Gene Symbol | Pcdh7 |
Entrez Gene ID | 360942 |
Full Name | protocadherin 7 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Pcdh7 cDNA ORF clone
gRNAs
Gene Symbol | Pcdh7 |
Entrez Gene ID | 360942 |
Full Name | protocadherin 7 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006251022.3 | XP_006251084.1 | protocadherin-7 isoform X4 |
XM_017599293.1 | XP_017454782.1 | protocadherin-7 isoform X6 |
NM_001004087.1 | NP_001004087.1 | protocadherin-7 precursor |
XM_008770189.2 | XP_008768411.1 | protocadherin-7 isoform X2 |
XM_017599291.1 | XP_017454780.1 | protocadherin-7 isoform X2 |
XM_006251017.3 | XP_006251079.1 | protocadherin-7 isoform X1 |
XM_006251023.3 | XP_006251085.1 | protocadherin-7 isoform X5 |
XM_017599292.1 | XP_017454781.1 | protocadherin-7 isoform X3 |
Homo sapiens (human) | PCDH7 | NP_001166994.1 |
Bos taurus (cattle) | PCDH7 | NP_001179904.1 |
Gallus gallus (chicken) | PCDH7 | XP_420748.3 |
Danio rerio (zebrafish) | pcdh7b | XP_683121.5 |
Xenopus tropicalis (tropical clawed frog) | pcdh7 | NP_001128292.2 |
Mus musculus (house mouse) | Pcdh7 | NP_001116230.1 |
Rattus norvegicus (Norway rat) | Pcdh7 | NP_001004087.1 |
Pan troglodytes (chimpanzee) | PCDH7 | XP_003310324.1 |
Canis lupus familiaris (dog) | PCDH7 | XP_545961.3 |
Fibroblast cell shape and adhesion in vitro is altered by overexpression of the 7a and 7b isoforms of protocadherin 7, but not the 7c isoform.
Yoshida K
Cellular & molecular biology letters8(3)735-41(2003)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Pcdh7 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pcdh7 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa09983 | |
Clone ID Related Accession (Same CDS sequence) | NM_001004087.1 | |
Accession Version | NM_001004087.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3744bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-26 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protocadherin-7 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY690616.1. On Sep 3, 2004 this sequence version replaced XM_341219.1. ##Evidence-Data-START## Transcript exon combination :: AY690616.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001004087.1 |
CDS | 9..3752 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa36108 | |
Clone ID Related Accession (Same CDS sequence) | XM_006251017.3 | |
Accession Version | XM_006251017.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3768bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protocadherin-7 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006251017.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006251079.1 |
CDS | 90..3857 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa36109 | |
Clone ID Related Accession (Same CDS sequence) | XM_008770189.2 , XM_017599291.1 | |
Accession Version | XM_008770189.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3480bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protocadherin-7 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008770189.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008768411.1 |
CDS | 90..3569 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa36109 | |
Clone ID Related Accession (Same CDS sequence) | XM_008770189.2 , XM_017599291.1 | |
Accession Version | XM_017599291.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3480bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protocadherin-7 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017454780.1 |
CDS | 90..3569 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa36112 | |
Clone ID Related Accession (Same CDS sequence) | XM_006251022.3 | |
Accession Version | XM_006251022.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3252bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protocadherin-7 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006251022.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006251084.1 |
CDS | 90..3341 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa36113 | |
Clone ID Related Accession (Same CDS sequence) | XM_006251023.3 | |
Accession Version | XM_006251023.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3210bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protocadherin-7 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006251023.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006251085.1 |
CDS | 90..3299 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58362 | |
Clone ID Related Accession (Same CDS sequence) | XM_017599292.1 | |
Accession Version | XM_017599292.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3456bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protocadherin-7 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017454781.1 |
CDS | 90..3545 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa58363 | |
Clone ID Related Accession (Same CDS sequence) | XM_017599293.1 | |
Accession Version | XM_017599293.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3198bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | protocadherin-7 isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017454782.1 |
CDS | 90..3287 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGAGGA TGCGGACCAC GGGATGGGCG CGCGGCTGGT GCTTGGGCTG TTGTCTCCTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Fibroblast cell shape and adhesion in vitro is altered by overexpression of the 7a and 7b isoforms of protocadherin 7, but not the 7c isoform. |