| Gene Symbol | Usp47 |
| Entrez Gene ID | 308896 |
| Full Name | ubiquitin specific peptidase 47 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Rattus norvegicus(Norway rat) |
| Genome |
The following Usp47 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Usp47 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ORa05371 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001107542.2 | |
| Accession Version | NM_001107542.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 4068bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-05-27 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | ubiquitin carboxyl-terminal hydrolase 47 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC166609.1, EV771677.1, CV106232.1, CA512624.1, CO571839.1, CF109520.1 and CB325126.1. On May 29, 2008 this sequence version replaced NM_001107542.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGTGCCCG GCGAGGAGAA CCAACTGGTC CCGAAGGAGA TAGAAAATGC TGCTGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001101012.2 |
| CDS | 363..4430 |
| Translation |
Target ORF information:
Target ORF information:
|
 NM_001107542.2 |
1 | ATGGTGCCCG GCGAGGAGAA CCAACTGGTC CCGAAGGAGA TAGAAAATGC TGCTGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa23299 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006230044.3 | |
| Accession Version | XM_006230044.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 4188bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | ubiquitin carboxyl-terminal hydrolase 47 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006230044.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTGCCCG GCGAGGAGAA CCAACTGGTC CCGAAGGAGG ATGTGTTTTG GAGATGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006230106.1 |
| CDS | 189..4376 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006230044.3 |
1 | ATGGTGCCCG GCGAGGAGAA CCAACTGGTC CCGAAGGAGG ATGTGTTTTG GAGATGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa23300 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006230045.2 | |
| Accession Version | XM_006230045.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 4128bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | ubiquitin carboxyl-terminal hydrolase 47 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006230045.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTGCCCG GCGAGGAGAA CCAACTGGTC CCGAAGGAGA TAGAAAATGC TGCTGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006230107.1 |
| CDS | 427..4554 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006230045.2 |
1 | ATGGTGCCCG GCGAGGAGAA CCAACTGGTC CCGAAGGAGA TAGAAAATGC TGCTGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa23301 | |
| Clone ID Related Accession (Same CDS sequence) | XM_006230046.3 | |
| Accession Version | XM_006230046.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 4128bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | ubiquitin carboxyl-terminal hydrolase 47 isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006230046.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTGCCCG GCGAGGAGAA CCAACTGGTC CCGAAGGAGG ATGTGTTTTG GAGATGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_006230108.1 |
| CDS | 189..4316 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_006230046.3 |
1 | ATGGTGCCCG GCGAGGAGAA CCAACTGGTC CCGAAGGAGG ATGTGTTTTG GAGATGCAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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USP47 is a deubiquitylating enzyme that regulates base excision repair by controlling steady-state levels of DNA polymerase ?. |
The ubiquitin-specific protease USP47 is a novel beta-TRCP interactor regulating cell survival. |
Gene expression analysis in response to lung toxicants: I. Sequencing and microarray development. |
