGCCGCG CCGGGTGGCC GTGCCGGTCC TGGTGAAAGA CGGCAAACCC TGCCAAGCGG GCGCCCCTGC ACCGGGAGCC GCCAGCCTGC AAGGCCACGC GCAACAACAA GCTCAGCAGC AGGCGCAGGC GGCACAAGCG GCTGCCGCGG CCATCTCTGT GGGCAGCGGT GGTGCGGGTC TAGGAGCACA CCCAGGCCAC CAGCCCGGCA GCGCAGGGCA GTCCCCGGAC CTGGCGCACC ACGCAGCCAG CCCCGCAGCG CTGCAGGGCC AGGTCTCTAG CCTATCTCAT CTGAACTCCT CTGGCTCGGA CTATGGCGCC ATGTCTTGCT CTACTTTGCT TTATGGTCGG ACCTGGTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006240180.1
CDS 866..1984
Translation
Target ORF information:
RefSeq Version XM_006240118.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus NK2 homeobox 1 (Nkx2-1), transcript variant X3, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006240118.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 ATGTCGATGA GTCCAAAGCA CACGACTCCG TTCTCAGTGT CTGACATCTT GAGTCCCCTG GAGGAAAGCT ACAAGAAAGT GGGCATGGAG GGCGGCGGCC TCGGGGCTCC GCTCGCAGCT TACAGACAGG GCCAGGCGGC CCCGCCGGCC GCGGCCATGC AGCAGCACGC CGTGGGGCAC CACGGCGCCG TCACCGCCGC CTACCACATG ACGGCGGCGG GGGTGCCCCA GCTCTCCCAC TCCGCCGTGG GGGGCTACTG CAACGGCAAC CTGGGCAACG TGAGCGAGCT GCCACCTTAC CAGGACACCA TGCGGAACAG CGCTTCGGGC CCCGGATGGT ACGGCGCCAA CCCAGATCCG CGCTTCCCCG CCATCTCCCG CTTCATGGGC CCGGCGAGCG GCATGAATAT GAGCGGCATG GGCGGCCTGG GCTCGCTGGG GGACGTGAGC AAGAACATGG CCCCGCTGCC CAGCGCACCC CGCCGGAAGC GTCGGGTGCT CTTCTCCCAG GCGCAGGTGT ACGAGCTCGA GCGACGCTTC AAGCAGCAGA AGTACCTGTC GGCGCCGGAG CGCGAGCATC TGGCCAGCAT GATTCACCTG ACACCCACGC AGGTCAAGAT CTGGTTCCAG AACCACCGCT ACAAGATGAA GCGCCAGGCG AAGGACAAGG CGGCGCAGCA GCAACTGCAG CAGGACAGCG GCGGCGGCGG AGGCGGCGGC GGCGGCGCGG GTTGCCCGCA GCAGCAGCAA GCTCAGCAGC AGTCGCCGCG CCGGGTGGCC GTGCCGGTCC TGGTGAAAGA CGGCAAACCC TGCCAAGCGG GCGCCCCTGC ACCGGGAGCC GCCAGCCTGC AAGGCCACGC GCAACAACAA GCTCAGCAGC AGGCGCAGGC GGCACAAGCG GCTGCCGCGG CCATCTCTGT GGGCAGCGGT GGTGCGGGTC TAGGAGCACA CCCAGGCCAC CAGCCCGGCA GCGCAGGGCA GTCCCCGGAC CTGGCGCACC ACGCAGCCAG CCCCGCAGCG CTGCAGGGCC AGGTCTCTAG CCTATCTCAT CTGAACTCCT CTGGCTCGGA CTATGGCGCC ATGTCTTGCT CTACTTTGCT TTATGGTCGG ACCTGGTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa29353
Clone ID Related Accession (Same CDS sequence)
XM_006240116.2
Accession Version
XM_006240116.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1272bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
homeobox protein Nkx-2.1 isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005105.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Aug 7, 2014 this sequence version replaced XM_006240116.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 ATGCCCCGCC TCTGGTGGCT GCCTAAAACC TGGCGCCGGG CTAAAACAAA CGCGAGGCAG CCCCCGAGCC TCCACTCAAG CCAATTAAGG CGGACTCGGT CCACTCCGTT ACGTGTACAT CCAACAAGAT CGGCGTTAAG CCGACGCCGA ATCATGTCGA TGAGTCCAAA GCACACGACT CCGTTCTCAG TGTCTGACAT CTTGAGTCCC CTGGAGGAAA GCTACAAGAA AGTGGGCATG GAGGGCGGCG GCCTCGGGGC TCCGCTCGCA GCTTACAGAC AGGGCCAGGC GGCCCCGCCG GCCGCGGCCA TGCAGCAGCA CGCCGTGGGG CACCACGGCG CCGTCACCGC CGCCTACCAC ATGACGGCGG CGGGGGTGCC CCAGCTCTCC CACTCCGCCG TGGGGGGCTA CTGCAACGGC AACCTGGGCA ACGTGAGCGA GCTGCCACCT TACCAGGACA CCATGCGGAA CAGCGCTTCG GGCCCCGGAT GGTACGGCGC CAACCCAGAT CCGCGCTTCC CCGCCATCTC CCGCTTCATG GGCCCGGCGA GCGGCATGAA TATGAGCGGC ATGGGCGGCC TGGGCTCGCT GGGGGACGTG AGCAAGAACA TGGCCCCGCT GCCCAGCGCA CCCCGCCGGA AGCGTCGGGT GCTCTTCTCC CAGGCGCAGG TGTACGAGCT CGAGCGACGC TTCAAGCAGC AGAAGTACCT GTCGGCGCCG GAGCGCGAGC ATCTGGCCAG CATGATTCAC CTGACACCCA CGCAGGTCAA GATCTGGTTC CAGAACCACC GCTACAAGAT GAAGCGCCAG GCGAAGGACA AGGCGGCGCA GCAGCAACTG CAGCAGGACA GCGGCGGCGG CGGAGGCGGC GGCGGCGGCG CGGGTTGCCC GCAGCAGCAG CAAGCTCAGC AGCAGTCGCC GCGCCGGGTG GCCGTGCCGG TCCTGGTGAA AGACGGCAAA CCCTGCCAAG CGGGCGCCCC TGCACCGGGA GCCGCCAGCC TGCAAGGCCA CGCGCAACAA CAAGCTCAGC AGCAGGCGCA GGCGGCACAA GCGGCTGCCG CGGCCATCTC TGTGGGCAGC GGTGGTGCGG GTCTAGGAGC ACACCCAGGC CACCAGCCCG GCAGCGCAGG GCAGTCCCCG GACCTGGCGC ACCACGCAGC CAGCCCCGCA GCGCTGCAGG GCCAGGTCTC TAGCCTATCT CATCTGAACT CCTCTGGCTC GGACTATGGC GCCATGTCTT GCTCTACTTT GCTTTATGGT CGGACCTGGT GA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006240178.1
CDS 129..1400
Translation
Target ORF information:
RefSeq Version XM_006240116.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus NK2 homeobox 1 (Nkx2-1), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006240116.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 ATGCCCCGCC TCTGGTGGCT GCCTAAAACC TGGCGCCGGG CTAAAACAAA CGCGAGGCAG CCCCCGAGCC TCCACTCAAG CCAATTAAGG CGGACTCGGT CCACTCCGTT ACGTGTACAT CCAACAAGAT CGGCGTTAAG CCGACGCCGA ATCATGTCGA TGAGTCCAAA GCACACGACT CCGTTCTCAG TGTCTGACAT CTTGAGTCCC CTGGAGGAAA GCTACAAGAA AGTGGGCATG GAGGGCGGCG GCCTCGGGGC TCCGCTCGCA GCTTACAGAC AGGGCCAGGC GGCCCCGCCG GCCGCGGCCA TGCAGCAGCA CGCCGTGGGG CACCACGGCG CCGTCACCGC CGCCTACCAC ATGACGGCGG CGGGGGTGCC CCAGCTCTCC CACTCCGCCG TGGGGGGCTA CTGCAACGGC AACCTGGGCA ACGTGAGCGA GCTGCCACCT TACCAGGACA CCATGCGGAA CAGCGCTTCG GGCCCCGGAT GGTACGGCGC CAACCCAGAT CCGCGCTTCC CCGCCATCTC CCGCTTCATG GGCCCGGCGA GCGGCATGAA TATGAGCGGC ATGGGCGGCC TGGGCTCGCT GGGGGACGTG AGCAAGAACA TGGCCCCGCT GCCCAGCGCA CCCCGCCGGA AGCGTCGGGT GCTCTTCTCC CAGGCGCAGG TGTACGAGCT CGAGCGACGC TTCAAGCAGC AGAAGTACCT GTCGGCGCCG GAGCGCGAGC ATCTGGCCAG CATGATTCAC CTGACACCCA CGCAGGTCAA GATCTGGTTC CAGAACCACC GCTACAAGAT GAAGCGCCAG GCGAAGGACA AGGCGGCGCA GCAGCAACTG CAGCAGGACA GCGGCGGCGG CGGAGGCGGC GGCGGCGGCG CGGGTTGCCC GCAGCAGCAG CAAGCTCAGC AGCAGTCGCC GCGCCGGGTG GCCGTGCCGG TCCTGGTGAA AGACGGCAAA CCCTGCCAAG CGGGCGCCCC TGCACCGGGA GCCGCCAGCC TGCAAGGCCA CGCGCAACAA CAAGCTCAGC AGCAGGCGCA GGCGGCACAA GCGGCTGCCG CGGCCATCTC TGTGGGCAGC GGTGGTGCGG GTCTAGGAGC ACACCCAGGC CACCAGCCCG GCAGCGCAGG GCAGTCCCCG GACCTGGCGC ACCACGCAGC CAGCCCCGCA GCGCTGCAGG GCCAGGTCTC TAGCCTATCT CATCTGAACT CCTCTGGCTC GGACTATGGC GCCATGTCTT GCTCTACTTT GCTTTATGGT CGGACCTGGT GA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa29354
Clone ID Related Accession (Same CDS sequence)
XM_006240117.3
Accession Version
XM_006240117.3 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 1209bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
homeobox protein Nkx-2.1 isoform X2
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005105.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jul 26, 2016 this sequence version replaced XM_006240117.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 ATGTGGTCCG GAGGCGGTGG GAAGGCGCGG GGCTGGGAGG CCGCAGCGGG AGGGAGGAGC AGCCCCGGCA GGCTCAGCCG ACGCCGAATC ATGTCGATGA GTCCAAAGCA CACGACTCCG TTCTCAGTGT CTGACATCTT GAGTCCCCTG GAGGAAAGCT ACAAGAAAGT GGGCATGGAG GGCGGCGGCC TCGGGGCTCC GCTCGCAGCT TACAGACAGG GCCAGGCGGC CCCGCCGGCC GCGGCCATGC AGCAGCACGC CGTGGGGCAC CACGGCGCCG TCACCGCCGC CTACCACATG ACGGCGGCGG GGGTGCCCCA GCTCTCCCAC TCCGCCGTGG GGGGCTACTG CAACGGCAAC CTGGGCAACG TGAGCGAGCT GCCACCTTAC CAGGACACCA TGCGGAACAG CGCTTCGGGC CCCGGATGGT ACGGCGCCAA CCCAGATCCG CGCTTCCCCG CCATCTCCCG CTTCATGGGC CCGGCGAGCG GCATGAATAT GAGCGGCATG GGCGGCCTGG GCTCGCTGGG GGACGTGAGC AAGAACATGG CCCCGCTGCC CAGCGCACCC CGCCGGAAGC GTCGGGTGCT CTTCTCCCAG GCGCAGGTGT ACGAGCTCGA GCGACGCTTC AAGCAGCAGA AGTACCTGTC GGCGCCGGAG CGCGAGCATC TGGCCAGCAT GATTCACCTG ACACCCACGC AGGTCAAGAT CTGGTTCCAG AACCACCGCT ACAAGATGAA GCGCCAGGCG AAGGACAAGG CGGCGCAGCA GCAACTGCAG CAGGACAGCG GCGGCGGCGG AGGCGGCGGC GGCGGCGCGG GTTGCCCGCA GCAGCAGCAA GCTCAGCAGC AGTCGCCGCG CCGGGTGGCC GTGCCGGTCC TGGTGAAAGA CGGCAAACCC TGCCAAGCGG GCGCCCCTGC ACCGGGAGCC GCCAGCCTGC AAGGCCACGC GCAACAACAA GCTCAGCAGC AGGCGCAGGC GGCACAAGCG GCTGCCGCGG CCATCTCTGT GGGCAGCGGT GGTGCGGGTC TAGGAGCACA CCCAGGCCAC CAGCCCGGCA GCGCAGGGCA GTCCCCGGAC CTGGCGCACC ACGCAGCCAG CCCCGCAGCG CTGCAGGGCC AGGTCTCTAG CCTATCTCAT CTGAACTCCT CTGGCTCGGA CTATGGCGCC ATGTCTTGCT CTACTTTGCT TTATGGTCGG ACCTGGTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006240179.1
CDS 272..1480
Translation
Target ORF information:
RefSeq Version XM_006240117.3
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus NK2 homeobox 1 (Nkx2-1), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006240117.3
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 ATGTGGTCCG GAGGCGGTGG GAAGGCGCGG GGCTGGGAGG CCGCAGCGGG AGGGAGGAGC AGCCCCGGCA GGCTCAGCCG ACGCCGAATC ATGTCGATGA GTCCAAAGCA CACGACTCCG TTCTCAGTGT CTGACATCTT GAGTCCCCTG GAGGAAAGCT ACAAGAAAGT GGGCATGGAG GGCGGCGGCC TCGGGGCTCC GCTCGCAGCT TACAGACAGG GCCAGGCGGC CCCGCCGGCC GCGGCCATGC AGCAGCACGC CGTGGGGCAC CACGGCGCCG TCACCGCCGC CTACCACATG ACGGCGGCGG GGGTGCCCCA GCTCTCCCAC TCCGCCGTGG GGGGCTACTG CAACGGCAAC CTGGGCAACG TGAGCGAGCT GCCACCTTAC CAGGACACCA TGCGGAACAG CGCTTCGGGC CCCGGATGGT ACGGCGCCAA CCCAGATCCG CGCTTCCCCG CCATCTCCCG CTTCATGGGC CCGGCGAGCG GCATGAATAT GAGCGGCATG GGCGGCCTGG GCTCGCTGGG GGACGTGAGC AAGAACATGG CCCCGCTGCC CAGCGCACCC CGCCGGAAGC GTCGGGTGCT CTTCTCCCAG GCGCAGGTGT ACGAGCTCGA GCGACGCTTC AAGCAGCAGA AGTACCTGTC GGCGCCGGAG CGCGAGCATC TGGCCAGCAT GATTCACCTG ACACCCACGC AGGTCAAGAT CTGGTTCCAG AACCACCGCT ACAAGATGAA GCGCCAGGCG AAGGACAAGG CGGCGCAGCA GCAACTGCAG CAGGACAGCG GCGGCGGCGG AGGCGGCGGC GGCGGCGCGG GTTGCCCGCA GCAGCAGCAA GCTCAGCAGC AGTCGCCGCG CCGGGTGGCC GTGCCGGTCC TGGTGAAAGA CGGCAAACCC TGCCAAGCGG GCGCCCCTGC ACCGGGAGCC GCCAGCCTGC AAGGCCACGC GCAACAACAA GCTCAGCAGC AGGCGCAGGC GGCACAAGCG GCTGCCGCGG CCATCTCTGT GGGCAGCGGT GGTGCGGGTC TAGGAGCACA CCCAGGCCAC CAGCCCGGCA GCGCAGGGCA GTCCCCGGAC CTGGCGCACC ACGCAGCCAG CCCCGCAGCG CTGCAGGGCC AGGTCTCTAG CCTATCTCAT CTGAACTCCT CTGGCTCGGA CTATGGCGCC ATGTCTTGCT CTACTTTGCT TTATGGTCGG ACCTGGTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.