Gene Symbol
Chmp2a
Entrez Gene ID
365191
Full Name
charged multivesicular body protein 2A
Synonyms
RGD1305050
General protein information
Preferred Namescharged multivesicular body protein 2A
Namescharged multivesicular body protein 2a chromatin modifying protein 2A
Gene Type
protein-coding
Organism
Rattus norvegicus(Norway rat)
Genome
Chromosome: 1
Map Location: 1q12
mRNA and Protein(s)
mRNA
Protein
Name
NM_001108906.1
NP_001102376.1
charged multivesicular body protein 2a
XM_006228118.2
XP_006228180.1
charged multivesicular body protein 2a isoform X2
XM_006228117.2
XP_006228179.1
charged multivesicular body protein 2a isoform X1
Xenopus tropicalis (tropical clawed frog)
chmp2a
NP_001005008.1
Homo sapiens (human)
CHMP2A
NP_940818.1
Canis lupus familiaris (dog)
CHMP2A
XP_850536.1
Anopheles gambiae (African malaria mosquito)
AgaP_AGAP001285
XP_321862.3
Caenorhabditis elegans (roundworm)
vps-2
NP_496717.1
Schizosaccharomyces pombe (fission yeast)
did4
NP_593871.3
Oryza sativa (rice)
Os07g0236800
NP_001059248.1
Bos taurus (cattle)
CHMP2A
NP_001029722.1
Mus musculus (house mouse)
Chmp2a
NP_081161.1
Rattus norvegicus (Norway rat)
Chmp2a
NP_001102376.1
Danio rerio (zebrafish)
bc2
NP_998682.1
Neurospora crassa
NCU00435
XP_956699.1
Pan troglodytes (chimpanzee)
CHMP2A
XP_003316813.1
CHMP2A
XP_001099219.1
Gallus gallus (chicken)
CHMP2A
NP_001074361.1
Drosophila melanogaster (fruit fly)
vps2
NP_651455.1
Magnaporthe oryzae (rice blast fungus)
MGG_05208
XP_003712753.1
Saccharomyces cerevisiae (baker's yeast)
DID4
NP_012924.2
Kluyveromyces lactis
KLLA0B13343g
XP_452125.1
Eremothecium gossypii
AGOS_ABR002C
NP_982948.1
Arabidopsis thaliana (thale cress)
VPS2.1
NP_565336.1
Related articles in PubMed
LEM2 recruits CHMP7 for ESCRT-mediated nuclear envelope closure in fission yeast and human cells.
Gu M, LaJoie D, Chen OS, von Appen A, Ladinsky MS, Redd MJ, Nikolova L, Bjorkman PJ, Sundquist WI, Ullman KS, Frost A Proceedings of the National Academy of Sciences of the United States of America114(11)E2166-E2175(2017 Mar)
Spastin and ESCRT-III coordinate mitotic spindle disassembly and nuclear envelope sealing.
Vietri M, Schink KO, Campsteijn C, Wegner CS, Schultz SW, Christ L, Thoresen SB, Brech A, Raiborg C, Stenmark H Nature522(7555)231-5(2015 Jun)
Structure of cellular ESCRT-III spirals and their relationship to HIV budding.
Cashikar AG, Shim S, Roth R, Maldazys MR, Heuser JE, Hanson PI eLife3(2014 May)
ESCRT requirements for EIAV budding.
Sandrin V, Sundquist WI Retrovirology10104(2013 Oct)
ESCRT-III CHMP2A and CHMP3 form variable helical polymers in vitro and act synergistically during HIV-1 budding.
Effantin G, Dordor A, Sandrin V, Martinelli N, Sundquist WI, Schoehn G, Weissenhorn W Cellular microbiology15(2)213-26(2013 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Chmp2a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Chmp2a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+ /C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID
ORa08611
Clone ID Related Accession (Same CDS sequence)
NM_001108906.1
, XM_006228118.2
Accession Version
NM_001108906.1 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 669bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2018-05-27
Organism
Rattus norvegicus(Norway rat)
Product
charged multivesicular body protein 2a
Comment
Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474090.1. On or before Oct 4, 2007 this sequence version replaced XM_344860.3, XM_001055138.1.
Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: FQ231086.1, FQ232385.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348]
##Evidence-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG GCCCTGAACC GAGCCATGAG AGAACTGGAC AGGGAACGAC AAAAACTAGA AACCCAGGAA AAGAAAATCA TTGCAGACAT CAAAAAGATG GCAAAGCAAG GCCAGATGGA TGCTGTTCGA ATCATGGCAA AAGACCTGGT GCGTACCCGG CGATATGTGC GCAAGTTTGT GTTGATGCGG GCCAATATCC AGGCTGTGTC CCTCAAGATA CAAACTCTAA AATCCAACAA CTCAATGGCA CAAGCCATGA AGGGTGTTAC TAAGGCCATG GGCACCATGA ACAGACAGCT GAAATTACCC CAGATCCAGA AGATCATGAT GGAGTTTGAA CGGCAGGCAG AGATCATGGA CATGAAGGAA GAAATGATGA ATGATGCCAT TGATGATGCA ATGGGTGATG AGGAAGATGA AGAGGAGAGT GATGCTGTTG TGTCCCAGGT ACTGGATGAG CTGGGACTGA GCCTCACAGA TGAGCTGTCA AACCTCCCCT CCACTGGAGG CTCACTCAGT GTGGCTGCTG GCGGAAAGAA AGCAGAGGCC ACAGCCTCAG CTCTGGCTGA TGCTGATGCA GACCTGGAAG AGAGGCTCAA GAACCTTCGC AGGGACTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
NP_001102376.1
CDS 175..843
Translation
Target ORF information:
RefSeq Version NM_001108906.1
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus charged multivesicular body protein 2A (Chmp2a), mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
NM_001108906.1
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG GCCCTGAACC GAGCCATGAG AGAACTGGAC AGGGAACGAC AAAAACTAGA AACCCAGGAA AAGAAAATCA TTGCAGACAT CAAAAAGATG GCAAAGCAAG GCCAGATGGA TGCTGTTCGA ATCATGGCAA AAGACCTGGT GCGTACCCGG CGATATGTGC GCAAGTTTGT GTTGATGCGG GCCAATATCC AGGCTGTGTC CCTCAAGATA CAAACTCTAA AATCCAACAA CTCAATGGCA CAAGCCATGA AGGGTGTTAC TAAGGCCATG GGCACCATGA ACAGACAGCT GAAATTACCC CAGATCCAGA AGATCATGAT GGAGTTTGAA CGGCAGGCAG AGATCATGGA CATGAAGGAA GAAATGATGA ATGATGCCAT TGATGATGCA ATGGGTGATG AGGAAGATGA AGAGGAGAGT GATGCTGTTG TGTCCCAGGT ACTGGATGAG CTGGGACTGA GCCTCACAGA TGAGCTGTCA AACCTCCCCT CCACTGGAGG CTCACTCAGT GTGGCTGCTG GCGGAAAGAA AGCAGAGGCC ACAGCCTCAG CTCTGGCTGA TGCTGATGCA GACCTGGAAG AGAGGCTCAA GAACCTTCGC AGGGACTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa08611
Clone ID Related Accession (Same CDS sequence)
NM_001108906.1
, XM_006228118.2
Accession Version
XM_006228118.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 669bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
charged multivesicular body protein 2a isoform X2
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jul 26, 2016 this sequence version replaced XM_006228118.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG GCCCTGAACC GAGCCATGAG AGAACTGGAC AGGGAACGAC AAAAACTAGA AACCCAGGAA AAGAAAATCA TTGCAGACAT CAAAAAGATG GCAAAGCAAG GCCAGATGGA TGCTGTTCGA ATCATGGCAA AAGACCTGGT GCGTACCCGG CGATATGTGC GCAAGTTTGT GTTGATGCGG GCCAATATCC AGGCTGTGTC CCTCAAGATA CAAACTCTAA AATCCAACAA CTCAATGGCA CAAGCCATGA AGGGTGTTAC TAAGGCCATG GGCACCATGA ACAGACAGCT GAAATTACCC CAGATCCAGA AGATCATGAT GGAGTTTGAA CGGCAGGCAG AGATCATGGA CATGAAGGAA GAAATGATGA ATGATGCCAT TGATGATGCA ATGGGTGATG AGGAAGATGA AGAGGAGAGT GATGCTGTTG TGTCCCAGGT ACTGGATGAG CTGGGACTGA GCCTCACAGA TGAGCTGTCA AACCTCCCCT CCACTGGAGG CTCACTCAGT GTGGCTGCTG GCGGAAAGAA AGCAGAGGCC ACAGCCTCAG CTCTGGCTGA TGCTGATGCA GACCTGGAAG AGAGGCTCAA GAACCTTCGC AGGGACTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006228180.1
CDS 174..842
Translation
Target ORF information:
RefSeq Version XM_006228118.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus charged multivesicular body protein 2A (Chmp2a), transcript variant X2, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006228118.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG GCCCTGAACC GAGCCATGAG AGAACTGGAC AGGGAACGAC AAAAACTAGA AACCCAGGAA AAGAAAATCA TTGCAGACAT CAAAAAGATG GCAAAGCAAG GCCAGATGGA TGCTGTTCGA ATCATGGCAA AAGACCTGGT GCGTACCCGG CGATATGTGC GCAAGTTTGT GTTGATGCGG GCCAATATCC AGGCTGTGTC CCTCAAGATA CAAACTCTAA AATCCAACAA CTCAATGGCA CAAGCCATGA AGGGTGTTAC TAAGGCCATG GGCACCATGA ACAGACAGCT GAAATTACCC CAGATCCAGA AGATCATGAT GGAGTTTGAA CGGCAGGCAG AGATCATGGA CATGAAGGAA GAAATGATGA ATGATGCCAT TGATGATGCA ATGGGTGATG AGGAAGATGA AGAGGAGAGT GATGCTGTTG TGTCCCAGGT ACTGGATGAG CTGGGACTGA GCCTCACAGA TGAGCTGTCA AACCTCCCCT CCACTGGAGG CTCACTCAGT GTGGCTGCTG GCGGAAAGAA AGCAGAGGCC ACAGCCTCAG CTCTGGCTGA TGCTGATGCA GACCTGGAAG AGAGGCTCAA GAACCTTCGC AGGGACTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
CloneID
ORa22273
Clone ID Related Accession (Same CDS sequence)
XM_006228117.2
Accession Version
XM_006228117.2 Latest version!
Documents for ORF clone product in default vector
Sequence Information
ORF Nucleotide Sequence (Length: 744bp)
Protein sequence
SNP
Vector
pcDNA3.1+ /C-(K)DYK or customized vector
User Manual
Clone information
Clone Map
MSDS
Tag on pcDNA3.1+ /C-(K)DYK
C terminal DYKDDDDK tags
ORF Insert Method
CloneEZ™ Seamless cloning technology
Insert Structure
linear
Update Date
2016-07-25
Organism
Rattus norvegicus(Norway rat)
Product
charged multivesicular body protein 2a isoform X1
Comment
Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process
On Jul 26, 2016 this sequence version replaced XM_006228117.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Rattus norvegicus Annotation Release 106
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Software Version :: 7.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
1 61 121 181 241 301 361 421 481 541 601 661 721 ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG GCCCTGAACC GAGCCATGAG AGAACTGGAC AGGGAACGAC AAAAACTAGA AACCCAGGAA AAGAAAATCA TTGCAGACAT CAAAAAGATG GCAAAGCAAG GCCAGATGGA TGCTGTTCGA ATCATGGCAA AAGACCTGGT GCGTACCCGG CGATATGTGC GCAAGTTTGT GTTGATGCGG GCCAATATCC AGGCTGTGTC CCTCAAGATA CAAACTCTAA AATCCAACAA CTCAATGGCA CAAGCCATGA AGGGTGTTAC TAAGGCCATG GGCACCATGA ACAGACAGGT TTGTCCCTCC CAATCCACTT TCCCATCCCC ATTGACCTTC AGGCAGGTCA CTCACCCTCC CTGCTTCTTC CAGCTGAAAT TACCCCAGAT CCAGAAGATC ATGATGGAGT TTGAACGGCA GGCAGAGATC ATGGACATGA AGGAAGAAAT GATGAATGAT GCCATTGATG ATGCAATGGG TGATGAGGAA GATGAAGAGG AGAGTGATGC TGTTGTGTCC CAGGTACTGG ATGAGCTGGG ACTGAGCCTC ACAGATGAGC TGTCAAACCT CCCCTCCACT GGAGGCTCAC TCAGTGTGGC TGCTGGCGGA AAGAAAGCAG AGGCCACAGC CTCAGCTCTG GCTGATGCTG ATGCAGACCT GGAAGAGAGG CTCAAGAACC TTCGCAGGGA CTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
RefSeq
XP_006228179.1
CDS 557..1300
Translation
Target ORF information:
RefSeq Version XM_006228117.2
Organism Rattus norvegicus(Norway rat)
Definition Rattus norvegicus charged multivesicular body protein 2A (Chmp2a), transcript variant X1, mRNA.
Target ORF information:
Epitope DYKDDDDK
Bacterial selection AMPR
Mammalian selection NeoR
Vector pcDNA3.1+ /C-(K)DYK
XM_006228117.2
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 ATGGACCTGT TGTTTGGGCG CCGGAAGACG CCAGAGGAAC TACTTCGGCA AAACCAGAGG GCCCTGAACC GAGCCATGAG AGAACTGGAC AGGGAACGAC AAAAACTAGA AACCCAGGAA AAGAAAATCA TTGCAGACAT CAAAAAGATG GCAAAGCAAG GCCAGATGGA TGCTGTTCGA ATCATGGCAA AAGACCTGGT GCGTACCCGG CGATATGTGC GCAAGTTTGT GTTGATGCGG GCCAATATCC AGGCTGTGTC CCTCAAGATA CAAACTCTAA AATCCAACAA CTCAATGGCA CAAGCCATGA AGGGTGTTAC TAAGGCCATG GGCACCATGA ACAGACAGGT TTGTCCCTCC CAATCCACTT TCCCATCCCC ATTGACCTTC AGGCAGGTCA CTCACCCTCC CTGCTTCTTC CAGCTGAAAT TACCCCAGAT CCAGAAGATC ATGATGGAGT TTGAACGGCA GGCAGAGATC ATGGACATGA AGGAAGAAAT GATGAATGAT GCCATTGATG ATGCAATGGG TGATGAGGAA GATGAAGAGG AGAGTGATGC TGTTGTGTCC CAGGTACTGG ATGAGCTGGG ACTGAGCCTC ACAGATGAGC TGTCAAACCT CCCCTCCACT GGAGGCTCAC TCAGTGTGGC TGCTGGCGGA AAGAAAGCAG AGGCCACAGC CTCAGCTCTG GCTGATGCTG ATGCAGACCT GGAAGAGAGG CTCAAGAACC TTCGCAGGGA CTGA
The stop codons will be deleted if pcDNA3.1+ /C-(K)DYK vector is selected.
LEM2 recruits CHMP7 for ESCRT-mediated nuclear envelope closure in fission yeast and human cells.
Proceedings of the National Academy of Sciences of the United States of America114(11)E2166-E2175(2017 Mar)
Gu M,LaJoie D,Chen OS,von Appen A,Ladinsky MS,Redd MJ,Nikolova L,Bjorkman PJ,Sundquist WI,Ullman KS,Frost A