Gene Symbol | Ank1 |
Entrez Gene ID | 306570 |
Full Name | ankyrin 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Ank1 cDNA ORF clone
Gene Symbol | Ank1 |
Entrez Gene ID | 306570 |
Full Name | ankyrin 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017600148.1 | XP_017455637.1 | ankyrin-1 isoform X4 |
XM_008771358.2 | XP_008769580.1 | ankyrin-1 isoform X5 |
XM_008771356.2 | XP_008769578.2 | ankyrin-1 isoform X1 |
XM_008771357.2 | XP_008769579.2 | ankyrin-1 isoform X2 |
XM_008771359.2 | XP_008769581.1 | ankyrin-1 isoform X3 |
NM_001107322.2 | NP_001100792.1 | ankyrin-1 |
Canis lupus familiaris (dog) | ANK1 | XP_005629869.1 |
Bos taurus (cattle) | ANK1 | XP_002698771.3 |
Mus musculus (house mouse) | Ank1 | NP_001104253.1 |
Homo sapiens (human) | ANK1 | NP_001135918.1 |
Rattus norvegicus (Norway rat) | Ank1 | NP_001100792.1 |
Pan troglodytes (chimpanzee) | ANK1 | XP_003311743.1 |
ANK1 | XP_001099591.2 | |
Gallus gallus (chicken) | ANK1 | XP_424401.4 |
Danio rerio (zebrafish) | si:ch211-263m18.3 | XP_005161295.1 |
Identification of Small Ankyrin 1 as a Novel Sarco(endo)plasmic Reticulum Ca2+-ATPase 1 (SERCA1) Regulatory Protein in Skeletal Muscle.
Desmond PF, Muriel J, Markwardt ML, Rizzo MA, Bloch RJ
The Journal of biological chemistry290(46)27854-67(2015 Nov)
A deep intronic mutation in the ankyrin-1 gene causes diminished protein expression resulting in hemolytic anemia in mice.
Huang H, Zhao P, Arimatsu K, Tabeta K, Yamazaki K, Krieg L, Fu E, Zhang T, Du X
G3 (Bethesda, Md.)3(10)1687-95(2013 Oct)
Suppression of hepcidin expression and iron overload mediate Salmonella susceptibility in ankyrin 1 ENU-induced mutant.
Yuki KE, Eva MM, Richer E, Chung D, Paquet M, Cellier M, Canonne-Hergaux F, Vaulont S, Vidal SM, Malo D
PloS one8(2)e55331(2013)
Hydrophobic residues in small ankyrin 1 participate in binding to obscurin.
Willis CD, Oashi T, Busby B, Mackerell AD Jr, Bloch RJ
Molecular membrane biology29(2)36-51(2012 Mar)
Integrity of the network sarcoplasmic reticulum in skeletal muscle requires small ankyrin 1.
Ackermann MA, Ziman AP, Strong J, Zhang Y, Hartford AK, Ward CW, Randall WR, Kontrogianni-Konstantopoulos A, Bloch RJ
Journal of cell science124(Pt 21)3619-30(2011 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
these results suggest that sAnk1 interacts with SERCA1 through its TM and cytoplasmic domains to regulate SERCA1 activity and modulate sequestration of Ca(2+) in the sarcoplasmic reticulum lumen.
Title: Identification of Small Ankyrin 1 as a Novel Sarco(endo)plasmic Reticulum Ca2+-ATPase 1 (SERCA1) Regulatory Protein in Skeletal Muscle.
Site-directed mutagenesis, blot overlays and surface plasmon resonance assays were used to study the contribution of the hydrophobic residues, V70, F71, I102 and I103 of small ankyrin-1 (sAnk1), to two different 30-mers of obscurin that bind sAnk1.
Title: Hydrophobic residues in small ankyrin 1 participate in binding to obscurin.
Ank1 stabilizes the network sarcoplasmic reticulum in skeletal muscl.
Title: Integrity of the network sarcoplasmic reticulum in skeletal muscle requires small ankyrin 1.
Obscurin and ank1.5 localization in developing rat diaphragm
Title: Localization of ank1.5 in the sarcoplasmic reticulum precedes that of SERCA and RyR: relationship with the organization of obscurin in developing sarcomeres.
The following Ank1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ank1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa58833 | |
Clone ID Related Accession (Same CDS sequence) | XM_008771356.2 | |
Accession Version | XM_008771356.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4473bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | ankyrin-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008771356.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGGCGC CGCCCTGCAC CCTGGTCCCC GATAAGGCCT TTTCTAGTTG CAGGGTAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008769578.2 |
CDS | 16..4488 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008771356.2 |
1 | ATGCAGGCGC CGCCCTGCAC CCTGGTCCCC GATAAGGCCT TTTCTAGTTG CAGGGTAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58834 | |
Clone ID Related Accession (Same CDS sequence) | XM_008771357.2 | |
Accession Version | XM_008771357.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4449bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | ankyrin-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008771357.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCAGGCGC CGCCCTGCAC CCTGGTCCCC GATAAGGCCT TTTCTAGTTG CAGGGTAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008769579.2 |
CDS | 16..4464 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008771357.2 |
1 | ATGCAGGCGC CGCCCTGCAC CCTGGTCCCC GATAAGGCCT TTTCTAGTTG CAGGGTAGTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58835 | |
Clone ID Related Accession (Same CDS sequence) | XM_017600148.1 | |
Accession Version | XM_017600148.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | ankyrin-1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCAGG CGGCCAAACA GCTGAAGAAA ATCAAAGACA TCGAGGCGCA GGCCCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017455637.1 |
CDS | 166..4572 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017600148.1 |
1 | ATGGCTCAGG CGGCCAAACA GCTGAAGAAA ATCAAAGACA TCGAGGCGCA GGCCCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa05288 | |
Clone ID Related Accession (Same CDS sequence) | NM_001107322.2 | |
Accession Version | NM_001107322.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5124bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-18 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | ankyrin-1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473970.2. On Mar 3, 2011 this sequence version replaced NM_001107322.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN01906351, SAMN01906353 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCAGAAC GGCCGCGCAG GTCGGGGTCA GACCCCGCGG CCGATGCTGC TACCAGCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001100792.1 |
CDS | 1..5124 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107322.2 |
1 | ATGGCAGAAC GGCCGCGCAG GTCGGGGTCA GACCCCGCGG CCGATGCTGC TACCAGCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa46426 | |
Clone ID Related Accession (Same CDS sequence) | XM_008771358.2 | |
Accession Version | XM_008771358.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4344bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | ankyrin-1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008771358.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGAAC GGCCGCGCAG GTCGGGGTCA GACCCCGCGG CCGATGCTGC TACCAGCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008769580.1 |
CDS | 1315..5658 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008771358.2 |
1 | ATGGCAGAAC GGCCGCGCAG GTCGGGGTCA GACCCCGCGG CCGATGCTGC TACCAGCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa46427 | |
Clone ID Related Accession (Same CDS sequence) | XM_008771359.2 | |
Accession Version | XM_008771359.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4431bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | ankyrin-1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005115.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008771359.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCAGG CGGCCAAACA GCTGAAGAAA ATCAAAGACA TCGAGGCGCA GGCCCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008769581.1 |
CDS | 167..4597 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008771359.2 |
1 | ATGGCTCAGG CGGCCAAACA GCTGAAGAAA ATCAAAGACA TCGAGGCGCA GGCCCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Identification of Small Ankyrin 1 as a Novel Sarco(endo)plasmic Reticulum Ca2+-ATPase 1 (SERCA1) Regulatory Protein in Skeletal Muscle. |
A deep intronic mutation in the ankyrin-1 gene causes diminished protein expression resulting in hemolytic anemia in mice. |
Suppression of hepcidin expression and iron overload mediate Salmonella susceptibility in ankyrin 1 ENU-induced mutant. |
Hydrophobic residues in small ankyrin 1 participate in binding to obscurin. |
Integrity of the network sarcoplasmic reticulum in skeletal muscle requires small ankyrin 1. |