Gene Symbol | Sec22b |
Entrez Gene ID | 310710 |
Full Name | SEC22 homolog B, vesicle trafficking protein |
Synonyms | Sec22l1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Sec22b cDNA ORF clone
Gene Symbol | Sec22b |
Entrez Gene ID | 310710 |
Full Name | SEC22 homolog B, vesicle trafficking protein |
Synonyms | Sec22l1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001025686.1 | NP_001020857.1 | vesicle-trafficking protein SEC22b precursor |
Rattus norvegicus (Norway rat) | Sec22b | NP_001020857.1 |
Danio rerio (zebrafish) | sec22bb | NP_958459.1 |
Saccharomyces cerevisiae (baker's yeast) | SEC22 | NP_013370.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_04050 | XP_003719791.1 |
Neurospora crassa | NCU06708 | XP_960888.1 |
Arabidopsis thaliana (thale cress) | SEC22 | NP_172653.1 |
Oryza sativa (rice) | Os03g0791500 | NP_001051520.2 |
Xenopus tropicalis (tropical clawed frog) | sec22b | NP_989156.1 |
Canis lupus familiaris (dog) | LOC475816 | XP_533025.1 |
Danio rerio (zebrafish) | LOC100535340 | XP_003199112.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP012717 | XP_307637.2 |
Caenorhabditis elegans (roundworm) | sec-22 | NP_508198.1 |
Homo sapiens (human) | SEC22B | NP_004883.3 |
Mus musculus (house mouse) | Sec22b | NP_035472.1 |
Drosophila melanogaster (fruit fly) | Sec22 | NP_001259103.1 |
Kluyveromyces lactis | KLLA0F20251g | XP_455989.1 |
Eremothecium gossypii | AGOS_AGR267W | NP_986933.2 |
SEC22B | XP_001114286.1 | |
Bos taurus (cattle) | LOC614775 | NP_001069811.1 |
Gallus gallus (chicken) | SEC22B | NP_001026437.1 |
Schizosaccharomyces pombe (fission yeast) | sec22 | NP_596218.2 |
Autophagic substrate clearance requires activity of the syntaxin-5 SNARE complex.
Renna M, Schaffner C, Winslow AR, Menzies FM, Peden AA, Floto RA, Rubinsztein DC
Journal of cell science124(Pt 3)469-82(2011 Feb)
Members of a mammalian SNARE complex interact in the endoplasmic reticulum in vivo and are found in COPI vesicles.
Verrier SE, Willmann M, Wenzel D, Winter U, von Mollard GF, S?ling HD
European journal of cell biology87(11)863-78(2008 Nov)
Use of fluorescence-activated vesicle sorting for isolation of Naked2-associated, basolaterally targeted exocytic vesicles for proteomics analysis.
Cao Z, Li C, Higginbotham JN, Franklin JL, Tabb DL, Graves-Deal R, Hill S, Cheek K, Jerome WG, Lapierre LA, Goldenring JR, Ham AJ, Coffey RJ
Molecular & cellular proteomics : MCP7(9)1651-67(2008 Sep)
The transport signal on Sec22 for packaging into COPII-coated vesicles is a conformational epitope.
Mancias JD, Goldberg J
Molecular cell26(3)403-14(2007 May)
Molecular anatomy of a trafficking organelle.
Takamori S, Holt M, Stenius K, Lemke EA, Gr?nborg M, Riedel D, Urlaub H, Schenck S, Br?gger B, Ringler P, M?ller SA, Rammner B, Gr?ter F, Hub JS, De Groot BL, Mieskes G, Moriyama Y, Klingauf J, Grubm?ller H, Heuser J, Wieland F, Jahn R
Cell127(4)831-46(2006 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Sec22b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sec22b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa07538 | |
Clone ID Related Accession (Same CDS sequence) | NM_001025686.1 | |
Accession Version | NM_001025686.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 648bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-09 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | vesicle-trafficking protein SEC22b precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC098725.1. On Jul 22, 2005 this sequence version replaced XM_227499.3. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC098725.1, FQ211503.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTGCTGC TGACGATGAT CGCCCGCGTA GCGGACGGGC TTCCTCTGGC CGCCTCGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001020857.1 |
CDS | 107..754 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001025686.1 |
1 | ATGGTGCTGC TGACGATGAT CGCCCGCGTA GCGGACGGGC TTCCTCTGGC CGCCTCGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Autophagic substrate clearance requires activity of the syntaxin-5 SNARE complex. |
Members of a mammalian SNARE complex interact in the endoplasmic reticulum in vivo and are found in COPI vesicles. |
Use of fluorescence-activated vesicle sorting for isolation of Naked2-associated, basolaterally targeted exocytic vesicles for proteomics analysis. |
The transport signal on Sec22 for packaging into COPII-coated vesicles is a conformational epitope. |
Molecular anatomy of a trafficking organelle. |