Gene Symbol | Supt5h |
Entrez Gene ID | 308472 |
Full Name | SPT5 homolog, DSIF elongation factor subunit |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Supt5h cDNA ORF clone
Gene Symbol | Supt5h |
Entrez Gene ID | 308472 |
Full Name | SPT5 homolog, DSIF elongation factor subunit |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001107497.2 | NP_001100967.2 | transcription elongation factor SPT5 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP005021 | XP_001231045.2 |
Caenorhabditis elegans (roundworm) | spt-5 | NP_502283.1 |
Xenopus tropicalis (tropical clawed frog) | supt5h | NP_001123796.1 |
Canis lupus familiaris (dog) | SUPT5H | XP_005616644.1 |
Mus musculus (house mouse) | Supt5 | NP_038704.1 |
Gallus gallus (chicken) | SUPT5H | NP_001026555.1 |
Neurospora crassa | NCU06929 | XP_959276.2 |
SUPT5H | XP_001088495.1 | |
Bos taurus (cattle) | SUPT5H | NP_001076908.2 |
Rattus norvegicus (Norway rat) | Supt5h | NP_001100967.2 |
Schizosaccharomyces pombe (fission yeast) | spt5 | NP_593191.1 |
Arabidopsis thaliana (thale cress) | AT2G34210 | NP_180968.2 |
Oryza sativa (rice) | Os02g0772000 | NP_001173159.1 |
Saccharomyces cerevisiae (baker's yeast) | SPT5 | NP_013703.1 |
Eremothecium gossypii | AGOS_ADR187W | NP_984283.2 |
Homo sapiens (human) | SUPT5H | NP_001104490.1 |
Pan troglodytes (chimpanzee) | SUPT5H | XP_512652.3 |
Danio rerio (zebrafish) | supt5h | NP_571748.2 |
Drosophila melanogaster (fruit fly) | Spt5 | NP_652610.1 |
Kluyveromyces lactis | KLLA0B00891g | XP_451570.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_12268 | XP_003715018.1 |
Arabidopsis thaliana (thale cress) | GTA2 | NP_192575.3 |
Control of transcriptional elongation.
Kwak H, Lis JT
Annual review of genetics47483-508(2013)
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)
Genome-wide siRNA screen reveals amino acid starvation-induced autophagy requires SCOC and WAC.
McKnight NC, Jefferies HB, Alemu EA, Saunders RE, Howell M, Johansen T, Tooze SA
The EMBO journal31(8)1931-46(2012 Apr)
RNA polymerase I activity is regulated at multiple steps in the transcription cycle: recent insights into factors that influence transcription elongation.
Schneider DA
Gene493(2)176-84(2012 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Supt5h gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Supt5h cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa11265 | |
Clone ID Related Accession (Same CDS sequence) | NM_001107497.2 | |
Accession Version | NM_001107497.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3252bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-01 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | transcription elongation factor SPT5 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CB751273.1, BC166741.1, CR755056.1 and DY319730.1. On Sep 4, 2012 this sequence version replaced NM_001107497.1. Sequence Note: This RefSeq record was created from transcript data from different strains because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGTCGGACA GCGAAGACAG CAACTTCTCG GAGGAGGAGG ACAGCGAGCG CAGCAGCGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001100967.2 |
CDS | 84..3335 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107497.2 |
1 | ATGTCGGACA GCGAAGACAG CAACTTCTCG GAGGAGGAGG ACAGCGAGCG CAGCAGCGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Control of transcriptional elongation. |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. |
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. |
Genome-wide siRNA screen reveals amino acid starvation-induced autophagy requires SCOC and WAC. |
RNA polymerase I activity is regulated at multiple steps in the transcription cycle: recent insights into factors that influence transcription elongation. |