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Ccz1b cDNA ORF clone, Rattus norvegicus(Norway rat)

Summary

Gene Symbol Ccz1b
Entrez Gene ID 360768
Full Name CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated
Synonyms Ccz1,RGD1306410
General protein information
Preferred Names

CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated

Names

vacuolar fusion protein CCZ1 homolog
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated B
CCZ1 vacuolar protein trafficking and biogenesis associated homolog
Gene Type protein-coding
Organism Rattus norvegicus(Norway rat)
Genome

12

12p11

Reference Sequences (RefSeq)

mRNA and Protein(s)

mRNA Protein Name
NM_001014126.1 NP_001014148.1 vacuolar fusion protein CCZ1 homolog

Pathways from BioSystems


Homologies


Pan troglodytes (chimpanzee) CCZ1B XP_519566.2
Caenorhabditis elegans (roundworm) ccz-1 NP_506387.1
LOC721820 XP_001118015.1
Canis lupus familiaris (dog) CCZ1 XP_536878.3
Bos taurus (cattle) CCZ1 NP_001068960.1
Danio rerio (zebrafish) ccz1 NP_956428.1
Arabidopsis thaliana (thale cress) AT1G80910 NP_178206.1
Pan troglodytes (chimpanzee) LOC463258 XP_518965.3
Mus musculus (house mouse) Ccz1 NP_808350.1
Gallus gallus (chicken) CCZ1 NP_001006158.1
Drosophila melanogaster (fruit fly) CG14980 NP_647835.1
Anopheles gambiae (African malaria mosquito) AgaP_AGAP006687 XP_557365.2
Oryza sativa (rice) Os08g0427300 NP_001061842.1
Xenopus tropicalis (tropical clawed frog) ccz1b NP_001008198.1
Homo sapiens (human) CCZ1 NP_056437.4
Homo sapiens (human) CCZ1B NP_932765.1
Rattus norvegicus (Norway rat) Ccz1 NP_001014148.1
Arabidopsis thaliana (thale cress) AT1G16020 NP_849674.1

Gene Ontology


Bibliography

Related articles in PubMed

Systematic analysis of human cells lacking ATG8 proteins uncovers roles for GABARAPs and the CCZ1/MON1 regulator C18orf8/RMC1 in macro and selective autophagic flux.
Pontano Vaites L, Paulo JA, Huttlin EL, Harper JW
Molecular and cellular biology(2017 Oct)

BLOC-3 mutated in Hermansky-Pudlak syndrome is a Rab32/38 guanine nucleotide exchange factor.
Gerondopoulos A, Langemeyer L, Liang JR, Linford A, Barr FA
Current biology : CB22(22)2135-9(2012 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Ccz1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ccz1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa05059 NM_001014126.1
Latest version!		 Rattus norvegicus CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated (Ccz1b), mRNA. pcDNA3.1-C-(k)DYK or customized vector 5-7 $188.30
$269.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)


CloneID ORa05059
Clone ID Related Accession (Same CDS sequence) NM_001014126.1
Accession Version NM_001014126.1 Latest version! Documents for ORF clone product in default vector
Sequence Information ORF Nucleotide Sequence (Length: 849bp)
Protein sequence
SNP
Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
Clone information Clone Map MSDS
Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
ORF Insert Method CloneEZ™ Seamless cloning technology
Insert Structure linear
Update Date 2018-05-27
Organism Rattus norvegicus(Norway rat)
Product vacuolar fusion protein CCZ1 homolog
Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC079086.1. On Apr 20, 2005 this sequence version replaced XM_341037.2. ##Evidence-Data-START## Transcript exon combination :: BC079086.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## 

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCGGCAG CGGCGGCCGG GACAGGGACT TGGGCAGCCC AGGAAAAGCA GTTCCCGCCG 
GCGCTGTTGA GCTTCTTCAT CTACAACCCA CGTTTCGGGC CGCGAGAGGG AGAGGAAGAA 
AATAAAATTT TGTTTTACCA TCCAAATGAA GTAGAAAAGA ATGAAAAAAT TAGAAATGTT 
GGATTATGTG AAGCAATCGT ACAGTTTACA AGGACTTTTA GCCCATCGAA ACCTGCAAAA 
TCTTTACACA CACAGAAGAA TAGACAGTTC TTCAATGAAC CAGAAGAAAA TTTCTGGATG 
GTCATGGTTG TTCGGAATCC TATCATCGAA AAGCAGAGTA AAGATGGCAA GGCGGTAGTG 
GAGTACCAAG AGGAGGAACT GTTGGACAAG GTGTATAGCT CAGTGCTCCA GCAGTGCTAC 
AGCATGTACA AGCTTTTTAA TGGGACGTTT CTGAAAGCCA TGGAAGATGG AGGTGTCAAG 
CTCCTAAAAG AGAGATTAGA GAAATTCTTC CATCGGTATT TGCAGACGCT GCATTTGCAA 
TCATGTGACC TCCTGGATAT CTTTGGTGGG ATCAGCTTCT TCCCGTTGGA TAAAATGACT 
TACTTGAAAA TCCAGTCCTT TATTAACCGA ATGGAAGAAA GCCTGAGTGT AGTCAAATAC 
ACAGCATTCC TGTACAACGA CCAACTCATC TGGAGTGGAC TAGAACAAGA TGACATGAGA 
ATTTTGTACA AATACCTCAC CACCTCACTG TTCCCCAGAC ACATCGAACC TGAGTTGGCG 
GGAAGGGATT CCCCAGTAAG GGCGGAAATG CCGGGAAATC TTCAACACTA CGGAAGTTTA 
CCTCATTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

RefSeq NP_001014148.1
CDS78..926
Translation

Target ORF information:

RefSeq Version NM_001014126.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated (Ccz1b), mRNA.

Target ORF information:

Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+/C-(K)DYK
 NM_001014126.1

ORF Insert Sequence:

1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
ATGGCGGCAG CGGCGGCCGG GACAGGGACT TGGGCAGCCC AGGAAAAGCA GTTCCCGCCG 
GCGCTGTTGA GCTTCTTCAT CTACAACCCA CGTTTCGGGC CGCGAGAGGG AGAGGAAGAA 
AATAAAATTT TGTTTTACCA TCCAAATGAA GTAGAAAAGA ATGAAAAAAT TAGAAATGTT 
GGATTATGTG AAGCAATCGT ACAGTTTACA AGGACTTTTA GCCCATCGAA ACCTGCAAAA 
TCTTTACACA CACAGAAGAA TAGACAGTTC TTCAATGAAC CAGAAGAAAA TTTCTGGATG 
GTCATGGTTG TTCGGAATCC TATCATCGAA AAGCAGAGTA AAGATGGCAA GGCGGTAGTG 
GAGTACCAAG AGGAGGAACT GTTGGACAAG GTGTATAGCT CAGTGCTCCA GCAGTGCTAC 
AGCATGTACA AGCTTTTTAA TGGGACGTTT CTGAAAGCCA TGGAAGATGG AGGTGTCAAG 
CTCCTAAAAG AGAGATTAGA GAAATTCTTC CATCGGTATT TGCAGACGCT GCATTTGCAA 
TCATGTGACC TCCTGGATAT CTTTGGTGGG ATCAGCTTCT TCCCGTTGGA TAAAATGACT 
TACTTGAAAA TCCAGTCCTT TATTAACCGA ATGGAAGAAA GCCTGAGTGT AGTCAAATAC 
ACAGCATTCC TGTACAACGA CCAACTCATC TGGAGTGGAC TAGAACAAGA TGACATGAGA 
ATTTTGTACA AATACCTCAC CACCTCACTG TTCCCCAGAC ACATCGAACC TGAGTTGGCG 
GGAAGGGATT CCCCAGTAAG GGCGGAAATG CCGGGAAATC TTCAACACTA CGGAAGTTTA 
CCTCATTGA

The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

PubMed

book

Systematic analysis of human cells lacking ATG8 proteins uncovers roles for GABARAPs and the CCZ1/MON1 regulator C18orf8/RMC1 in macro and selective autophagic flux.
Molecular and cellular biology(2017 Oct)
Pontano Vaites L,Paulo JA,Huttlin EL,Harper JW


book

BLOC-3 mutated in Hermansky-Pudlak syndrome is a Rab32/38 guanine nucleotide exchange factor.
Current biology : CB22(22)2135-9(2012 Nov)
Gerondopoulos A,Langemeyer L,Liang JR,Linford A,Barr FA