Gene Symbol | Yif1b |
Entrez Gene ID | 292768 |
Full Name | Yip1 interacting factor homolog B, membrane trafficking protein |
Synonyms | Yip1b |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Yif1b cDNA ORF clone
Gene Symbol | Yif1b |
Entrez Gene ID | 292768 |
Full Name | Yip1 interacting factor homolog B, membrane trafficking protein |
Synonyms | Yip1b |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_008759129.2 | XP_008757351.1 | protein YIF1B isoform X2 |
NM_198734.2 | NP_942029.2 | protein YIF1B isoform a |
NM_001014810.1 | NP_001014810.1 | protein YIF1B isoform b |
XM_008759128.2 | XP_008757350.1 | protein YIF1B isoform X1 |
Homo sapiens (human) | YIF1B | NP_001034761.1 |
Pan troglodytes (chimpanzee) | YIF1B | XP_512634.1 |
Danio rerio (zebrafish) | yif1b | NP_001007335.2 |
Drosophila melanogaster (fruit fly) | CG5484 | NP_733163.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002175 | XP_308013.5 |
Oryza sativa (rice) | Os04g0165400 | NP_001052132.1 |
Xenopus tropicalis (tropical clawed frog) | yif1b | NP_989282.1 |
Canis lupus familiaris (dog) | YIF1B | XP_005616684.1 |
Bos taurus (cattle) | YIF1B | XP_002695013.1 |
Arabidopsis thaliana (thale cress) | AT1G30890 | NP_001077633.1 |
Arabidopsis thaliana (thale cress) | AT3G59500 | NP_191509.2 |
LOC719551 | XP_002801258.1 | |
Rattus norvegicus (Norway rat) | Yif1b | NP_942029.2 |
Mus musculus (house mouse) | Yif1b | NP_084163.2 |
A new vesicular scaffolding complex mediates the G-protein-coupled 5-HT1A receptor targeting to neuronal dendrites.
Al Awabdh S, Miserey-Lenkei S, Bouceba T, Masson J, Kano F, Marinach-Patrice C, Hamon M, Emerit MB, Darmon M
The Journal of neuroscience : the official journal of the Society for Neuroscience32(41)14227-41(2012 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
A new protein trafficking pathway model is proposed in which Yif1B is the scaffold protein recruiting the 5-HT1A receptor complex.
Title: A new vesicular scaffolding complex mediates the G-protein-coupled 5-HT1A receptor targeting to neuronal dendrites.
The following Yif1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Yif1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa04829 | |
Clone ID Related Accession (Same CDS sequence) | NM_198734.2 | |
Accession Version | NM_198734.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 936bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-15 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein YIF1B isoform a | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CB797587.1, CB576820.1, CB809766.1 and BC058153.1. On Apr 7, 2005 this sequence version replaced NM_198734.1. ##Evidence-Data-START## Transcript exon combination :: FQ213940.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCACGCGA CAGGTTTGGC GGCGCCGGCG GGGACGCCCC GGCTGCGTAA GTGGCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_942029.2 |
CDS | 42..977 |
Translation |
Target ORF information:
Target ORF information:
|
NM_198734.2 |
1 | ATGCACGCGA CAGGTTTGGC GGCGCCGGCG GGGACGCCCC GGCTGCGTAA GTGGCCCTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa05649 | |
Clone ID Related Accession (Same CDS sequence) | NM_001014810.1 | |
Accession Version | NM_001014810.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 912bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-09-15 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein YIF1B isoform b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC058153.1 and CB751111.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGCCACGTC CGGGTAGGGG GCGCATCGCG GCCTCAAAGC GGAGGGTCCC AGTGTCCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001014810.1 |
CDS | 56..967 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001014810.1 |
1 | ATGCCACGTC CGGGTAGGGG GCGCATCGCG GCCTCAAAGC GGAGGGTCCC AGTGTCCCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa22526 | |
Clone ID Related Accession (Same CDS sequence) | XM_008759128.2 | |
Accession Version | XM_008759128.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 927bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein YIF1B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008759128.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCACGCGA CAGGTTTGGC GGCGCCGGCG GGGACGCCCC GGCTGCCCTC AAAGCGGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008757350.1 |
CDS | 73..999 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008759128.2 |
1 | ATGCACGCGA CAGGTTTGGC GGCGCCGGCG GGGACGCCCC GGCTGCCCTC AAAGCGGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa22527 | |
Clone ID Related Accession (Same CDS sequence) | XM_008759129.2 | |
Accession Version | XM_008759129.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 846bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protein YIF1B isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008759129.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGATC CCCACCAGTT TTTTGACGAC ACGAGTTCAG CCCCGAGCCG GGGCTATGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008757351.1 |
CDS | 143..988 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008759129.2 |
1 | ATGGCTGATC CCCACCAGTT TTTTGACGAC ACGAGTTCAG CCCCGAGCCG GGGCTATGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new vesicular scaffolding complex mediates the G-protein-coupled 5-HT1A receptor targeting to neuronal dendrites. |