Gene Symbol | Cldn6 |
Entrez Gene ID | 287098 |
Full Name | claudin 6 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Cldn6 cDNA ORF clone
Gene Symbol | Cldn6 |
Entrez Gene ID | 287098 |
Full Name | claudin 6 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001102364.1 | NP_001095834.1 | claudin-6 precursor |
XM_008767511.2 | XP_008765733.1 | claudin-6 isoform X1 |
Pan troglodytes (chimpanzee) | CLDN6 | XP_523276.1 |
CLDN6 | XP_001088715.1 | |
Mus musculus (house mouse) | Cldn6 | NP_061247.1 |
Xenopus tropicalis (tropical clawed frog) | cldn6.1 | NP_988873.1 |
Rattus norvegicus (Norway rat) | Cldn6 | NP_001095834.1 |
Bos taurus (cattle) | CLDN6 | NP_001192626.1 |
Homo sapiens (human) | CLDN6 | NP_067018.2 |
Canis lupus familiaris (dog) | CLDN6 | XP_547168.2 |
Danio rerio (zebrafish) | cldne | NP_571840.1 |
Danio rerio (zebrafish) | cldnd | NP_851295.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100493413 | XP_002941739.1 |
Claudin association with CD81 defines hepatitis C virus entry.
Harris HJ, Davis C, Mullins JG, Hu K, Goodall M, Farquhar MJ, Mee CJ, McCaffrey K, Young S, Drummer H, Balfe P, McKeating JA
The Journal of biological chemistry285(27)21092-102(2010 Jul)
Structure and function of claudins.
Krause G, Winkler L, Mueller SL, Haseloff RF, Piontek J, Blasig IE
Biochimica et biophysica acta1778(3)631-45(2008 Mar)
Distinct subdomain organization and molecular composition of a tight junction with adherens junction features.
Nunes FD, Lopez LN, Lin HW, Davies C, Azevedo RB, Gow A, Kachar B
Journal of cell science119(Pt 23)4819-27(2006 Dec)
Molecular architecture of tight junctions of periderm differs from that of the maculae occludentes of epidermis.
Morita K, Furuse M, Yoshida Y, Itoh M, Sasaki H, Tsukita S, Miyachi Y
The Journal of investigative dermatology118(6)1073-9(2002 Jun)
Claudin multigene family encoding four-transmembrane domain protein components of tight junction strands.
Morita K, Furuse M, Fujimoto K, Tsukita S
Proceedings of the National Academy of Sciences of the United States of America96(2)511-6(1999 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Cldn6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Cldn6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa11365 | |
Clone ID Related Accession (Same CDS sequence) | NM_001102364.1 , XM_008767511.2 | |
Accession Version | NM_001102364.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 660bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | claudin-6 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473948.1. On or before Aug 24, 2007 this sequence version replaced XM_220202.3, XM_001055688.1. ##Evidence-Data-START## Transcript exon combination :: BC168250.1, BU671697.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052297, SAMEA2689597 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCCTCTA CTGGTCTGCA AATCTTGGGG ATTGTCCTGA CCCTGCTTGG CTGGGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001095834.1 |
CDS | 132..791 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001102364.1 |
1 | ATGGCCTCTA CTGGTCTGCA AATCTTGGGG ATTGTCCTGA CCCTGCTTGG CTGGGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa11365 | |
Clone ID Related Accession (Same CDS sequence) | NM_001102364.1 , XM_008767511.2 | |
Accession Version | XM_008767511.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 660bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | claudin-6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008767511.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCTCTA CTGGTCTGCA AATCTTGGGG ATTGTCCTGA CCCTGCTTGG CTGGGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008765733.1 |
CDS | 445..1104 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008767511.2 |
1 | ATGGCCTCTA CTGGTCTGCA AATCTTGGGG ATTGTCCTGA CCCTGCTTGG CTGGGTCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Claudin association with CD81 defines hepatitis C virus entry. |
Structure and function of claudins. |
Distinct subdomain organization and molecular composition of a tight junction with adherens junction features. |
Molecular architecture of tight junctions of periderm differs from that of the maculae occludentes of epidermis. |
Claudin multigene family encoding four-transmembrane domain protein components of tight junction strands. |