Gene Symbol | Sgf29 |
Entrez Gene ID | 293488 |
Full Name | SAGA complex associated factor 29 |
Synonyms | Ccdc101,RGD1310609 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Sgf29 cDNA ORF clone
Gene Symbol | Sgf29 |
Entrez Gene ID | 293488 |
Full Name | SAGA complex associated factor 29 |
Synonyms | Ccdc101,RGD1310609 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006230232.3 | XP_006230294.1 | SAGA-associated factor 29 isoform X1 |
XM_006230231.3 | XP_006230293.1 | SAGA-associated factor 29 isoform X1 |
NM_001114502.1 | NP_001107974.1 | SAGA-associated factor 29 |
Pan troglodytes (chimpanzee) | CCDC101 | XP_510901.1 |
Bos taurus (cattle) | CCDC101 | NP_001068940.2 |
Xenopus tropicalis (tropical clawed frog) | ccdc101 | NP_001120013.1 |
Homo sapiens (human) | CCDC101 | NP_612423.1 |
CCDC101 | XP_001109273.1 | |
Canis lupus familiaris (dog) | CCDC101 | XP_005621416.1 |
Gallus gallus (chicken) | CCDC101 | NP_001026469.1 |
Danio rerio (zebrafish) | ccdc101 | NP_001005986.1 |
Drosophila melanogaster (fruit fly) | Sgf29 | NP_726051.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP005116 | XP_313997.4 |
Mus musculus (house mouse) | Ccdc101 | NP_083615.3 |
Rattus norvegicus (Norway rat) | Ccdc101 | NP_001107974.1 |
Caenorhabditis elegans (roundworm) | Y17G9B.8 | NP_500635.3 |
The Role of Electrostatic Interactions in Binding of Histone H3K4me2/3 to the Sgf29 Tandem Tudor Domain.
Pieters BJ, Meulenbroeks E, Belle R, Mecinovi? J
PloS one10(9)e0139205(2015)
The male-specific factor Sry harbors an oncogenic function.
Murakami S, Chishima S, Uemoto H, Sakamoto E, Sato T, Kurabe N, Kawasaki Y, Shibata T, Akiyama H, Tashiro F
Oncogene33(23)2978-86(2014 Jun)
Tudor: a versatile family of histone methylation 'readers'.
Lu R, Wang GG
Trends in biochemical sciences38(11)546-55(2013 Nov)
Readout of epigenetic modifications.
Patel DJ, Wang Z
Annual review of biochemistry8281-118(2013)
A dual role for SAGA-associated factor 29 (SGF29) in ER stress survival by coordination of both histone H3 acetylation and histone H3 lysine-4 trimethylation.
Schram AW, Baas R, Jansen PW, Riss A, Tora L, Vermeulen M, Timmers HT
PloS one8(7)e70035(2013)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data show that Sry is involved in male-specific malignant conversion of rodent hepatocellular carcinoma via Sgf29 upregulation.
Title: The male-specific factor Sry harbors an oncogenic function.
The following Sgf29 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sgf29 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa01095 | |
Clone ID Related Accession (Same CDS sequence) | NM_001114502.1 | |
Accession Version | NM_001114502.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 798bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-23 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | SAGA-associated factor 29 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473956.2. On or before Feb 11, 2008 this sequence version replaced XM_001077352.1, XM_215064.4. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCCCTTG TGTCTGCTGA CTCTCGAATT GCAGAGCTTC TCACAGAGCT CCATCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001107974.1 |
CDS | 193..990 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001114502.1 |
1 | ATGGCCCTTG TGTCTGCTGA CTCTCGAATT GCAGAGCTTC TCACAGAGCT CCATCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa23413 | |
Clone ID Related Accession (Same CDS sequence) | XM_006230232.3 , XM_006230231.3 | |
Accession Version | XM_006230232.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | SAGA-associated factor 29 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006230232.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCTTG TGTCTGCTGA CTCTCGAATT GCAGAGCTTC TCACAGAGCT CCATCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006230294.1 |
CDS | 189..1070 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006230232.3 |
1 | ATGGCCCTTG TGTCTGCTGA CTCTCGAATT GCAGAGCTTC TCACAGAGCT CCATCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa23413 | |
Clone ID Related Accession (Same CDS sequence) | XM_006230232.3 , XM_006230231.3 | |
Accession Version | XM_006230231.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 882bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | SAGA-associated factor 29 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006230231.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCTTG TGTCTGCTGA CTCTCGAATT GCAGAGCTTC TCACAGAGCT CCATCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006230293.1 |
CDS | 281..1162 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006230231.3 |
1 | ATGGCCCTTG TGTCTGCTGA CTCTCGAATT GCAGAGCTTC TCACAGAGCT CCATCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The Role of Electrostatic Interactions in Binding of Histone H3K4me2/3 to the Sgf29 Tandem Tudor Domain. |
The male-specific factor Sry harbors an oncogenic function. |
Tudor: a versatile family of histone methylation 'readers'. |
Readout of epigenetic modifications. |
A dual role for SAGA-associated factor 29 (SGF29) in ER stress survival by coordination of both histone H3 acetylation and histone H3 lysine-4 trimethylation. |