Gene Symbol | Chmp2a |
Entrez Gene ID | 365191 |
Full Name | charged multivesicular body protein 2A |
Synonyms | RGD1305050 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Chmp2a cDNA ORF clone
gRNAs
Gene Symbol | Chmp2a |
Entrez Gene ID | 365191 |
Full Name | charged multivesicular body protein 2A |
Synonyms | RGD1305050 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_001108906.1 | NP_001102376.1 | charged multivesicular body protein 2a |
XM_006228118.2 | XP_006228180.1 | charged multivesicular body protein 2a isoform X2 |
XM_006228117.2 | XP_006228179.1 | charged multivesicular body protein 2a isoform X1 |
Xenopus tropicalis (tropical clawed frog) | chmp2a | NP_001005008.1 |
Homo sapiens (human) | CHMP2A | NP_940818.1 |
Canis lupus familiaris (dog) | CHMP2A | XP_850536.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001285 | XP_321862.3 |
Caenorhabditis elegans (roundworm) | vps-2 | NP_496717.1 |
Schizosaccharomyces pombe (fission yeast) | did4 | NP_593871.3 |
Oryza sativa (rice) | Os07g0236800 | NP_001059248.1 |
Bos taurus (cattle) | CHMP2A | NP_001029722.1 |
Mus musculus (house mouse) | Chmp2a | NP_081161.1 |
Rattus norvegicus (Norway rat) | Chmp2a | NP_001102376.1 |
Danio rerio (zebrafish) | bc2 | NP_998682.1 |
Neurospora crassa | NCU00435 | XP_956699.1 |
Pan troglodytes (chimpanzee) | CHMP2A | XP_003316813.1 |
CHMP2A | XP_001099219.1 | |
Gallus gallus (chicken) | CHMP2A | NP_001074361.1 |
Drosophila melanogaster (fruit fly) | vps2 | NP_651455.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05208 | XP_003712753.1 |
Saccharomyces cerevisiae (baker's yeast) | DID4 | NP_012924.2 |
Kluyveromyces lactis | KLLA0B13343g | XP_452125.1 |
Eremothecium gossypii | AGOS_ABR002C | NP_982948.1 |
Arabidopsis thaliana (thale cress) | VPS2.1 | NP_565336.1 |
LEM2 recruits CHMP7 for ESCRT-mediated nuclear envelope closure in fission yeast and human cells.
Gu M, LaJoie D, Chen OS, von Appen A, Ladinsky MS, Redd MJ, Nikolova L, Bjorkman PJ, Sundquist WI, Ullman KS, Frost A
Proceedings of the National Academy of Sciences of the United States of America114(11)E2166-E2175(2017 Mar)
Spastin and ESCRT-III coordinate mitotic spindle disassembly and nuclear envelope sealing.
Vietri M, Schink KO, Campsteijn C, Wegner CS, Schultz SW, Christ L, Thoresen SB, Brech A, Raiborg C, Stenmark H
Nature522(7555)231-5(2015 Jun)
Structure of cellular ESCRT-III spirals and their relationship to HIV budding.
Cashikar AG, Shim S, Roth R, Maldazys MR, Heuser JE, Hanson PI
eLife3(2014 May)
ESCRT requirements for EIAV budding.
Sandrin V, Sundquist WI
Retrovirology10104(2013 Oct)
ESCRT-III CHMP2A and CHMP3 form variable helical polymers in vitro and act synergistically during HIV-1 budding.
Effantin G, Dordor A, Sandrin V, Martinelli N, Sundquist WI, Schoehn G, Weissenhorn W
Cellular microbiology15(2)213-26(2013 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Chmp2a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Chmp2a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa08611 | |
Clone ID Related Accession (Same CDS sequence) | NM_001108906.1 , XM_006228118.2 | |
Accession Version | NM_001108906.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 669bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-27 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | charged multivesicular body protein 2a | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474090.1. On or before Oct 4, 2007 this sequence version replaced XM_344860.3, XM_001055138.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: FQ231086.1, FQ232385.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001102376.1 |
CDS | 175..843 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa08611 | |
Clone ID Related Accession (Same CDS sequence) | NM_001108906.1 , XM_006228118.2 | |
Accession Version | XM_006228118.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 669bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | charged multivesicular body protein 2a isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006228118.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006228180.1 |
CDS | 174..842 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa22273 | |
Clone ID Related Accession (Same CDS sequence) | XM_006228117.2 | |
Accession Version | XM_006228117.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 744bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | charged multivesicular body protein 2a isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006228117.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006228179.1 |
CDS | 557..1300 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
LEM2 recruits CHMP7 for ESCRT-mediated nuclear envelope closure in fission yeast and human cells. |
Spastin and ESCRT-III coordinate mitotic spindle disassembly and nuclear envelope sealing. |
Structure of cellular ESCRT-III spirals and their relationship to HIV budding. |
ESCRT requirements for EIAV budding. |
ESCRT-III CHMP2A and CHMP3 form variable helical polymers in vitro and act synergistically during HIV-1 budding. |