Gene Symbol | Ctr9 |
Entrez Gene ID | 293184 |
Full Name | CTR9 homolog, Paf1/RNA polymerase II complex component |
Synonyms | Sh2bp1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Ctr9 cDNA ORF clone
Gene Symbol | Ctr9 |
Entrez Gene ID | 293184 |
Full Name | CTR9 homolog, Paf1/RNA polymerase II complex component |
Synonyms | Sh2bp1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001100661.1 | NP_001094131.1 | RNA polymerase-associated protein CTR9 homolog |
Caenorhabditis elegans (roundworm) | B0464.2 | NP_001254998.1 |
Canis lupus familiaris (dog) | CTR9 | XP_003639833.1 |
Drosophila melanogaster (fruit fly) | CG2469 | NP_788448.1 |
Xenopus tropicalis (tropical clawed frog) | ctr9 | NP_001005076.1 |
Bos taurus (cattle) | CTR9 | NP_001192326.1 |
Gallus gallus (chicken) | CTR9 | XP_420968.3 |
Danio rerio (zebrafish) | ctr9 | NP_001077052.1 |
Rattus norvegicus (Norway rat) | Ctr9 | NP_001094131.1 |
Oryza sativa (rice) | Os07g0476200 | NP_001059625.1 |
Homo sapiens (human) | CTR9 | NP_055448.1 |
Pan troglodytes (chimpanzee) | CTR9 | XP_521841.3 |
CTR9 | XP_001094093.2 | |
Mus musculus (house mouse) | Ctr9 | NP_033457.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001559 | XP_321554.1 |
Arabidopsis thaliana (thale cress) | ELF8 | NP_178674.6 |
Regulation of transcriptional elongation in pluripotency and cell differentiation by the PHD-finger protein Phf5a.
Strikoudis A, Lazaris C, Trimarchi T, Galvao Neto AL, Yang Y, Ntziachristos P, Rothbart S, Buckley S, Dolgalev I, Stadtfeld M, Strahl BD, Dynlacht BD, Tsirigos A, Aifantis I
Nature cell biology18(11)1127-1138(2016 Nov)
Towards Functional Annotation of the Preimplantation Transcriptome: An RNAi Screen in Mammalian Embryos.
Cui W, Dai X, Marcho C, Han Z, Zhang K, Tremblay KD, Mager J
Scientific reports637396(2016 Nov)
Ctr9, a Protein in the Transcription Complex Paf1, Regulates Dopamine Transporter Activity at the Plasma Membrane.
De Gois S, Slama P, Pietrancosta N, Erdozain AM, Louis F, Bouvrais-Veret C, Daviet L, Giros B
The Journal of biological chemistry290(29)17848-62(2015 Jul)
CTR9/PAF1c regulates molecular lineage identity, histone H3K36 trimethylation and genomic imprinting during preimplantation development.
Zhang K, Haversat JM, Mager J
Developmental biology383(1)15-27(2013 Nov)
The PAF complex synergizes with MLL fusion proteins at HOX loci to promote leukemogenesis.
Muntean AG, Tan J, Sitwala K, Huang Y, Bronstein J, Connelly JA, Basrur V, Elenitoba-Johnson KS, Hess JL
Cancer cell17(6)609-21(2010 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Ctr9, formerly identified as a nuclei protein, interacts with the dopamine transporter in the cytoplasmic compartment.
Title: Ctr9, a Protein in the Transcription Complex Paf1, Regulates Dopamine Transporter Activity at the Plasma Membrane.
The following Ctr9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ctr9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa04552 | |
Clone ID Related Accession (Same CDS sequence) | NM_001100661.1 | |
Accession Version | NM_001100661.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3522bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-18 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | RNA polymerase-associated protein CTR9 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07005030.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGTCGCGGG GTTCCATCGA GATTCCCCTC CGGGATACTG ACGAGGTCAT TGAACTTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001094131.1 |
CDS | 124..3645 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001100661.1 |
1 | ATGTCGCGGG GTTCCATCGA GATTCCCCTC CGGGATACTG ACGAGGTCAT TGAACTTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Regulation of transcriptional elongation in pluripotency and cell differentiation by the PHD-finger protein Phf5a. |
Towards Functional Annotation of the Preimplantation Transcriptome: An RNAi Screen in Mammalian Embryos. |
Ctr9, a Protein in the Transcription Complex Paf1, Regulates Dopamine Transporter Activity at the Plasma Membrane. |
CTR9/PAF1c regulates molecular lineage identity, histone H3K36 trimethylation and genomic imprinting during preimplantation development. |
The PAF complex synergizes with MLL fusion proteins at HOX loci to promote leukemogenesis. |