Gene Symbol | Ccdc39 |
Entrez Gene ID | 310315 |
Full Name | coiled-coil domain containing 39 |
Synonyms | RGD1306277 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Ccdc39 cDNA ORF clone
Gene Symbol | Ccdc39 |
Entrez Gene ID | 310315 |
Full Name | coiled-coil domain containing 39 |
Synonyms | RGD1306277 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017590855.1 | XP_017446344.1 | coiled-coil domain-containing protein 39 isoform X1 |
NM_001107667.1 | NP_001101137.1 | coiled-coil domain-containing protein 39 |
XM_017590856.1 | XP_017446345.1 | coiled-coil domain-containing protein 39 isoform X2 |
Bos taurus (cattle) | CCDC39 | NP_001192985.1 |
Gallus gallus (chicken) | CCDC39 | XP_422777.3 |
Xenopus tropicalis (tropical clawed frog) | ccdc39 | NP_001072342.1 |
Canis lupus familiaris (dog) | CCDC39 | XP_545213.3 |
Rattus norvegicus (Norway rat) | Ccdc39 | NP_001101137.1 |
Danio rerio (zebrafish) | ccdc39 | XP_682709.6 |
Homo sapiens (human) | CCDC39 | NP_852091.1 |
Pan troglodytes (chimpanzee) | CCDC39 | XP_003310174.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001293 | XP_321854.5 |
Mus musculus (house mouse) | Ccdc39 | NP_080498.1 |
Drosophila melanogaster (fruit fly) | CG17387 | NP_649495.1 |
A mutation in
Abdelhamed Z, Vuong SM, Hill L, Shula C, Timms A, Beier D, Campbell K, Mangano FT, Stottmann RW, Goto J
Development (Cambridge, England)145(1)(2018 Jan)
Assessment of ciliary phenotype in primary ciliary dyskinesia by micro-optical coherence tomography.
Solomon GM, Francis R, Chu KK, Birket SE, Gabriel G, Trombley JE, Lemke KL, Klena N, Turner B, Tearney GJ, Lo CW, Rowe SM
JCI insight2(5)e91702(2017 Mar)
Mutations in GAS8, a Gene Encoding a Nexin-Dynein Regulatory Complex Subunit, Cause Primary Ciliary Dyskinesia with Axonemal Disorganization.
Jeanson L, Thomas L, Copin B, Coste A, Sermet-Gaudelus I, Dastot-Le Moal F, Duquesnoy P, Montantin G, Collot N, Tissier S, Papon JF, Clement A, Louis B, Escudier E, Amselem S, Legendre M
Human mutation37(8)776-85(2016 08)
Loss-of-Function GAS8 Mutations Cause Primary Ciliary Dyskinesia and Disrupt the Nexin-Dynein Regulatory Complex.
Olbrich H, Cremers C, Loges NT, Werner C, Nielsen KG, Marthin JK, Philipsen M, Wallmeier J, Pennekamp P, Menchen T, Edelbusch C, Dougherty GW, Schwartz O, Thiele H, Altm?ller J, Rommelmann F, Omran H
American journal of human genetics97(4)546-54(2015 Oct)
Global genetic analysis in mice unveils central role for cilia in congenital heart disease.
Li Y, Klena NT, Gabriel GC, Liu X, Kim AJ, Lemke K, Chen Y, Chatterjee B, Devine W, Damerla RR, Chang C, Yagi H, San Agustin JT, Thahir M, Anderton S, Lawhead C, Vescovi A, Pratt H, Morgan J, Haynes L, Smith CL, Eppig JT, Reinholdt L, Francis R, Leatherbury L, Ganapathiraju MK, Tobita K, Pazour GJ, Lo CW
Nature521(7553)520-4(2015 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Ccdc39 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ccdc39 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa05531 | |
Clone ID Related Accession (Same CDS sequence) | NM_001107667.1 | |
Accession Version | NM_001107667.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2784bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | coiled-coil domain-containing protein 39 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473961.1. On or before Oct 4, 2007 this sequence version replaced XM_227031.4, XM_001060985.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGTGAAAG GACTGGTTGA ACACCGCCAG GACAGCCAGA TGAGGGCCTG TGGGAGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001101137.1 |
CDS | 8..2791 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001107667.1 |
1 | ATGGTGAAAG GACTGGTTGA ACACCGCCAG GACAGCCAGA TGAGGGCCTG TGGGAGGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa59740 | |
Clone ID Related Accession (Same CDS sequence) | XM_017590855.1 | |
Accession Version | XM_017590855.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2805bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | coiled-coil domain-containing protein 39 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005101.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCAGTG AGTTCCTGTC AGAACTGCAC TGGGAAGATG GGTTCGCCAT TCCCGTGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017446344.1 |
CDS | 1057..3861 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017590855.1 |
1 | ATGAGCAGTG AGTTCCTGTC AGAACTGCAC TGGGAAGATG GGTTCGCCAT TCCCGTGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa59741 | |
Clone ID Related Accession (Same CDS sequence) | XM_017590856.1 | |
Accession Version | XM_017590856.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2739bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | coiled-coil domain-containing protein 39 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005101.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAACGT TATTTACAGA AAAGTTAGCA AAACTACACA AAGAAAAATC AAACTTGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017446345.1 |
CDS | 159..2897 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017590856.1 |
1 | ATGGCAACGT TATTTACAGA AAAGTTAGCA AAACTACACA AAGAAAAATC AAACTTGCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A mutation in |
Assessment of ciliary phenotype in primary ciliary dyskinesia by micro-optical coherence tomography. |
Mutations in GAS8, a Gene Encoding a Nexin-Dynein Regulatory Complex Subunit, Cause Primary Ciliary Dyskinesia with Axonemal Disorganization. |
Loss-of-Function GAS8 Mutations Cause Primary Ciliary Dyskinesia and Disrupt the Nexin-Dynein Regulatory Complex. |
Global genetic analysis in mice unveils central role for cilia in congenital heart disease. |