Gene Symbol | Tenm3 |
Entrez Gene ID | 306451 |
Full Name | teneurin transmembrane protein 3 |
Synonyms | Odz3 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Tenm3 cDNA ORF clone
Gene Symbol | Tenm3 |
Entrez Gene ID | 306451 |
Full Name | teneurin transmembrane protein 3 |
Synonyms | Odz3 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017600112.1 | XP_017455601.1 | teneurin-3 isoform X6 |
XM_017600113.1 | XP_017455602.1 | teneurin-3 isoform X7 |
NM_001169133.2 | NP_001162604.1 | teneurin-3 |
XM_008771245.1 | XP_008769467.1 | teneurin-3 isoform X2 |
XM_008771244.2 | XP_008769466.1 | teneurin-3 isoform X1 |
XM_017600111.1 | XP_017455600.1 | teneurin-3 isoform X4 |
XM_006253115.2 | XP_006253177.1 | teneurin-3 isoform X5 |
XM_017600110.1 | XP_017455599.1 | teneurin-3 isoform X3 |
Rattus norvegicus (Norway rat) | Tenm3 | NP_001162604.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP000461 | XP_310633.5 |
Bos taurus (cattle) | ODZ3 | XP_003587993.2 |
Gallus gallus (chicken) | ODZ3 | NP_001185466.1 |
Homo sapiens (human) | TENM3 | NP_001073946.1 |
Pan troglodytes (chimpanzee) | ODZ3 | XP_001160536.1 |
ODZ3 | XP_001091761.1 | |
Danio rerio (zebrafish) | tenm3 | NP_571043.1 |
Canis lupus familiaris (dog) | TENM3 | XP_005630073.1 |
Mus musculus (house mouse) | Tenm3 | NP_001139409.1 |
Drosophila melanogaster (fruit fly) | Ten-a | NP_001245641.1 |
Homozygous null mutation in ODZ3 causes microphthalmia in humans.
Aldahmesh MA, Mohammed JY, Al-Hazzaa S, Alkuraya FS
Genetics in medicine : official journal of the American College of Medical Genetics14(11)900-4(2012 Nov)
Ten-m3 is required for the development of topography in the ipsilateral retinocollicular pathway.
Dharmaratne N, Glendining KA, Young TR, Tran H, Sawatari A, Leamey CA
PloS one7(9)e43083(2012)
Differential gene expression between sensory neocortical areas: potential roles for Ten_m3 and Bcl6 in patterning visual and somatosensory pathways.
Leamey CA, Glendining KA, Kreiman G, Kang ND, Wang KH, Fassler R, Sawatari A, Tonegawa S, Sur M
Cerebral cortex (New York, N.Y. : 1991)18(1)53-66(2008 Jan)
Ten_m3 regulates eye-specific patterning in the mammalian visual pathway and is required for binocular vision.
Leamey CA, Merlin S, Lattouf P, Sawatari A, Zhou X, Demel N, Glendining KA, Oohashi T, Sur M, F?ssler R
PLoS biology5(9)e241(2007 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Tenm3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tenm3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa12971 | |
Clone ID Related Accession (Same CDS sequence) | NM_001169133.2 | |
Accession Version | NM_001169133.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 8145bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-18 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | teneurin-3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07025693.1, AABR07025695.1, AABR07025701.1, AABR07025702.1, AABR07025704.1 and AABR07025705.1. On Apr 25, 2014 this sequence version replaced NM_001169133.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001162604.1 |
CDS | 50..8194 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001169133.2 |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa37359 | |
Clone ID Related Accession (Same CDS sequence) | XM_008771244.2 | |
Accession Version | XM_008771244.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 8166bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | teneurin-3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008771244.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008769466.1 |
CDS | 195..8360 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008771244.2 |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa37362 | |
Clone ID Related Accession (Same CDS sequence) | XM_006253115.2 | |
Accession Version | XM_006253115.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 8097bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | teneurin-3 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006253115.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006253177.1 |
CDS | 82..8178 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006253115.2 |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa46408 | |
Clone ID Related Accession (Same CDS sequence) | XM_008771245.1 | |
Accession Version | XM_008771245.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 8163bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | teneurin-3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008769467.1 |
CDS | 82..8244 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008771245.1 |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58808 | |
Clone ID Related Accession (Same CDS sequence) | XM_017600110.1 | |
Accession Version | XM_017600110.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 8145bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | teneurin-3 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017455599.1 |
CDS | 82..8226 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017600110.1 |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58809 | |
Clone ID Related Accession (Same CDS sequence) | XM_017600111.1 | |
Accession Version | XM_017600111.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 8118bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | teneurin-3 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017455600.1 |
CDS | 82..8199 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017600111.1 |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58810 | |
Clone ID Related Accession (Same CDS sequence) | XM_017600112.1 | |
Accession Version | XM_017600112.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7887bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | teneurin-3 isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017455601.1 |
CDS | 82..7968 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017600112.1 |
1 | ATGGATGTGA AGGAACGCAG GCCTTACTGC TCCTTGACCA AGAGCAGACG GGAAAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58811 | |
Clone ID Related Accession (Same CDS sequence) | XM_017600113.1 | |
Accession Version | XM_017600113.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7803bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | teneurin-3 isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAATC TCTCGCTCAT AGCTTCTCAA CAAGCATTGT ACACATACCT TTATATTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017455602.1 |
CDS | 277..8079 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017600113.1 |
1 | ATGTCCAATC TCTCGCTCAT AGCTTCTCAA CAAGCATTGT ACACATACCT TTATATTTTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Homozygous null mutation in ODZ3 causes microphthalmia in humans. |
Ten-m3 is required for the development of topography in the ipsilateral retinocollicular pathway. |
Differential gene expression between sensory neocortical areas: potential roles for Ten_m3 and Bcl6 in patterning visual and somatosensory pathways. |
Ten_m3 regulates eye-specific patterning in the mammalian visual pathway and is required for binocular vision. |