Gene Symbol | Shq1 |
Entrez Gene ID | 297483 |
Full Name | SHQ1, H/ACA ribonucleoprotein assembly factor |
Synonyms | RGD1310610 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Shq1 cDNA ORF clone
gRNAs
Gene Symbol | Shq1 |
Entrez Gene ID | 297483 |
Full Name | SHQ1, H/ACA ribonucleoprotein assembly factor |
Synonyms | RGD1310610 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_008763164.2 | XP_008761386.1 | SHQ1 homolog isoform X3 |
XM_008763162.1 | XP_008761384.1 | SHQ1 homolog isoform X1 |
NM_001134713.1 | NP_001128185.1 | SHQ1 homolog |
XM_017592565.1 | XP_017448054.1 | SHQ1 homolog isoform X2 |
Bos taurus (cattle) | SHQ1 | NP_001030221.1 |
Rattus norvegicus (Norway rat) | Shq1 | NP_001128185.1 |
Danio rerio (zebrafish) | shq1 | NP_001074069.1 |
Xenopus tropicalis (tropical clawed frog) | shq1 | NP_001072616.1 |
Pan troglodytes (chimpanzee) | SHQ1 | XP_001141951.1 |
Mus musculus (house mouse) | Shq1 | NP_853621.2 |
Kluyveromyces lactis | KLLA0F03949g | XP_455259.1 |
Homo sapiens (human) | SHQ1 | NP_060600.2 |
SHQ1 | XP_001082636.1 | |
Caenorhabditis elegans (roundworm) | CELE_Y48A5A.1 | NP_500150.2 |
Saccharomyces cerevisiae (baker's yeast) | SHQ1 | NP_012162.3 |
Canis lupus familiaris (dog) | SHQ1 | XP_533763.2 |
Gallus gallus (chicken) | SHQ1 | XP_004944749.1 |
Eremothecium gossypii | AGOS_ADL230C | NP_983866.1 |
Schizosaccharomyces pombe (fission yeast) | shq1 | NP_595575.1 |
Proteostatic control of telomerase function through TRiC-mediated folding of TCAB1.
Freund A, Zhong FL, Venteicher AS, Meng Z, Veenstra TD, Frydman J, Artandi SE
Cell159(6)1389-403(2014 Dec)
Identification and characterization of GRIM-1, a cell-death-associated gene product.
Hofmann ER, Nallar SC, Lin L, D'Cunha J, Lindner DJ, Weihua X, Kalvakolanu DV
Journal of cell science123(Pt 16)2781-91(2010 Aug)
SHQ1 is required prior to NAF1 for assembly of H/ACA small nucleolar and telomerase RNPs.
Grozdanov PN, Roy S, Kittur N, Meier UT
RNA (New York, N.Y.)15(6)1188-97(2009 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Shq1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Shq1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa45458 | |
Clone ID Related Accession (Same CDS sequence) | XM_008763162.1 | |
Accession Version | XM_008763162.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1713bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | SHQ1 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTAACTC CTGCGTTCGA ACTGACCCAG GACCGCGACT TCCTTACCGT CGCCATCCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008761384.1 |
CDS | 96..1808 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCTAACTC CTGCGTTCGA ACTGACCCAG GACCGCGACT TCCTTACCGT CGCCATCCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa45459 | |
Clone ID Related Accession (Same CDS sequence) | XM_008763164.2 | |
Accession Version | XM_008763164.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 231bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | SHQ1 homolog isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008763164.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTAACTC CTGCGTTCGA ACTGACCCAG GACCGCGACT TCCTTACCGT CGCCATCCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008761386.1 |
CDS | 96..326 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTAACTC CTGCGTTCGA ACTGACCCAG GACCGCGACT TCCTTACCGT CGCCATCCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa60819 | |
Clone ID Related Accession (Same CDS sequence) | XM_017592565.1 | |
Accession Version | XM_017592565.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1479bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | SHQ1 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTAACTC CTGCGTTCGA ACTGACCCAG GACCGCGACT TCCTTACCGT CGCCATCCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017448054.1 |
CDS | 96..1574 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTAACTC CTGCGTTCGA ACTGACCCAG GACCGCGACT TCCTTACCGT CGCCATCCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa02772 | |
Clone ID Related Accession (Same CDS sequence) | NM_001134713.1 | |
Accession Version | NM_001134713.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1812bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-27 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | SHQ1 homolog | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC168172.1. On or before Sep 5, 2008 this sequence version replaced XM_001075316.1, XM_232222.4. ##Evidence-Data-START## Transcript exon combination :: BC168172.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCTAACTC CTGCGTTCGA ACTGACCCAG GACCGCGACT TCCTTACCGT CGCCATCCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001128185.1 |
CDS | 88..1899 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTAACTC CTGCGTTCGA ACTGACCCAG GACCGCGACT TCCTTACCGT CGCCATCCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Proteostatic control of telomerase function through TRiC-mediated folding of TCAB1. |
Identification and characterization of GRIM-1, a cell-death-associated gene product. |
SHQ1 is required prior to NAF1 for assembly of H/ACA small nucleolar and telomerase RNPs. |