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Atrip cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Atrip
Entrez Gene ID 301014
Full Name ATR interacting protein
General protein information
Preferred Names

ATR interacting protein

Names

ATR-interacting protein
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

8

8q32

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
XM_006243766.3 XP_006243828.1 ATR-interacting protein isoform X1
XM_006243767.3 XP_006243829.1 ATR-interacting protein isoform X2
NM_001106859.1 NP_001100329.1 ATR-interacting protein

Pathways from BioSystems


Homologies


Rattus norvegicus (Norway rat) Atrip NP_001100329.1
Danio rerio (zebrafish) atrip NP_001038332.1
Canis lupus familiaris (dog) ATRIP XP_005632647.1
Bos taurus (cattle) ATRIP NP_001096800.1
Homo sapiens (human) ATRIP NP_569055.1
ATRIP XP_001112538.2
Gallus gallus (chicken) ATRIP NP_001243080.1
Xenopus tropicalis (tropical clawed frog) atrip NP_001015895.2
Pan troglodytes (chimpanzee) ATRIP XP_001156485.2
Mus musculus (house mouse) Atrip NP_766362.2

Gene Ontology


Bibliography

Related articles in PubMed

PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.
Mar?chal A, Li JM, Ji XY, Wu CS, Yazinski SA, Nguyen HD, Liu S, Jim?nez AE, Jin J, Zou L
Molecular cell53(2)235-246(2014 Jan)

ATR-Chk2 signaling in p53 activation and DNA damage response during cisplatin-induced apoptosis.
Pabla N, Huang S, Mi QS, Daniel R, Dong Z
The Journal of biological chemistry283(10)6572-83(2008 Mar)

ATR and ATRIP: partners in checkpoint signaling.
Cortez D, Guntuku S, Qin J, Elledge SJ
Science (New York, N.Y.)294(5547)1713-6(2001 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

an important role for the DNA damage response mediated by ATR-Chk2 in p53 activation and renal cell apoptosis during cisplatin nephrotoxicity.
Title: ATR-Chk2 signaling in p53 activation and DNA damage response during cisplatin-induced apoptosis.

The following Atrip gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Atrip cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa31574 XM_006243767.3
Latest version!		 Rattus norvegicus ATR interacting protein (Atrip), transcript variant X4, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 7-9 $307.30
$439.00
ORa02369 NM_001106859.1
Latest version!		 Rattus norvegicus ATR interacting protein (Atrip), mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $461.30
$659.00
ORa31573 XM_006243766.3
Latest version!		 Rattus norvegicus ATR interacting protein (Atrip), transcript variant X2, mRNA. pcDNA3.1+/C-(K)DYK or customized vector 12-14 $391.30
$559.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
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*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa31574
Clone ID Related Accession (Same CDS sequence) XM_006243767.3
Accession Version XM_006243767.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 1893bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product ATR-interacting protein isoform X2
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006243767.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC 
CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG 
ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC 
CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG 
AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG 
AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG 
TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA 
GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA 
AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA 
TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT 
GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC 
TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA 
CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC 
CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT 
AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC 
AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA 
CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT 
CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC 
AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC 
TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA 
GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT 
GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG 
AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT 
AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT 
CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC 
AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC 
AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG 
GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA 
GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG 
TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT 
GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC 
TCAGGCTACA ATGAAAAGGG GGACCCTGAG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006243829.1
CDS106..1998
Translation

Target ORF information:

RefSeq Version XM_006243767.3
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus ATR interacting protein (Atrip), transcript variant X4, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006243767.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC 
CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG 
ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC 
CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG 
AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG 
AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG 
TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA 
GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA 
AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA 
TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT 
GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC 
TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA 
CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC 
CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT 
AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC 
AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA 
CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT 
CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC 
AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC 
TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA 
GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT 
GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG 
AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT 
AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT 
CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC 
AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC 
AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG 
GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA 
GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG 
TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT 
GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC 
TCAGGCTACA ATGAAAAGGG GGACCCTGAG TGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa02369
Clone ID Related Accession (Same CDS sequence) NM_001106859.1
Accession Version NM_001106859.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2355bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2017-10-01
Organism Rattus norvegicus(Norway rat)
Product ATR-interacting protein
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473954.2. On or before Oct 4, 2007 this sequence version replaced XM_001076248.1, XM_001055797.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC 
CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG 
ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC 
CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG 
AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG 
AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG 
TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA 
GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA 
AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA 
TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT 
GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC 
TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA 
CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC 
CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT 
AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC 
AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA 
CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT 
CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC 
AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC 
TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA 
GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT 
GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG 
AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT 
AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT 
CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC 
AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC 
AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG 
GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA 
GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG 
TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT 
GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC 
TCAGAAGGCT GCCTTCTCCT GAGGCTGTAC ATGTACATTA CATCAAGGCC TGACAAAACG 
GCCTCAGAGA CACAGTGGCT TCAGCTGGAA CAAGAGGTAG TGTGGCTCTT GGCCAAGCTG 
AGTGTGCAGA GCCCTTCCCC CGCTGGCATT GTTTCTGACT GTCAGTGCAA TGTAGAGGCA 
GTCAGAGCAC TCACTGTGAT GTTGCACAGG CAATGGCTGA CTGTGCGGCG GGCAGGGGGT 
CCAAGGACCC ACCAGCAGAA GCAGACGGTC CGCTGTCTGC GGGACACTGT GCTGCTGCTG 
CACAGCCTAT CTCAGAAGGA CAAGCTCTTT ACTGTGCACT GTGTCGAGGT CCTGCATCAG 
TACGACCAGG TGATGCCAGG GGTCAGCATG CTGATTCGAG CCCTTCCTGA TGTGACTGAC 
TGTGAAGAGG CTGCCCTGGA TGACCTCTGT GCTGCAGAGA CAGATTTGGA AGACGCCGAG 
ATGGACTGTA GCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001100329.1
CDS108..2462
Translation

Target ORF information:

RefSeq Version NM_001106859.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus ATR interacting protein (Atrip), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001106859.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC 
CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG 
ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC 
CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG 
AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG 
AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG 
TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA 
GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA 
AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA 
TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT 
GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC 
TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA 
CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC 
CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT 
AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC 
AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA 
CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT 
CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC 
AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC 
TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA 
GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT 
GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG 
AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT 
AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT 
CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC 
AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC 
AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG 
GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA 
GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG 
TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT 
GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC 
TCAGAAGGCT GCCTTCTCCT GAGGCTGTAC ATGTACATTA CATCAAGGCC TGACAAAACG 
GCCTCAGAGA CACAGTGGCT TCAGCTGGAA CAAGAGGTAG TGTGGCTCTT GGCCAAGCTG 
AGTGTGCAGA GCCCTTCCCC CGCTGGCATT GTTTCTGACT GTCAGTGCAA TGTAGAGGCA 
GTCAGAGCAC TCACTGTGAT GTTGCACAGG CAATGGCTGA CTGTGCGGCG GGCAGGGGGT 
CCAAGGACCC ACCAGCAGAA GCAGACGGTC CGCTGTCTGC GGGACACTGT GCTGCTGCTG 
CACAGCCTAT CTCAGAAGGA CAAGCTCTTT ACTGTGCACT GTGTCGAGGT CCTGCATCAG 
TACGACCAGG TGATGCCAGG GGTCAGCATG CTGATTCGAG CCCTTCCTGA TGTGACTGAC 
TGTGAAGAGG CTGCCCTGGA TGACCTCTGT GCTGCAGAGA CAGATTTGGA AGACGCCGAG 
ATGGACTGTA GCTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

CloneID ORa31573
Clone ID Related Accession (Same CDS sequence) XM_006243766.3
Accession Version XM_006243766.3 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 2067bp)
Protein sequence
SNP
Vector pcDNA3.1+/C-(K)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2016-07-25
Organism Rattus norvegicus(Norway rat)
Product ATR-interacting protein isoform X1
Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005107.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006243766.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC 
CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG 
ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC 
CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG 
AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG 
AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG 
TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA 
GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA 
AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA 
TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT 
GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC 
TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA 
CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC 
CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT 
AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC 
AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA 
CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT 
CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC 
AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC 
TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA 
GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT 
GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG 
AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT 
AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT 
CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC 
AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC 
AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG 
GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA 
GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG 
TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT 
GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC 
TCAGAAGGCT GCCTTCTCCT GAGGCTGTAC ATGTACATTA CATCAAGGCC TGACAAAACG 
GCCTCAGAGA CACAGTGGCT TCAGCTGGAA CAAGAGATGC AATACAAGTG CATCCTGGGT 
TGCAGTGGTG CTCAGCAGAG TTGCCTGATC ATGCTGCCTG GGGCTTGGGG CCTGATCCTG 
GTCCTGGAAG CAGTGAGCTG TTGGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq XP_006243828.1
CDS107..2173
Translation

Target ORF information:

RefSeq Version XM_006243766.3
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus ATR interacting protein (Atrip), transcript variant X2, mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 XM_006243766.3

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
ATGGCCGGGA CTCCCGCACC GAACAGCCAC AGGAAGCAGA GTGGCGGCCT GGAGCCTTTC 
CTCGGTCTGT CTCGGTCCAT CGAGAACCCT CCGAGCAAGC GGGCCCGGAG CTTCTCTGAG 
ACCACAGTTC CGGACCCCGA AGACCCATTC GGCGAGCACG CGGAATTTAC TGCGGACGAC 
CTAGAGGAAC TGGACATCCT CGCGTCACAG GCCCTGAGCC AGTGTCCGGT CGCGCCTCCG 
AACCTGTCCT GTGCTCATAA GGTCCGTCGA CTAGATGGGT TACCAAATAG TCCTATAAGG 
AAAAACAGAG AAGATATTCC AGTTAAAGAT AACTTTGAAC TAGAAGTACT TCAGATACAG 
TACAGAGAAC TTAAAGAAAA GCTGAAAGCA ATGGAAGAAG AAATCCTAAT TAAGAATGGA 
GAAATTAAAA TTTTGCGTGA CTCACTGCAT CAGACAGAAT CCGTTCTAGA AGAACAGAAA 
AGATCACATT TTCTTCTTGA GCAAGAAAAG ACTCAAGCAC TCAGTGAAAA GGAAAAGGAA 
TTCTCCAAAA AGCTCCAATC ACTGCAGTCT GAACTCCAGT TTAAAGATGC AGAAATGAAT 
GAATTAAGGA CAAAGCTTCA GAGCAACGAA CGAACAAATA AACTAACCAT TCCGTCAGTC 
TCCCAAGTCA GTCCTAGGAA AGGCTCTTCT GTGGTTGTAA AGTCAGAAGC ATGTTCTCCA 
CATGTTGGAA AAACAACTTT CCCTACAAAG GAGTCTTTTA GTGCTAACAC GCCTCTCTTC 
CACCCCTGTC AGACTGAGGC AGGACACAAA TTTCTGGTGG GCCAAGAGGT TTCGGATAAT 
AAAGCCCATG TGGGAGGTAA CCTCCTGAAG CAAGACGTGC AGCAGAAAAT TCTCACTGAC 
AGCTGGGTAC AGAGAAAAAA CACTCAAGGT TCTATCTTGA TAAACTTGCT CCTGAAGCAA 
CCTTTGGTGC CAGGGTCATC TCTAGGTCTT TGTCACCTTC TGAGCAGTGG AGCTGAGGTT 
CCCACTGGCC CCATCTTGCA GCCAGCAGGG CTCAGTACTT TGCCTGGGAC TTCAGGCCTC 
AGGACCATCA GCTCTTCTGA TGGGCCATTT TCCCCCTCTG CCCTGAGAGA AGCACAGAAC 
TTGGCATTCA CTGGATTAAA TCTGGTTGCC AGGAGTGAGA GCTCACATGA CGGAGATGTA 
GCAGGCAGAA GAGTCTTCCC ACTCTGCCAG CTTCCTGGAG CTGTGCATAT CCTCCCTCTT 
GTACAGTTCT TCATTGGCTT ACACTGCCAG GCTCTACAAG ACTTAACCCC AGCTAAGAAG 
AACGGGGCAC CTGGGGCCTC TCCGACAGAC ACCTCCCACA TGAGCTCTGG GGTAGAGGCT 
AGCCCAGAGG ACTCCGTTTG TAGCTTGGAA AGTACTTCTG TGGCTTCGCT CAGCGTCCTT 
CAGCACCTGG TGTGCCACAG TGGGGCAGTG GTCTGCCTGT TACTGTCAGG CATGGGGACC 
AATGCTGCTG CCCGGGAAGG AGACTTAAGT CAGACTTGTG CAGATACAGT CTCAGCCTCC 
AGGGAAGACG CTCATGGCCA AAACCAGCAC CCACTATTGA AGATGCTTCT TCAGCTGATG 
GCGTTCTCTT CTACAACATC AGGTCAATTT CAAGCCAGTG TCCTGAGCCA GTGCCTCAAA 
GTTTTGGTGA AGTTAGCTGA AAACGCTTCC TCTGATTTGT TGCCCAGGTT CTCCTTCGTG 
TTCCCGATGT TGCCACAGTG CCTCTGCTCA GAGCTGCCAC TGTCGTGTGT GCTGCTGGCT 
GTCGAGCTGC TCTCTGTTCT GGTGGACCAG GACAGCCTAG CACAGCAGCT GTGCTCCCAC 
TCAGAAGGCT GCCTTCTCCT GAGGCTGTAC ATGTACATTA CATCAAGGCC TGACAAAACG 
GCCTCAGAGA CACAGTGGCT TCAGCTGGAA CAAGAGATGC AATACAAGTG CATCCTGGGT 
TGCAGTGGTG CTCAGCAGAG TTGCCTGATC ATGCTGCCTG GGGCTTGGGG CCTGATCCTG 
GTCCTGGAAG CAGTGAGCTG TTGGTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.
Molecular cell53(2)235-246(2014 Jan)
Mar?chal A,Li JM,Ji XY,Wu CS,Yazinski SA,Nguyen HD,Liu S,Jim?nez AE,Jin J,Zou L


book

ATR-Chk2 signaling in p53 activation and DNA damage response during cisplatin-induced apoptosis.
The Journal of biological chemistry283(10)6572-83(2008 Mar)
Pabla N,Huang S,Mi QS,Daniel R,Dong Z


book

ATR and ATRIP: partners in checkpoint signaling.
Science (New York, N.Y.)294(5547)1713-6(2001 Nov)
Cortez D,Guntuku S,Qin J,Elledge SJ