Gene Symbol | Alkbh3 |
Entrez Gene ID | 362169 |
Full Name | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Alkbh3 cDNA ORF clone
Gene Symbol | Alkbh3 |
Entrez Gene ID | 362169 |
Full Name | alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006234585.3 | XP_006234647.1 | alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 isoform X1 |
NM_001014180.1 | NP_001014202.1 | alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 |
Gallus gallus (chicken) | ALKBH3 | XP_421095.4 |
Xenopus tropicalis (tropical clawed frog) | alkbh3 | XP_002937344.2 |
Rattus norvegicus (Norway rat) | Alkbh3 | NP_001014202.1 |
Danio rerio (zebrafish) | alkbh3 | NP_001003511.1 |
Pan troglodytes (chimpanzee) | ALKBH3 | XP_001159019.1 |
Canis lupus familiaris (dog) | ALKBH3 | XP_533147.3 |
Homo sapiens (human) | ALKBH3 | NP_631917.1 |
Bos taurus (cattle) | ALKBH3 | NP_001032691.1 |
Mus musculus (house mouse) | Alkbh3 | NP_081220.1 |
Transcriptome-wide mapping reveals reversible and dynamic N(1)-methyladenosine methylome.
Li X, Xiong X, Wang K, Wang L, Shu X, Ma S, Yi C
Nature chemical biology12(5)311-6(2016 May)
The dynamic N(1)-methyladenosine methylome in eukaryotic messenger RNA.
Dominissini D, Nachtergaele S, Moshitch-Moshkovitz S, Peer E, Kol N, Ben-Haim MS, Dai Q, Di Segni A, Salmon-Divon M, Clark WC, Zheng G, Pan T, Solomon O, Eyal E, Hershkovitz V, Han D, Dor? LC, Amariglio N, Rechavi G, He C
Nature530(7591)441-6(2016 Feb)
DNA unwinding by ASCC3 helicase is coupled to ALKBH3-dependent DNA alkylation repair and cancer cell proliferation.
Dango S, Mosammaparast N, Sowa ME, Xiong LJ, Wu F, Park K, Rubin M, Gygi S, Harper JW, Shi Y
Molecular cell44(3)373-84(2011 Nov)
Human ABH3 structure and key residues for oxidative demethylation to reverse DNA/RNA damage.
Sundheim O, V?gb? CB, Bj?r?s M, Sousa MM, Talstad V, Aas PA, Drabl?s F, Krokan HE, Tainer JA, Slupphaug G
The EMBO journal25(14)3389-97(2006 Jul)
Repair of methylation damage in DNA and RNA by mammalian AlkB homologues.
Lee DH, Jin SG, Cai S, Chen Y, Pfeifer GP, O'Connor TR
The Journal of biological chemistry280(47)39448-59(2005 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Alkbh3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Alkbh3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa05317 | |
Clone ID Related Accession (Same CDS sequence) | XM_006234585.3 , NM_001014180.1 | |
Accession Version | NM_001014180.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 888bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-16 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC083756.1. On Apr 20, 2005 this sequence version replaced XM_342469.2. ##Evidence-Data-START## Transcript exon combination :: BC083756.1, FQ229710.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGGGGACA AGAGACAGCG AGCCCGAGTG CAGGGAGCCT GGGCCACACC TACCAAGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001014202.1 |
CDS | 132..1019 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001014180.1 |
1 | ATGGGGGACA AGAGACAGCG AGCCCGAGTG CAGGGAGCCT GGGCCACACC TACCAAGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa05317 | |
Clone ID Related Accession (Same CDS sequence) | XM_006234585.3 , NM_001014180.1 | |
Accession Version | XM_006234585.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 888bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006234585.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGGACA AGAGACAGCG AGCCCGAGTG CAGGGAGCCT GGGCCACACC TACCAAGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006234647.1 |
CDS | 1021..1908 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006234585.3 |
1 | ATGGGGGACA AGAGACAGCG AGCCCGAGTG CAGGGAGCCT GGGCCACACC TACCAAGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Transcriptome-wide mapping reveals reversible and dynamic N(1)-methyladenosine methylome. |
The dynamic N(1)-methyladenosine methylome in eukaryotic messenger RNA. |
DNA unwinding by ASCC3 helicase is coupled to ALKBH3-dependent DNA alkylation repair and cancer cell proliferation. |
Human ABH3 structure and key residues for oxidative demethylation to reverse DNA/RNA damage. |
Repair of methylation damage in DNA and RNA by mammalian AlkB homologues. |