Gene Symbol | Sympk |
Entrez Gene ID | 292683 |
Full Name | symplekin |
Synonyms | Hfn3g |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Sympk cDNA ORF clone
Gene Symbol | Sympk |
Entrez Gene ID | 292683 |
Full Name | symplekin |
Synonyms | Hfn3g |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_008758908.2 | XP_008757130.2 | symplekin isoform X1 |
NM_001100830.1 | NP_001094300.1 | symplekin |
Bos taurus (cattle) | SYMPK | NP_001193842.1 |
Danio rerio (zebrafish) | si:dkeyp-117b8.1 | XP_005165630.1 |
Homo sapiens (human) | SYMPK | NP_004810.2 |
Caenorhabditis elegans (roundworm) | symk-1 | NP_505210.2 |
Mus musculus (house mouse) | Sympk | NP_080881.2 |
Rattus norvegicus (Norway rat) | Sympk | NP_001094300.1 |
Canis lupus familiaris (dog) | SYMPK | XP_533638.2 |
Drosophila melanogaster (fruit fly) | Sym | NP_649580.1 |
Xenopus tropicalis (tropical clawed frog) | sympk | NP_989259.2 |
Pan troglodytes (chimpanzee) | SYMPK | XP_001166898.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002618 | XP_312315.5 |
Structural dissection of an interaction between transcription initiation and termination factors implicated in promoter-terminator crosstalk.
Bratkowski M, Unarta IC, Zhu L, Shubbar M, Huang X, Liu X
The Journal of biological chemistry(2017 Nov)
Means to an end: mechanisms of alternative polyadenylation of messenger RNA precursors.
Gruber AR, Martin G, Keller W, Zavolan M
Wiley interdisciplinary reviews. RNA5(2)183-96(2014 Mar-Apr)
Pre-mRNA 3'-end processing complex assembly and function.
Chan S, Choi EA, Shi Y
Wiley interdisciplinary reviews. RNA2(3)321-35(2011 May-Jun)
Crystal structure of the human symplekin-Ssu72-CTD phosphopeptide complex.
Xiang K, Nagaike T, Xiang S, Kilic T, Beh MM, Manley JL, Tong L
Nature467(7316)729-33(2010 Oct)
HSF1 modulation of Hsp70 mRNA polyadenylation via interaction with symplekin.
Xing H, Mayhew CN, Cullen KE, Park-Sarge OK, Sarge KD
The Journal of biological chemistry279(11)10551-5(2004 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Sympk gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sympk cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa56439 | |
Clone ID Related Accession (Same CDS sequence) | XM_008758908.2 | |
Accession Version | XM_008758908.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3843bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | symplekin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008758908.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAAGCG GCAGCGGGGA CAGTGTCACC CGCCGGAGTG TGGCATCACA GTTTTTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008757130.2 |
CDS | 164..4006 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008758908.2 |
1 | ATGGCAAGCG GCAGCGGGGA CAGTGTCACC CGCCGGAGTG TGGCATCACA GTTTTTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa10798 | |
Clone ID Related Accession (Same CDS sequence) | NM_001100830.1 | |
Accession Version | NM_001100830.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3843bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-18 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | symplekin | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC120692.6. On or before Dec 19, 2009 this sequence version replaced XM_001075350.1, XM_214843.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCAAGCG GCAGCGGGGA CAGTGTCACC CGCCGGAGTG TGGCATCACA GTTTTTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001094300.1 |
CDS | 105..3947 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001100830.1 |
1 | ATGGCAAGCG GCAGCGGGGA CAGTGTCACC CGCCGGAGTG TGGCATCACA GTTTTTCACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Structural dissection of an interaction between transcription initiation and termination factors implicated in promoter-terminator crosstalk. |
Means to an end: mechanisms of alternative polyadenylation of messenger RNA precursors. |
Pre-mRNA 3'-end processing complex assembly and function. |
Crystal structure of the human symplekin-Ssu72-CTD phosphopeptide complex. |
HSF1 modulation of Hsp70 mRNA polyadenylation via interaction with symplekin. |