Gene Symbol | Tctn1 |
Entrez Gene ID | 304486 |
Full Name | tectonic family member 1 |
Synonyms | RGD1566266 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Tctn1 cDNA ORF clone
Gene Symbol | Tctn1 |
Entrez Gene ID | 304486 |
Full Name | tectonic family member 1 |
Synonyms | RGD1566266 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017598330.1 | XP_017453819.1 | tectonic-1 isoform X1 |
XM_017598333.1 | XP_017453822.1 | tectonic-1 isoform X3 |
NM_001177613.1 | NP_001171084.1 | tectonic-1 precursor |
XM_017598329.1 | XP_017453818.1 | tectonic-1 isoform X1 |
XM_017598331.1 | XP_017453820.1 | tectonic-1 isoform X1 |
XM_017598332.1 | XP_017453821.1 | tectonic-1 isoform X2 |
Mus musculus (house mouse) | Tctn1 | NP_001034242.2 |
Rattus norvegicus (Norway rat) | Tctn1 | NP_001171084.1 |
Danio rerio (zebrafish) | tctn1 | XP_001920842.4 |
Homo sapiens (human) | TCTN1 | NP_001076007.1 |
Gallus gallus (chicken) | TCTN1 | XP_415162.3 |
TCTN1 | XP_001099978.2 | |
Xenopus tropicalis (tropical clawed frog) | tctn1 | NP_001120638.1 |
Pan troglodytes (chimpanzee) | TCTN1 | XP_003313991.1 |
Canis lupus familiaris (dog) | TCTN1 | XP_005636285.1 |
Bos taurus (cattle) | TCTN1 | NP_001039521.2 |
MKS5 and CEP290 Dependent Assembly Pathway of the Ciliary Transition Zone.
Li C, Jensen VL, Park K, Kennedy J, Garcia-Gonzalo FR, Romani M, De Mori R, Bruel AL, Gaillard D, Doray B, Lopez E, Rivi?re JB, Faivre L, Thauvin-Robinet C, Reiter JF, Blacque OE, Valente EM, Leroux MR
PLoS biology14(3)e1002416(2016 Mar)
A ciliopathy complex at the transition zone protects the cilia as a privileged membrane domain.
Chih B, Liu P, Chinn Y, Chalouni C, Komuves LG, Hass PE, Sandoval W, Peterson AS
Nature cell biology14(1)61-72(2011 Dec)
A transition zone complex regulates mammalian ciliogenesis and ciliary membrane composition.
Garcia-Gonzalo FR, Corbit KC, Sirerol-Piquer MS, Ramaswami G, Otto EA, Noriega TR, Seol AD, Robinson JF, Bennett CL, Josifova DJ, Garc?a-Verdugo JM, Katsanis N, Hildebrandt F, Reiter JF
Nature genetics43(8)776-84(2011 Jul)
Tectonic, a novel regulator of the Hedgehog pathway required for both activation and inhibition.
Reiter JF, Skarnes WC
Genes & development20(1)22-7(2006 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Tctn1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tctn1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa40908 | |
Clone ID Related Accession (Same CDS sequence) | NM_001177613.1 | |
Accession Version | NM_001177613.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1782bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-02 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | tectonic-1 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AC127875.3. On or before May 13, 2010 this sequence version replaced XR_009299.2, XR_085992.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence. The genomic coordinates used for the transcript record were based on transcript alignments and orthologous data. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001171084.1 |
CDS | 91..1872 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001177613.1 |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa57811 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598330.1 , XM_017598329.1 , XM_017598331.1 | |
Accession Version | XM_017598330.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1908bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | tectonic-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453819.1 |
CDS | 107..2014 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598330.1 |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa57811 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598330.1 , XM_017598329.1 , XM_017598331.1 | |
Accession Version | XM_017598329.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1908bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | tectonic-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453818.1 |
CDS | 107..2014 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598329.1 |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa57811 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598330.1 , XM_017598329.1 , XM_017598331.1 | |
Accession Version | XM_017598331.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1908bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | tectonic-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453820.1 |
CDS | 108..2015 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598331.1 |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa57812 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598332.1 | |
Accession Version | XM_017598332.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1866bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | tectonic-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453821.1 |
CDS | 108..1973 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598332.1 |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa57813 | |
Clone ID Related Accession (Same CDS sequence) | XM_017598333.1 | |
Accession Version | XM_017598333.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1824bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | tectonic-1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005111.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017453822.1 |
CDS | 108..1931 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017598333.1 |
1 | ATGGGGTCGC GGTGTCTTCC GCCGCTCCTG CTGGTGCTCC TAAACTGCTG CACCTCTTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
MKS5 and CEP290 Dependent Assembly Pathway of the Ciliary Transition Zone. |
A ciliopathy complex at the transition zone protects the cilia as a privileged membrane domain. |
A transition zone complex regulates mammalian ciliogenesis and ciliary membrane composition. |
Tectonic, a novel regulator of the Hedgehog pathway required for both activation and inhibition. |