Gene Symbol | Chd1 |
Entrez Gene ID | 308215 |
Full Name | chromodomain helicase DNA binding protein 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Chd1 cDNA ORF clone
Gene Symbol | Chd1 |
Entrez Gene ID | 308215 |
Full Name | chromodomain helicase DNA binding protein 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001107465.1 | NP_001100935.1 | chromodomain-helicase-DNA-binding protein 1 |
Pan troglodytes (chimpanzee) | CHD1 | XP_517850.2 |
CHD1 | XP_001097125.1 | |
Mus musculus (house mouse) | Chd1 | NP_031716.2 |
Eremothecium gossypii | AGOS_AGR123C | NP_986789.1 |
Rattus norvegicus (Norway rat) | Chd1 | NP_001100935.1 |
Danio rerio (zebrafish) | zgc:173506 | NP_001121770.2 |
Saccharomyces cerevisiae (baker's yeast) | CHD1 | NP_011091.1 |
Schizosaccharomyces pombe (fission yeast) | hrp3 | NP_594967.1 |
Homo sapiens (human) | CHD1 | NP_001261.2 |
Canis lupus familiaris (dog) | CHD1 | XP_848459.1 |
Gallus gallus (chicken) | CHD1 | NP_990272.1 |
Kluyveromyces lactis | KLLA0C17578g | XP_452985.1 |
Schizosaccharomyces pombe (fission yeast) | hrp1 | NP_593660.1 |
Bos taurus (cattle) | CHD1 | NP_001178977.1 |
Missense variants in the chromatin remodeler
Pilarowski GO, Vernon HJ, Applegate CD, Boukas L, Cho MT, Gurnett CA, Benke PJ, Beaver E, Heeley JM, Medne L, Krantz ID, Azage M, Niyazov D, Henderson LB, Wentzensen IM, Baskin B, Sacoto MJG, Bowman GD, Bjornsson HT
Journal of medical genetics(2017 Sep)
CHD1 and CHD2 are positive regulators of HIV-1 gene expression.
Rodgers MJ, Banks DJ, Bradley KA, Young JA
Virology journal11180(2014 Oct)
Readout of epigenetic modifications.
Patel DJ, Wang Z
Annual review of biochemistry8281-118(2013)
Recurrent deletion of CHD1 in prostate cancer with relevance to cell invasiveness.
Huang S, Gulzar ZG, Salari K, Lapointe J, Brooks JD, Pollack JR
Oncogene31(37)4164-70(2012 Sep)
The mutational landscape of lethal castration-resistant prostate cancer.
Grasso CS, Wu YM, Robinson DR, Cao X, Dhanasekaran SM, Khan AP, Quist MJ, Jing X, Lonigro RJ, Brenner JC, Asangani IA, Ateeq B, Chun SY, Siddiqui J, Sam L, Anstett M, Mehra R, Prensner JR, Palanisamy N, Ryslik GA, Vandin F, Raphael BJ, Kunju LP, Rhodes DR, Pienta KJ, Chinnaiyan AM, Tomlins SA
Nature487(7406)239-43(2012 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Chd1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Chd1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa03610 | |
Clone ID Related Accession (Same CDS sequence) | NM_001107465.1 | |
Accession Version | NM_001107465.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5136bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-02-04 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | chromodomain-helicase-DNA-binding protein 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474033.2. On or before Oct 4, 2007 this sequence version replaced XM_001056703.1, XM_238731.4. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGAATGGAC ACAGTGATGA AGAAAGTGTT AGAAATGGCA GCGGAGAATC AAGTCAGTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001100935.1 |
CDS | 156..5291 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107465.1 |
1 | ATGAATGGAC ACAGTGATGA AGAAAGTGTT AGAAATGGCA GCGGAGAATC AAGTCAGTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Missense variants in the chromatin remodeler |
CHD1 and CHD2 are positive regulators of HIV-1 gene expression. |
Readout of epigenetic modifications. |
Recurrent deletion of CHD1 in prostate cancer with relevance to cell invasiveness. |
The mutational landscape of lethal castration-resistant prostate cancer. |