| Gene Symbol | Synpo2 |
| Entrez Gene ID | 499702 |
| Full Name | synaptopodin 2 |
| Synonyms | RGD1564779 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Rattus norvegicus(Norway rat) |
| Genome |
gRNAs
The following Synpo2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Synpo2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | ORa59834 | |
| Clone ID Related Accession (Same CDS sequence) | XM_017591045.1 | |
| Accession Version | XM_017591045.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3762bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-07-25 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | synaptopodin-2 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005101.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCAAGGGA GTCAAGCCTA TCGGTCCCCC GGGCCACTGC TCAGGGGAGC TAGAAACTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_017446534.1 |
| CDS | 70..3831 |
| Translation |
Target ORF information:
Target ORF information:
|
 XM_017591045.1 |
1 | ATGCAAGGGA GTCAAGCCTA TCGGTCCCCC GGGCCACTGC TCAGGGGAGC TAGAAACTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | ORa08182 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001191963.1 | |
| Accession Version | NM_001191963.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3789bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-02-23 | |
| Organism | Rattus norvegicus(Norway rat) | |
| Product | synaptopodin-2 | |
| Comment | Comment: INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from AABR07013205.1 and AABR07013204.1. On Jul 17, 2010 this sequence version replaced XM_575030.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA2689595, SAMEA2689596 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGGCACCG GAGATTTCAT CTGCATTTCC ATGACTGGAG GGGCGCCCTG GGGGTTCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001178892.1 |
| CDS | 120..3908 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001191963.1 |
1 | ATGGGCACCG GAGATTTCAT CTGCATTTCC ATGACTGGAG GGGCGCCCTG GGGGTTCAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Prostate cancer cell migration induced by myopodin isoforms is associated with formation of morphologically and biochemically distinct actin networks. |
Cellular mechanotransduction relies on tension-induced and chaperone-assisted autophagy. |
Myopodin isoforms alter the chemokinetic response of PC3 cells in response to different migration stimuli via differential effects on Rho-ROCK signaling pathways. |
Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for ?-Pix in negative regulation of focal adhesion maturation. |
The sarcomeric Z-disc component myopodin is a multiadapter protein that interacts with filamin and alpha-actinin. |
