Gene Symbol | Slfn13 |
Entrez Gene ID | 303378 |
Full Name | schlafen family member 13 |
Synonyms | Slfn8 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Slfn13 cDNA ORF clone
gRNAs
Gene Symbol | Slfn13 |
Entrez Gene ID | 303378 |
Full Name | schlafen family member 13 |
Synonyms | Slfn8 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_008768029.2 | XP_008766251.1 | schlafen family member 11 isoform X2 |
XM_006246999.3 | XP_006247061.1 | schlafen family member 11 isoform X2 |
XM_006247000.3 | XP_006247062.1 | schlafen family member 11 isoform X3 |
XM_008768031.2 | XP_008766253.1 | schlafen family member 11 isoform X2 |
XM_008768027.2 | XP_008766249.1 | schlafen family member 11 isoform X1 |
NM_001013970.1 | NP_001013992.1 | schlafen family member 13 |
XM_006246998.3 | XP_006247060.1 | schlafen family member 11 isoform X1 |
XM_008768032.2 | XP_008766254.1 | schlafen family member 11 isoform X2 |
XM_008768030.1 | XP_008766252.1 | schlafen family member 11 isoform X2 |
Codon-usage-based inhibition of HIV protein synthesis by human schlafen 11.
Li M, Kao E, Gao X, Sandig H, Limmer K, Pavon-Eternod M, Jones TE, Landry S, Pan T, Weitzman MD, David M
Nature491(7422)125-8(2012 Nov)
Putative DNA/RNA helicase Schlafen-11 (SLFN11) sensitizes cancer cells to DNA-damaging agents.
Zoppoli G, Regairaz M, Leo E, Reinhold WC, Varma S, Ballestrero A, Doroshow JH, Pommier Y
Proceedings of the National Academy of Sciences of the United States of America109(37)15030-5(2012 Sep)
Subcellular localization of the Schlafen protein family.
Neumann B, Zhao L, Murphy K, Gonda TJ
Biochemical and biophysical research communications370(1)62-6(2008 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Slfn13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Slfn13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa04482 | |
Clone ID Related Accession (Same CDS sequence) | XM_008768029.2 , XM_006246999.3 , XM_008768031.2 , NM_001013970.1 , XM_008768032.2 , XM_008768030.1 | |
Accession Version | NM_001013970.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2724bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-18 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | schlafen family member 13 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC085777.1. On Apr 20, 2005 this sequence version replaced XM_220776.3. ##Evidence-Data-START## Transcript exon combination :: BC085777.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01906349 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001013992.1 |
CDS | 131..2854 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa04482 | |
Clone ID Related Accession (Same CDS sequence) | XM_008768029.2 , XM_006246999.3 , XM_008768031.2 , NM_001013970.1 , XM_008768032.2 , XM_008768030.1 | |
Accession Version | XM_008768029.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2724bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | schlafen family member 11 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008768029.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008766251.1 |
CDS | 729..3452 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa04482 | |
Clone ID Related Accession (Same CDS sequence) | XM_008768029.2 , XM_006246999.3 , XM_008768031.2 , NM_001013970.1 , XM_008768032.2 , XM_008768030.1 | |
Accession Version | XM_006246999.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2724bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | schlafen family member 11 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006246999.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006247061.1 |
CDS | 574..3297 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa04482 | |
Clone ID Related Accession (Same CDS sequence) | XM_008768029.2 , XM_006246999.3 , XM_008768031.2 , NM_001013970.1 , XM_008768032.2 , XM_008768030.1 | |
Accession Version | XM_008768031.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2724bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | schlafen family member 11 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008768031.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008766253.1 |
CDS | 1003..3726 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa04482 | |
Clone ID Related Accession (Same CDS sequence) | XM_008768029.2 , XM_006246999.3 , XM_008768031.2 , NM_001013970.1 , XM_008768032.2 , XM_008768030.1 | |
Accession Version | XM_008768032.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2724bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | schlafen family member 11 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008768032.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008766254.1 |
CDS | 800..3523 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa04482 | |
Clone ID Related Accession (Same CDS sequence) | XM_008768029.2 , XM_006246999.3 , XM_008768031.2 , NM_001013970.1 , XM_008768032.2 , XM_008768030.1 | |
Accession Version | XM_008768030.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2724bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | schlafen family member 11 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008766252.1 |
CDS | 1112..3835 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAAATTC ATCCCTCCTT AGTGGTGGAA CCGTCTTACC CAGACTTGAT CATCCATGCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa33514 | |
Clone ID Related Accession (Same CDS sequence) | XM_006247000.3 | |
Accession Version | XM_006247000.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2628bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | schlafen family member 11 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006247000.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACTCGA AGAAGAAGAG ACTGGAGAAA GCAAGAATCA CAGAGGCTGC TTGTGCTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006247062.1 |
CDS | 757..3384 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGACTCGA AGAAGAAGAG ACTGGAGAAA GCAAGAATCA CAGAGGCTGC TTGTGCTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa33513 | |
Clone ID Related Accession (Same CDS sequence) | XM_008768027.2 , XM_006246998.3 | |
Accession Version | XM_008768027.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2754bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | schlafen family member 11 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008768027.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTGGAT TGTTTGGCTG TAGGGTCAGC ATGGAAATTC ATCCCTCCTT AGTGGTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008766249.1 |
CDS | 1401..4154 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTTGGAT TGTTTGGCTG TAGGGTCAGC ATGGAAATTC ATCCCTCCTT AGTGGTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa33513 | |
Clone ID Related Accession (Same CDS sequence) | XM_008768027.2 , XM_006246998.3 | |
Accession Version | XM_006246998.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2754bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | schlafen family member 11 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006246998.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTGGAT TGTTTGGCTG TAGGGTCAGC ATGGAAATTC ATCCCTCCTT AGTGGTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006247060.1 |
CDS | 1017..3770 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTTGGAT TGTTTGGCTG TAGGGTCAGC ATGGAAATTC ATCCCTCCTT AGTGGTGGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Codon-usage-based inhibition of HIV protein synthesis by human schlafen 11. |
Putative DNA/RNA helicase Schlafen-11 (SLFN11) sensitizes cancer cells to DNA-damaging agents. |
Subcellular localization of the Schlafen protein family. |