Gene Symbol | Phlda2 |
Entrez Gene ID | 293637 |
Full Name | pleckstrin homology-like domain, family A, member 2 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Phlda2 cDNA ORF clone
Gene Symbol | Phlda2 |
Entrez Gene ID | 293637 |
Full Name | pleckstrin homology-like domain, family A, member 2 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_008760095.2 | XP_008758317.1 | pleckstrin homology-like domain family A member 2 isoform X1 |
NM_001100521.1 | NP_001093991.1 | pleckstrin homology-like domain family A member 2 isoform 1 |
XM_008760096.2 | XP_008758318.1 | pleckstrin homology-like domain family A member 2 isoform X2 |
NM_001170480.1 | NP_001163951.1 | pleckstrin homology-like domain family A member 2 isoform 2 |
Danio rerio (zebrafish) | phlda2 | NP_001018432.1 |
Xenopus tropicalis (tropical clawed frog) | phlda2 | NP_001072825.1 |
Homo sapiens (human) | PHLDA2 | NP_003302.1 |
PHLDA2 | XP_001094620.1 | |
Gallus gallus (chicken) | PHLDA2 | NP_001186524.1 |
Rattus norvegicus (Norway rat) | Phlda2 | NP_001093991.1 |
Pan troglodytes (chimpanzee) | PHLDA2 | XP_001155149.1 |
Bos taurus (cattle) | PHLDA2 | NP_001069989.1 |
Mus musculus (house mouse) | Phlda2 | NP_033460.1 |
The imprinted Phlda2 gene modulates a major endocrine compartment of the placenta to regulate placental demands for maternal resources.
Tunster SJ, Creeth HD, John RM
Developmental biology409(1)251-60(2016 Jan)
The imprinted Phlda2 gene regulates extraembryonic energy stores.
Tunster SJ, Tycko B, John RM
Molecular and cellular biology30(1)295-306(2010 Jan)
Placental overgrowth in mice lacking the imprinted gene Ipl.
Frank D, Fortino W, Clark L, Musalo R, Wang W, Saxena A, Li CM, Reik W, Ludwig T, Tycko B
Proceedings of the National Academy of Sciences of the United States of America99(11)7490-5(2002 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Phlda2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Phlda2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa00914 | |
Clone ID Related Accession (Same CDS sequence) | NM_001100521.1 | |
Accession Version | NM_001100521.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 417bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | pleckstrin homology-like domain family A member 2 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC112093.6. On or before May 22, 2010 this sequence version replaced XM_001065824.2, XM_215132.4, XM_002728847.1, XM_002725758.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: EF088428.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2689597, SAMN01906356 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTTCGA AAACCGTGAA GACTTCCGAT GAGATTCTTT GCGAGGGCGA GCTGGAGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001093991.1 |
CDS | 17..433 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001100521.1 |
1 | ATGGCTTCGA AAACCGTGAA GACTTCCGAT GAGATTCTTT GCGAGGGCGA GCTGGAGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa06272 | |
Clone ID Related Accession (Same CDS sequence) | NM_001170480.1 | |
Accession Version | NM_001170480.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 369bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-01 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | pleckstrin homology-like domain family A member 2 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC112093.6. Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. It encodes isoform 2, which has a shorter and distinct C-terminus, compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BF551609.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2689597, SAMEA2689598 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTTCGA AAACCGTGAA GACTTCCGAT GAGATTCTTT GCGAGGGCGA GCTGGAGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001163951.1 |
CDS | 17..385 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001170480.1 |
1 | ATGGCTTCGA AAACCGTGAA GACTTCCGAT GAGATTCTTT GCGAGGGCGA GCTGGAGAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa45135 | |
Clone ID Related Accession (Same CDS sequence) | XM_008760095.2 | |
Accession Version | XM_008760095.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 594bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | pleckstrin homology-like domain family A member 2 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008760095.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCGCCC GAGGTGGGAG GAGACGGTGG CCAGGGCTTG GAAAGAACCC GTGGGTCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008758317.1 |
CDS | 471..1064 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008760095.2 |
1 | ATGTTCGCCC GAGGTGGGAG GAGACGGTGG CCAGGGCTTG GAAAGAACCC GTGGGTCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa45136 | |
Clone ID Related Accession (Same CDS sequence) | XM_008760096.2 | |
Accession Version | XM_008760096.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 543bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | pleckstrin homology-like domain family A member 2 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008760096.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTCGCCC GAGGTGGGAG GAGACGGTGG CCAGGGCTTG GAAAGAACCC GTGGGTCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008758318.1 |
CDS | 467..1009 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008760096.2 |
1 | ATGTTCGCCC GAGGTGGGAG GAGACGGTGG CCAGGGCTTG GAAAGAACCC GTGGGTCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The imprinted Phlda2 gene modulates a major endocrine compartment of the placenta to regulate placental demands for maternal resources. |
The imprinted Phlda2 gene regulates extraembryonic energy stores. |
Placental overgrowth in mice lacking the imprinted gene Ipl. |