Gene Symbol | Ikzf5 |
Entrez Gene ID | 309031 |
Full Name | IKAROS family zinc finger 5 |
Synonyms | Zfpn1a5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Ikzf5 cDNA ORF clone
Gene Symbol | Ikzf5 |
Entrez Gene ID | 309031 |
Full Name | IKAROS family zinc finger 5 |
Synonyms | Zfpn1a5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006230401.2 | XP_006230463.1 | zinc finger protein Pegasus isoform X1 |
XM_017589224.1 | XP_017444713.1 | zinc finger protein Pegasus isoform X2 |
NM_001107555.1 | NP_001101025.1 | zinc finger protein Pegasus |
Pan troglodytes (chimpanzee) | IKZF5 | XP_003312848.1 |
Mus musculus (house mouse) | Ikzf5 | NP_780324.2 |
Canis lupus familiaris (dog) | IKZF5 | XP_005637876.1 |
Bos taurus (cattle) | IKZF5 | NP_001077182.1 |
Rattus norvegicus (Norway rat) | Ikzf5 | NP_001101025.1 |
Danio rerio (zebrafish) | ikzf5 | NP_991164.1 |
Xenopus tropicalis (tropical clawed frog) | ikzf5 | NP_001017355.1 |
Homo sapiens (human) | IKZF5 | NP_001258769.1 |
IKZF5 | XP_001108027.2 | |
Gallus gallus (chicken) | IKZF5 | NP_001026766.1 |
Structural studies on a protein-binding zinc-finger domain of Eos reveal both similarities and differences to classical zinc fingers.
Westman BJ, Perdomo J, Matthews JM, Crossley M, Mackay JP
Biochemistry43(42)13318-27(2004 Oct)
Eos and pegasus, two members of the Ikaros family of proteins with distinct DNA binding activities.
Perdomo J, Holmes M, Chong B, Crossley M
The Journal of biological chemistry275(49)38347-54(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Ikzf5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ikzf5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa03945 | |
Clone ID Related Accession (Same CDS sequence) | XM_006230401.2 , NM_001107555.1 | |
Accession Version | NM_001107555.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1260bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-27 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | zinc finger protein Pegasus | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473953.1. On or before Oct 4, 2007 this sequence version replaced XM_219325.4, XM_001053740.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN01906349 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGGTGAAA AGAAGCCAGA GCCTTTGGAC TTCGTCAAAG ATTTCCAGGA ATACCTGACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001101025.1 |
CDS | 319..1578 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107555.1 |
1 | ATGGGTGAAA AGAAGCCAGA GCCTTTGGAC TTCGTCAAAG ATTTCCAGGA ATACCTGACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa03945 | |
Clone ID Related Accession (Same CDS sequence) | XM_006230401.2 , NM_001107555.1 | |
Accession Version | XM_006230401.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1260bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | zinc finger protein Pegasus isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006230401.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGTGAAA AGAAGCCAGA GCCTTTGGAC TTCGTCAAAG ATTTCCAGGA ATACCTGACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006230463.1 |
CDS | 170..1429 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006230401.2 |
1 | ATGGGTGAAA AGAAGCCAGA GCCTTTGGAC TTCGTCAAAG ATTTCCAGGA ATACCTGACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa56621 | |
Clone ID Related Accession (Same CDS sequence) | XM_017589224.1 | |
Accession Version | XM_017589224.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1056bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | zinc finger protein Pegasus isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTAGTAG ACGGGTTTGA AAGGACCTTC GATGGGAAGC TCAAGTGCCG GTACTGCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017444713.1 |
CDS | 156..1211 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017589224.1 |
1 | ATGTTAGTAG ACGGGTTTGA AAGGACCTTC GATGGGAAGC TCAAGTGCCG GTACTGCAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Structural studies on a protein-binding zinc-finger domain of Eos reveal both similarities and differences to classical zinc fingers. |
Eos and pegasus, two members of the Ikaros family of proteins with distinct DNA binding activities. |