Gene Symbol | Tsc1 |
Entrez Gene ID | 60445 |
Full Name | TSC complex subunit 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Tsc1 cDNA ORF clone
gRNAs
Gene Symbol | Tsc1 |
Entrez Gene ID | 60445 |
Full Name | TSC complex subunit 1 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_017592016.1 | XP_017447505.1 | hamartin isoform X3 |
XM_006233844.2 | XP_006233906.1 | hamartin isoform X1 |
XM_006233846.2 | XP_006233908.1 | hamartin isoform X1 |
XM_006233845.2 | XP_006233907.1 | hamartin isoform X1 |
XM_006233849.2 | XP_006233911.1 | hamartin isoform X2 |
NM_021854.1 | NP_068626.1 | hamartin |
XM_006233847.3 | XP_006233909.1 | hamartin isoform X1 |
XM_006233843.2 | XP_006233905.1 | hamartin isoform X1 |
Homo sapiens (human) | TSC1 | NP_000359.1 |
Bos taurus (cattle) | TSC1 | XP_005213508.1 |
TSC1 | XP_001103846.2 | |
Mus musculus (house mouse) | Tsc1 | NP_075025.2 |
Xenopus tropicalis (tropical clawed frog) | tsc1 | XP_002944681.2 |
Pan troglodytes (chimpanzee) | TSC1 | XP_001168992.1 |
Gallus gallus (chicken) | TSC1 | XP_415449.2 |
Canis lupus familiaris (dog) | TSC1 | XP_005625233.1 |
Rattus norvegicus (Norway rat) | Tsc1 | NP_068626.1 |
Danio rerio (zebrafish) | tsc1a | NP_956346.1 |
Tumor suppressor Tsc1 is a new Hsp90 co-chaperone that facilitates folding of kinase and non-kinase clients.
Woodford MR, Sager RA, Marris E, Dunn DM, Blanden AR, Murphy RL, Rensing N, Shapiro O, Panaretou B, Prodromou C, Loh SN, Gutmann DH, Bourboulia D, Bratslavsky G, Wong M, Mollapour M
The EMBO journal36(24)3650-3665(2017 12)
Somatic Mutations in TSC1 and TSC2 Cause Focal Cortical Dysplasia.
Lim JS, Gopalappa R, Kim SH, Ramakrishna S, Lee M, Kim WI, Kim J, Park SM, Lee J, Oh JH, Kim HD, Park CH, Lee JS, Kim S, Kim DS, Han JM, Kang HC, Kim HH, Lee JH
American journal of human genetics100(3)454-472(2017 Mar)
Intellectual ability in tuberous sclerosis complex correlates with predicted effects of mutations on TSC1 and TSC2 proteins.
Wong HT, McCartney DL, Lewis JC, Sampson JR, Howe CJ, de Vries PJ
Journal of medical genetics52(12)815-22(2015 Dec)
Survival benefit and phenotypic improvement by hamartin gene therapy in a tuberous sclerosis mouse brain model.
Prabhakar S, Zhang X, Goto J, Han S, Lai C, Bronson R, Sena-Esteves M, Ramesh V, Stemmer-Rachamimov A, Kwiatkowski DJ, Breakefield XO
Neurobiology of disease8222-31(2015 Oct)
Regulation of mTORC1 by PI3K signaling.
Dibble CC, Cantley LC
Trends in cell biology25(9)545-55(2015 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
TSC1 is selectively induced by ischemia in hippocampal CA3 neurons; in CA1 neurons, TSC1 was unaffected by ischemia but was upregulated by ischemic preconditioning preceding ischemia; overexpression of TSC1 increased resistance to oxygen glucose deprivation by inducing productive autophagy
Title: Tsc1 (hamartin) confers neuroprotection against ischemia by inducing autophagy.
Hamartin-Hsp70 plays a crucial role as a scaffolding protein that transfers the Akt signal to tuberin.
Title: Hamartin-Hsp70 interaction is necessary for Akt-dependent tuberin phosphorylation during heat shock.
findings show that endoplasmic reticulum (ER) stress regulates TSC1/TSC2 complex to limit mTOR activity
Title: Tuberous sclerosis complex activity is required to control neuronal stress responses in an mTOR-dependent manner.
These data strongly suggest the effects of Akt/TSC1-TSC2/mTOR signal pathway on hepatocyte growth, protein synthesis and cell cycle, and prove its contribution to liver regeneration.
Title: The variation of AkT/TSC1-TSC1/mTOR signal pathway in hepatocytes after partial hepatectomy in rats.
The TSC1 is thought to be involved in protein translational regulation and cell growth, and loss of their function is a cause of TSC and lymphangioleiomyomatosis (LAM).
Title: TSC2 modulates actin cytoskeleton and focal adhesion through TSC1-binding domain and the Rac1 GTPase.
The following Tsc1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tsc1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa60529 | |
Clone ID Related Accession (Same CDS sequence) | XM_017592016.1 | |
Accession Version | XM_017592016.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3129bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | hamartin isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACACTG ATGTTGTGGT TCTCACAACT GGTGTCTTGG TGTTGATCAC CATGCTACCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017447505.1 |
CDS | 187..3315 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGACACTG ATGTTGTGGT TCTCACAACT GGTGTCTTGG TGTTGATCAC CATGCTACCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa05290 | |
Clone ID Related Accession (Same CDS sequence) | NM_021854.1 | |
Accession Version | NM_021854.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3492bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-09-23 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | hamartin | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB011821.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AB011821.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_068626.1 |
CDS | 1..3492 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa25661 | |
Clone ID Related Accession (Same CDS sequence) | XM_006233844.2 , XM_006233846.2 , XM_006233845.2 , XM_006233847.3 , XM_006233843.2 | |
Accession Version | XM_006233844.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3492bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | hamartin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006233844.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006233906.1 |
CDS | 426..3917 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa25661 | |
Clone ID Related Accession (Same CDS sequence) | XM_006233844.2 , XM_006233846.2 , XM_006233845.2 , XM_006233847.3 , XM_006233843.2 | |
Accession Version | XM_006233846.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3492bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | hamartin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006233846.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006233908.1 |
CDS | 2542..6033 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa25661 | |
Clone ID Related Accession (Same CDS sequence) | XM_006233844.2 , XM_006233846.2 , XM_006233845.2 , XM_006233847.3 , XM_006233843.2 | |
Accession Version | XM_006233845.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3492bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | hamartin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006233845.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006233907.1 |
CDS | 277..3768 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa25661 | |
Clone ID Related Accession (Same CDS sequence) | XM_006233844.2 , XM_006233846.2 , XM_006233845.2 , XM_006233847.3 , XM_006233843.2 | |
Accession Version | XM_006233847.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3492bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | hamartin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006233847.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006233909.1 |
CDS | 209..3700 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa25661 | |
Clone ID Related Accession (Same CDS sequence) | XM_006233844.2 , XM_006233846.2 , XM_006233845.2 , XM_006233847.3 , XM_006233843.2 | |
Accession Version | XM_006233843.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3492bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | hamartin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006233843.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006233905.1 |
CDS | 455..3946 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa25662 | |
Clone ID Related Accession (Same CDS sequence) | XM_006233849.2 | |
Accession Version | XM_006233849.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3477bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | hamartin isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005102.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006233849.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006233911.1 |
CDS | 455..3931 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCCAGC TAGCCAACAT TGGGGAGCTA CTCTCCATGC TGGACTCTTC CACACTGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Tumor suppressor Tsc1 is a new Hsp90 co-chaperone that facilitates folding of kinase and non-kinase clients. |
Somatic Mutations in TSC1 and TSC2 Cause Focal Cortical Dysplasia. |
Intellectual ability in tuberous sclerosis complex correlates with predicted effects of mutations on TSC1 and TSC2 proteins. |
Survival benefit and phenotypic improvement by hamartin gene therapy in a tuberous sclerosis mouse brain model. |
Regulation of mTORC1 by PI3K signaling. |