Gene Symbol | Uvssa |
Entrez Gene ID | 314061 |
Full Name | UV-stimulated scaffold protein A |
Synonyms | RGD1306371 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Uvssa cDNA ORF clone
Gene Symbol | Uvssa |
Entrez Gene ID | 314061 |
Full Name | UV-stimulated scaffold protein A |
Synonyms | RGD1306371 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006251323.3 | XP_006251385.1 | UV-stimulated scaffold protein A isoform X1 |
NM_001134558.1 | NP_001128030.1 | UV-stimulated scaffold protein A |
XM_006251324.3 | XP_006251386.1 | UV-stimulated scaffold protein A isoform X1 |
XM_006251325.3 | XP_006251387.1 | UV-stimulated scaffold protein A isoform X1 |
XM_006251321.3 | XP_006251383.1 | UV-stimulated scaffold protein A isoform X1 |
Pan troglodytes (chimpanzee) | UVSSA | XP_001174295.2 |
Rattus norvegicus (Norway rat) | Uvssa | NP_001128030.1 |
Danio rerio (zebrafish) | uvssa | XP_005157263.1 |
Xenopus tropicalis (tropical clawed frog) | uvssa | NP_001107306.1 |
LOC693853 | XP_001082560.1 | |
Gallus gallus (chicken) | UVSSA | XP_420845.4 |
Canis lupus familiaris (dog) | UVSSA | XP_545930.3 |
Bos taurus (cattle) | KIAA1530 | XP_002688500.3 |
Mus musculus (house mouse) | Uvssa | NP_001074570.1 |
Homo sapiens (human) | UVSSA | NP_065945.2 |
Mutations in UVSSA cause UV-sensitive syndrome and impair RNA polymerase IIo processing in transcription-coupled nucleotide-excision repair.
Nakazawa Y, Sasaki K, Mitsutake N, Matsuse M, Shimada M, Nardo T, Takahashi Y, Ohyama K, Ito K, Mishima H, Nomura M, Kinoshita A, Ono S, Takenaka K, Masuyama R, Kudo T, Slor H, Utani A, Tateishi S, Yamashita S, Stefanini M, Lehmann AR, Yoshiura K, Ogi T
Nature genetics44(5)586-92(2012 May)
UV-sensitive syndrome protein UVSSA recruits USP7 to regulate transcription-coupled repair.
Schwertman P, Lagarou A, Dekkers DH, Raams A, van der Hoek AC, Laffeber C, Hoeijmakers JH, Demmers JA, Fousteri M, Vermeulen W, Marteijn JA
Nature genetics44(5)598-602(2012 May)
Mutations in UVSSA cause UV-sensitive syndrome and destabilize ERCC6 in transcription-coupled DNA repair.
Zhang X, Horibata K, Saijo M, Ishigami C, Ukai A, Kanno S, Tahara H, Neilan EG, Honma M, Nohmi T, Yasui A, Tanaka K
Nature genetics44(5)593-7(2012 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Uvssa gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Uvssa cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa41755 | |
Clone ID Related Accession (Same CDS sequence) | NM_001134558.1 | |
Accession Version | NM_001134558.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2145bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-20 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | UV-stimulated scaffold protein A | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473963.1. On or before Sep 4, 2008 this sequence version replaced XM_234083.4, XM_001065721.1. |
1 | ATGGATCAGA AACTTTCACA GTTGATAGAG GAGCTCACAA CTTCAGGAGA ATCCCAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001128030.1 |
CDS | 450..2594 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001134558.1 |
1 | ATGGATCAGA AACTTTCACA GTTGATAGAG GAGCTCACAA CTTCAGGAGA ATCCCAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa36312 | |
Clone ID Related Accession (Same CDS sequence) | XM_006251323.3 , XM_006251324.3 , XM_006251325.3 , XM_006251321.3 | |
Accession Version | XM_006251323.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | UV-stimulated scaffold protein A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006251323.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCAGA AACTTTCACA GTTGATAGAG GAGCTCACAA CTTCAGGAGA ATCCCAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006251385.1 |
CDS | 187..2349 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006251323.3 |
1 | ATGGATCAGA AACTTTCACA GTTGATAGAG GAGCTCACAA CTTCAGGAGA ATCCCAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa36312 | |
Clone ID Related Accession (Same CDS sequence) | XM_006251323.3 , XM_006251324.3 , XM_006251325.3 , XM_006251321.3 | |
Accession Version | XM_006251324.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | UV-stimulated scaffold protein A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006251324.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCAGA AACTTTCACA GTTGATAGAG GAGCTCACAA CTTCAGGAGA ATCCCAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006251386.1 |
CDS | 116..2278 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006251324.3 |
1 | ATGGATCAGA AACTTTCACA GTTGATAGAG GAGCTCACAA CTTCAGGAGA ATCCCAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa36312 | |
Clone ID Related Accession (Same CDS sequence) | XM_006251323.3 , XM_006251324.3 , XM_006251325.3 , XM_006251321.3 | |
Accession Version | XM_006251325.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | UV-stimulated scaffold protein A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006251325.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCAGA AACTTTCACA GTTGATAGAG GAGCTCACAA CTTCAGGAGA ATCCCAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006251387.1 |
CDS | 245..2407 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006251325.3 |
1 | ATGGATCAGA AACTTTCACA GTTGATAGAG GAGCTCACAA CTTCAGGAGA ATCCCAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa36312 | |
Clone ID Related Accession (Same CDS sequence) | XM_006251323.3 , XM_006251324.3 , XM_006251325.3 , XM_006251321.3 | |
Accession Version | XM_006251321.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | UV-stimulated scaffold protein A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006251321.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATCAGA AACTTTCACA GTTGATAGAG GAGCTCACAA CTTCAGGAGA ATCCCAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006251383.1 |
CDS | 471..2633 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006251321.3 |
1 | ATGGATCAGA AACTTTCACA GTTGATAGAG GAGCTCACAA CTTCAGGAGA ATCCCAACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Mutations in UVSSA cause UV-sensitive syndrome and impair RNA polymerase IIo processing in transcription-coupled nucleotide-excision repair. |
UV-sensitive syndrome protein UVSSA recruits USP7 to regulate transcription-coupled repair. |
Mutations in UVSSA cause UV-sensitive syndrome and destabilize ERCC6 in transcription-coupled DNA repair. |