Gene Symbol | Exosc5 |
Entrez Gene ID | 308441 |
Full Name | exosome component 5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Exosc5 cDNA ORF clone
Gene Symbol | Exosc5 |
Entrez Gene ID | 308441 |
Full Name | exosome component 5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006228437.3 | XP_006228499.1 | exosome complex component RRP46 isoform X1 |
NM_001107493.2 | NP_001100963.2 | exosome complex component RRP46 |
Pan troglodytes (chimpanzee) | EXOSC5 | XP_001152170.1 |
EXOSC5 | XP_001102687.2 | |
Gallus gallus (chicken) | EXOSC5 | XP_003643513.1 |
Oryza sativa (rice) | Os03g0854200 | NP_001051936.1 |
Xenopus tropicalis (tropical clawed frog) | exosc5 | XP_002939437.2 |
Mus musculus (house mouse) | Exosc5 | NP_613052.1 |
Danio rerio (zebrafish) | exosc5 | NP_001038817.2 |
Eremothecium gossypii | AGOS_AAR035C | NP_982576.2 |
Arabidopsis thaliana (thale cress) | AT3G46210 | NP_001030818.1 |
Homo sapiens (human) | EXOSC5 | NP_064543.3 |
Canis lupus familiaris (dog) | EXOSC5 | XP_852838.1 |
Rattus norvegicus (Norway rat) | Exosc5 | NP_001100963.2 |
Drosophila melanogaster (fruit fly) | Rrp46 | NP_650001.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002177 | XP_308011.5 |
Caenorhabditis elegans (roundworm) | crn-5 | NP_496284.1 |
Bos taurus (cattle) | EXOSC5 | XP_005219175.1 |
The roles of SSU processome components and surveillance factors in the initial processing of human ribosomal RNA.
Sloan KE, Bohnsack MT, Schneider C, Watkins NJ
RNA (New York, N.Y.)20(4)540-50(2014 Apr)
DDX60, a DEXD/H box helicase, is a novel antiviral factor promoting RIG-I-like receptor-mediated signaling.
Miyashita M, Oshiumi H, Matsumoto M, Seya T
Molecular and cellular biology31(18)3802-19(2011 Sep)
Antisense RNA polymerase II divergent transcripts are P-TEFb dependent and substrates for the RNA exosome.
Flynn RA, Almada AE, Zamudio JR, Sharp PA
Proceedings of the National Academy of Sciences of the United States of America108(26)10460-5(2011 Jun)
The RNA exosome targets the AID cytidine deaminase to both strands of transcribed duplex DNA substrates.
Basu U, Meng FL, Keim C, Grinstein V, Pefanis E, Eccleston J, Zhang T, Myers D, Wasserman CR, Wesemann DR, Januszyk K, Gregory RI, Deng H, Lima CD, Alt FW
Cell144(3)353-63(2011 Feb)
A link between nuclear RNA surveillance, the human exosome and RNA polymerase II transcriptional termination.
de Almeida SF, Garc?a-Sacrist?n A, Cust?dio N, Carmo-Fonseca M
Nucleic acids research38(22)8015-26(2010 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Exosc5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Exosc5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa11240 | |
Clone ID Related Accession (Same CDS sequence) | XM_006228437.3 , NM_001107493.2 | |
Accession Version | NM_001107493.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 708bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-27 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | exosome complex component RRP46 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from H31667.1 and BC167023.1. On Nov 24, 2010 this sequence version replaced NM_001107493.1. ##Evidence-Data-START## Transcript exon combination :: FQ225297.1, EV776639.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGAGGGAG CAAAGCGTGC AGACGCCAAG GTACTCACTG ACACCGGAAC AGAGTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001100963.2 |
CDS | 84..791 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107493.2 |
1 | ATGGAGGGAG CAAAGCGTGC AGACGCCAAG GTACTCACTG ACACCGGAAC AGAGTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa11240 | |
Clone ID Related Accession (Same CDS sequence) | XM_006228437.3 , NM_001107493.2 | |
Accession Version | XM_006228437.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 708bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | exosome complex component RRP46 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006228437.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGGAG CAAAGCGTGC AGACGCCAAG GTACTCACTG ACACCGGAAC AGAGTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006228499.1 |
CDS | 167..874 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006228437.3 |
1 | ATGGAGGGAG CAAAGCGTGC AGACGCCAAG GTACTCACTG ACACCGGAAC AGAGTCCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The roles of SSU processome components and surveillance factors in the initial processing of human ribosomal RNA. |
DDX60, a DEXD/H box helicase, is a novel antiviral factor promoting RIG-I-like receptor-mediated signaling. |
Antisense RNA polymerase II divergent transcripts are P-TEFb dependent and substrates for the RNA exosome. |
The RNA exosome targets the AID cytidine deaminase to both strands of transcribed duplex DNA substrates. |
A link between nuclear RNA surveillance, the human exosome and RNA polymerase II transcriptional termination. |