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Hoxb9 cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Hoxb9
Entrez Gene ID 287647
Full Name homeo box B9
General protein information
Preferred Names

homeo box B9

Names

homeobox protein Hox-B9
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

10

10q26

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_017597132.1 XP_017452621.1 homeobox protein Hox-B9 isoform X1
NM_001100497.1 NP_001093967.1 homeobox protein Hox-B9

Pathways from BioSystems


Homologies


Gallus gallus (chicken) HOXB9 XP_001233691.2
Mus musculus (house mouse) Hoxb9 NP_032296.2
Xenopus tropicalis (tropical clawed frog) hoxb9 NP_988879.1
Pan troglodytes (chimpanzee) HOXB9 XP_001172956.1
Bos taurus (cattle) HOXB9 NP_001178115.1
Rattus norvegicus (Norway rat) Hoxb9 NP_001093967.1
Homo sapiens (human) HOXB9 NP_076922.1
Canis lupus familiaris (dog) HOXB9 XP_864745.2
Danio rerio (zebrafish) hoxb9a NP_571196.1

Gene Ontology


Bibliography

Related articles in PubMed

WNT/TCF signaling through LEF1 and HOXB9 mediates lung adenocarcinoma metastasis.
Nguyen DX, Chiang AC, Zhang XH, Kim JY, Kris MG, Ladanyi M, Gerald WL, Massagu? J
Cell138(1)51-62(2009 Jul)

Rostral hindbrain patterning involves the direct activation of a Krox20 transcriptional enhancer by Hox/Pbx and Meis factors.
Wassef MA, Chomette D, Pouilhe M, Stedman A, Havis E, Desmarquet-Trin Dinh C, Schneider-Maunoury S, Gilardi-Hebenstreit P, Charnay P, Ghislain J
Development (Cambridge, England)135(20)3369-78(2008 Oct)

Hox patterning of the vertebrate rib cage.
McIntyre DC, Rakshit S, Yallowitz AR, Loken L, Jeannotte L, Capecchi MR, Wellik DM
Development (Cambridge, England)134(16)2981-9(2007 Aug)

A large targeted deletion of Hoxb1-Hoxb9 produces a series of single-segment anterior homeotic transformations.
Medina-Mart?nez O, Bradley A, Ram?rez-Solis R
Developmental biology222(1)71-83(2000 Jun)

Paralogous mouse Hox genes, Hoxa9, Hoxb9, and Hoxd9, function together to control development of the mammary gland in response to pregnancy.
Chen F, Capecchi MR
Proceedings of the National Academy of Sciences of the United States of America96(2)541-6(1999 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Hoxb9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Hoxb9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa11498 NM_001100497.1
Latest version!		 Rattus norvegicus homeo box B9 (Hoxb9), mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $139.30
$199.00
ORa57248 XM_017597132.1
Latest version!		 Rattus norvegicus homeo box B9 (Hoxb9), transcript variant X1, mRNA. pcDNA3.1+/C-(K)DYK or customized vector TBD $139.30
$199.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa11498
Clone ID Related Accession (Same CDS sequence) NM_001100497.1
Accession Version NM_001100497.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 753bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-10-02
Organism Rattus norvegicus(Norway rat)
Product homeobox protein Hox-B9
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AABR07030395.1. On Aug 5, 2007 this sequence version replaced XM_220887.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: CK481201.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMEA2689597 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCCATTT CTGGGACGCT TAGCAGCTAT TATGTCGACT CGATCATAAG TCACGAGAGC 
GAGGACGCGC CTCCAGCCAA GTTTCCTTCG GGCCAGTACG CGAACCCGCG GCAGCCGGGC 
CACGCCGAGC ACCTGGACTT CCCCTCGTGC AGCTTCCAGC CCAAAGCTCC GGTGTTCGGC 
GCCTCCTGGG CGCCGCTGAG CCCGCACGCT TCGGGGAGCC TGCCGTCGGT CTACCACCCC 
TACCTGCAGC CCCAGGGCGC GCCGGCGGCC GAGAGCAGGT ACCTCCGTAC CTGGCTAGAG 
CCGGCTCCCC GCGCCGAGGC CGCCCCGGGG CAGGGCCAGG CGGCCGTGAA GGCGGAGCCG 
CTGCTGGGCG CGCCCGGGGA GCTGCTTAAA CAGGGCACGC CCGAGTACAG TTTGGAAACT 
TCGGCGGGCA GGGAGGCTGT CCTGTCTAAT CAAAGAGCCG GCTACGGGGA CAATAAAATT 
TGCGAAGGAA GCGAGGACAA AGAGAGGCCG GATCAAACCA ACCCCTCTGC CAACTGGCTG 
CACGCCCGCT CTTCCCGGAA AAAGCGCTGT CCCTACACCA AATACCAGAC GCTGGAGCTA 
GAGAAGGAGT TTCTATTCAA TATGTACCTC ACCAGGGACC GCAGGCACGA AGTGGCCAGA 
CTCCTCAATC TGAGTGAGAG ACAAGTCAAA ATCTGGTTTC AGAACCGGCG GATGAAAATG 
AAGAAGATGA ATAAGGAGCA GGGCAAAGAG TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001093967.1
CDS1..753
Translation

Target ORF information:

RefSeq Version NM_001100497.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus homeo box B9 (Hoxb9), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001100497.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
ATGTCCATTT CTGGGACGCT TAGCAGCTAT TATGTCGACT CGATCATAAG TCACGAGAGC 
GAGGACGCGC CTCCAGCCAA GTTTCCTTCG GGCCAGTACG CGAACCCGCG GCAGCCGGGC 
CACGCCGAGC ACCTGGACTT CCCCTCGTGC AGCTTCCAGC CCAAAGCTCC GGTGTTCGGC 
GCCTCCTGGG CGCCGCTGAG CCCGCACGCT TCGGGGAGCC TGCCGTCGGT CTACCACCCC 
TACCTGCAGC CCCAGGGCGC GCCGGCGGCC GAGAGCAGGT ACCTCCGTAC CTGGCTAGAG 
CCGGCTCCCC GCGCCGAGGC CGCCCCGGGG CAGGGCCAGG CGGCCGTGAA GGCGGAGCCG 
CTGCTGGGCG CGCCCGGGGA GCTGCTTAAA CAGGGCACGC CCGAGTACAG TTTGGAAACT 
TCGGCGGGCA GGGAGGCTGT CCTGTCTAAT CAAAGAGCCG GCTACGGGGA CAATAAAATT 
TGCGAAGGAA GCGAGGACAA AGAGAGGCCG GATCAAACCA ACCCCTCTGC CAACTGGCTG 
CACGCCCGCT CTTCCCGGAA AAAGCGCTGT CCCTACACCA AATACCAGAC GCTGGAGCTA 
GAGAAGGAGT TTCTATTCAA TATGTACCTC ACCAGGGACC GCAGGCACGA AGTGGCCAGA 
CTCCTCAATC TGAGTGAGAG ACAAGTCAAA ATCTGGTTTC AGAACCGGCG GATGAAAATG 
AAGAAGATGA ATAAGGAGCA GGGCAAAGAG TAA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa57248
Clone ID Related Accession (Same CDS sequence) XM_017597132.1
Accession Version XM_017597132.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 813bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product homeobox protein Hox-B9 isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
ATGTCCATTT CTGGGACGCT TAGCAGCTAT TATGTCGACT CGATCATAAG TCACGAGAGC 
GAGGACGCGC CTCCAGCCAA GTTTCCTTCG GGCCAGTACG CGAACCCGCG GCAGCCGGGC 
CACGCCGAGC ACCTGGACTT CCCCTCGTGC AGCTTCCAGC CCAAAGCTCC GGTGTTCGGC 
GCCTCCTGGG CGCCGCTGAG CCCGCACGCT TCGGGGAGCC TGCCGTCGGT CTACCACCCC 
TACCTGCAGC CCCAGGGCGC GCCGGCGGCC GAGAGCAGGT ACCTCCGTAC CTGGCTAGAG 
CCGGCTCCCC GCGCCGAGGC CGCCCCGGGG CAGGGCCAGG CGGCCGTGAA GGCGGAGCCG 
CTGCTGGGCG CGCCCGGGGA GCTGCTTAAA CAGGGCACGC CCGAGTACAG TTTGGAAACT 
TCGGCGGGCA GGGAGGCTGT CCTGTCTAAT CAAAGAGCCG GCTACGGGGA CAATAAAATT 
TGCGAAGGAA GCGAGGACAA AGAGAGGCCG GATCAAAGAA GAAGAGAACC CTTTGACATC 
CAGCCAGAGG GCCAAAGGAA GACTCCCCCA AAGCTCAGAG TGGGGACTTC ACCTCCACCT 
CCTGCAAAGT ACACTGCTGG GTCCGTCCTG CTGCTGATGC ATGGGTCCAC TTCTGCCAAA 
CAGGCCAGTG TGCGAAGGAA AGAGGCAAAC ATCCAGCCTT CCCATCGGGC AGAGAGGCAA 
ATCCTCTGCT TCTCCGGCTC TCCCTGCTTC TCAATCCCTT CCACCCGTGG ACTTTTGTTC 
CCGCTTGTGG ACTTTTGTTC CCGCTTCTCC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_017452621.1
CDS113..925
Translation

Target ORF information:

RefSeq Version XM_017597132.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus homeo box B9 (Hoxb9), transcript variant X1, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_017597132.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
ATGTCCATTT CTGGGACGCT TAGCAGCTAT TATGTCGACT CGATCATAAG TCACGAGAGC 
GAGGACGCGC CTCCAGCCAA GTTTCCTTCG GGCCAGTACG CGAACCCGCG GCAGCCGGGC 
CACGCCGAGC ACCTGGACTT CCCCTCGTGC AGCTTCCAGC CCAAAGCTCC GGTGTTCGGC 
GCCTCCTGGG CGCCGCTGAG CCCGCACGCT TCGGGGAGCC TGCCGTCGGT CTACCACCCC 
TACCTGCAGC CCCAGGGCGC GCCGGCGGCC GAGAGCAGGT ACCTCCGTAC CTGGCTAGAG 
CCGGCTCCCC GCGCCGAGGC CGCCCCGGGG CAGGGCCAGG CGGCCGTGAA GGCGGAGCCG 
CTGCTGGGCG CGCCCGGGGA GCTGCTTAAA CAGGGCACGC CCGAGTACAG TTTGGAAACT 
TCGGCGGGCA GGGAGGCTGT CCTGTCTAAT CAAAGAGCCG GCTACGGGGA CAATAAAATT 
TGCGAAGGAA GCGAGGACAA AGAGAGGCCG GATCAAAGAA GAAGAGAACC CTTTGACATC 
CAGCCAGAGG GCCAAAGGAA GACTCCCCCA AAGCTCAGAG TGGGGACTTC ACCTCCACCT 
CCTGCAAAGT ACACTGCTGG GTCCGTCCTG CTGCTGATGC ATGGGTCCAC TTCTGCCAAA 
CAGGCCAGTG TGCGAAGGAA AGAGGCAAAC ATCCAGCCTT CCCATCGGGC AGAGAGGCAA 
ATCCTCTGCT TCTCCGGCTC TCCCTGCTTC TCAATCCCTT CCACCCGTGG ACTTTTGTTC 
CCGCTTGTGG ACTTTTGTTC CCGCTTCTCC TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

WNT/TCF signaling through LEF1 and HOXB9 mediates lung adenocarcinoma metastasis.
Cell138(1)51-62(2009 Jul)
Nguyen DX,Chiang AC,Zhang XH,Kim JY,Kris MG,Ladanyi M,Gerald WL,Massagu? J


book

Rostral hindbrain patterning involves the direct activation of a Krox20 transcriptional enhancer by Hox/Pbx and Meis factors.
Development (Cambridge, England)135(20)3369-78(2008 Oct)
Wassef MA,Chomette D,Pouilhe M,Stedman A,Havis E,Desmarquet-Trin Dinh C,Schneider-Maunoury S,Gilardi-Hebenstreit P,Charnay P,Ghislain J


book

Hox patterning of the vertebrate rib cage.
Development (Cambridge, England)134(16)2981-9(2007 Aug)
McIntyre DC,Rakshit S,Yallowitz AR,Loken L,Jeannotte L,Capecchi MR,Wellik DM


book

A large targeted deletion of Hoxb1-Hoxb9 produces a series of single-segment anterior homeotic transformations.
Developmental biology222(1)71-83(2000 Jun)
Medina-Mart?nez O,Bradley A,Ram?rez-Solis R


book

Paralogous mouse Hox genes, Hoxa9, Hoxb9, and Hoxd9, function together to control development of the mammary gland in response to pregnancy.
Proceedings of the National Academy of Sciences of the United States of America96(2)541-6(1999 Jan)
Chen F,Capecchi MR