Rattus norvegicus (Norway rat) |
Atrip |
NP_001100329.1 |
Danio rerio (zebrafish) |
atrip |
NP_001038332.1 |
Canis lupus familiaris (dog) |
ATRIP |
XP_005632647.1 |
Bos taurus (cattle) |
ATRIP |
NP_001096800.1 |
Homo sapiens (human) |
ATRIP |
NP_569055.1 |
|
ATRIP |
XP_001112538.2 |
Gallus gallus (chicken) |
ATRIP |
NP_001243080.1 |
Xenopus tropicalis (tropical clawed frog) |
atrip |
NP_001015895.2 |
Pan troglodytes (chimpanzee) |
ATRIP |
XP_001156485.2 |
Mus musculus (house mouse) |
Atrip |
NP_766362.2 |
Related articles in PubMed
PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.
Mar?chal A, Li JM, Ji XY, Wu CS, Yazinski SA, Nguyen HD, Liu S, Jim?nez AE, Jin J, Zou L
Molecular cell53(2)235-246(2014 Jan)
ATR-Chk2 signaling in p53 activation and DNA damage response during cisplatin-induced apoptosis.
Pabla N, Huang S, Mi QS, Daniel R, Dong Z
The Journal of biological chemistry283(10)6572-83(2008 Mar)
ATR and ATRIP: partners in checkpoint signaling.
Cortez D, Guntuku S, Qin J, Elledge SJ
Science (New York, N.Y.)294(5547)1713-6(2001 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Atrip gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Atrip cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
ORa31574 |
Clone ID Related Accession (Same CDS sequence) |
XM_006243767.3
|
Accession Version |
XM_006243767.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 1893bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-07-25 |
Organism |
Rattus norvegicus(Norway rat) |
Product |
ATR-interacting protein isoform X2 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jul 26, 2016 this sequence version replaced XM_006243767.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861
| ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC TCAGGCTACA ATGAAAAGGG GGACCCTGAG TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_006243829.1 |
CDS | 106..1998 |
Translation | |
Target ORF information:
RefSeq Version | XM_006243767.3 |
Organism | Rattus norvegicus(Norway rat) |
Definition | Rattus norvegicus ATR interacting protein (Atrip), transcript variant X4, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_006243767.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861
| ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC TCAGGCTACA ATGAAAAGGG GGACCCTGAG TGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ORa02369 |
Clone ID Related Accession (Same CDS sequence) |
NM_001106859.1
|
Accession Version |
NM_001106859.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2355bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2017-10-01 |
Organism |
Rattus norvegicus(Norway rat) |
Product |
ATR-interacting protein |
Comment |
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473954.2. On or before Oct 4, 2007 this sequence version replaced XM_001076248.1, XM_001055797.1.
##Evidence-Data-START##
RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350]
##Evidence-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341
| ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC TCAGAAGGCT GCCTTCTCCT GAGGCTGTAC ATGTACATTA CATCAAGGCC TGACAAAACG GCCTCAGAGA CACAGTGGCT TCAGCTGGAA CAAGAGGTAG TGTGGCTCTT GGCCAAGCTG AGTGTGCAGA GCCCTTCCCC CGCTGGCATT GTTTCTGACT GTCAGTGCAA TGTAGAGGCA GTCAGAGCAC TCACTGTGAT GTTGCACAGG CAATGGCTGA CTGTGCGGCG GGCAGGGGGT CCAAGGACCC ACCAGCAGAA GCAGACGGTC CGCTGTCTGC GGGACACTGT GCTGCTGCTG CACAGCCTAT CTCAGAAGGA CAAGCTCTTT ACTGTGCACT GTGTCGAGGT CCTGCATCAG TACGACCAGG TGATGCCAGG GGTCAGCATG CTGATTCGAG CCCTTCCTGA TGTGACTGAC TGTGAAGAGG CTGCCCTGGA TGACCTCTGT GCTGCAGAGA CAGATTTGGA AGACGCCGAG ATGGACTGTA GCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_001100329.1 |
CDS | 108..2462 |
Translation | |
Target ORF information:
RefSeq Version | NM_001106859.1 |
Organism | Rattus norvegicus(Norway rat) |
Definition | Rattus norvegicus ATR interacting protein (Atrip), mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001106859.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341
| ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC TCAGAAGGCT GCCTTCTCCT GAGGCTGTAC ATGTACATTA CATCAAGGCC TGACAAAACG GCCTCAGAGA CACAGTGGCT TCAGCTGGAA CAAGAGGTAG TGTGGCTCTT GGCCAAGCTG AGTGTGCAGA GCCCTTCCCC CGCTGGCATT GTTTCTGACT GTCAGTGCAA TGTAGAGGCA GTCAGAGCAC TCACTGTGAT GTTGCACAGG CAATGGCTGA CTGTGCGGCG GGCAGGGGGT CCAAGGACCC ACCAGCAGAA GCAGACGGTC CGCTGTCTGC GGGACACTGT GCTGCTGCTG CACAGCCTAT CTCAGAAGGA CAAGCTCTTT ACTGTGCACT GTGTCGAGGT CCTGCATCAG TACGACCAGG TGATGCCAGG GGTCAGCATG CTGATTCGAG CCCTTCCTGA TGTGACTGAC TGTGAAGAGG CTGCCCTGGA TGACCTCTGT GCTGCAGAGA CAGATTTGGA AGACGCCGAG ATGGACTGTA GCTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID |
ORa31573 |
Clone ID Related Accession (Same CDS sequence) |
XM_006243766.3
|
Accession Version |
XM_006243766.3 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 2067bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2016-07-25 |
Organism |
Rattus norvegicus(Norway rat) |
Product |
ATR-interacting protein isoform X1 |
Comment |
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jul 26, 2016 this sequence version replaced XM_006243766.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041
| ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC TCAGAAGGCT GCCTTCTCCT GAGGCTGTAC ATGTACATTA CATCAAGGCC TGACAAAACG GCCTCAGAGA CACAGTGGCT TCAGCTGGAA CAAGAGATGC AATACAAGTG CATCCTGGGT TGCAGTGGTG CTCAGCAGAG TTGCCTGATC ATGCTGCCTG GGGCTTGGGG CCTGATCCTG GTCCTGGAAG CAGTGAGCTG TTGGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
XP_006243828.1 |
CDS | 107..2173 |
Translation | |
Target ORF information:
RefSeq Version | XM_006243766.3 |
Organism | Rattus norvegicus(Norway rat) |
Definition | Rattus norvegicus ATR interacting protein (Atrip), transcript variant X2, mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
XM_006243766.3 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041
| ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC TCAGAAGGCT GCCTTCTCCT GAGGCTGTAC ATGTACATTA CATCAAGGCC TGACAAAACG GCCTCAGAGA CACAGTGGCT TCAGCTGGAA CAAGAGATGC AATACAAGTG CATCCTGGGT TGCAGTGGTG CTCAGCAGAG TTGCCTGATC ATGCTGCCTG GGGCTTGGGG CCTGATCCTG GTCCTGGAAG CAGTGAGCTG TTGGTGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.