Gene Symbol | Pcgf5 |
Entrez Gene ID | 681178 |
Full Name | polycomb group ring finger 5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » Pcgf5 cDNA ORF clone
gRNAs
Gene Symbol | Pcgf5 |
Entrez Gene ID | 681178 |
Full Name | polycomb group ring finger 5 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006231311.3 | XP_006231373.1 | polycomb group RING finger protein 5 isoform X2 |
XM_017589707.1 | XP_017445196.1 | polycomb group RING finger protein 5 isoform X1 |
NM_001129882.1 | NP_001123354.1 | polycomb group RING finger protein 5 |
XM_017589708.1 | XP_017445197.1 | polycomb group RING finger protein 5 isoform X1 |
XM_017589709.1 | XP_017445198.1 | polycomb group RING finger protein 5 isoform X1 |
Danio rerio (zebrafish) | pcgf5b | NP_001038700.1 |
LOC697020 | XP_002805794.1 | |
Bos taurus (cattle) | PCGF5 | NP_001071448.1 |
Danio rerio (zebrafish) | pcgf5a | NP_001122184.1 |
Canis lupus familiaris (dog) | PCGF5 | XP_005637589.1 |
Mus musculus (house mouse) | Pcgf5 | NP_083784.1 |
Gallus gallus (chicken) | PCGF5 | NP_001264290.1 |
Homo sapiens (human) | PCGF5 | NP_001243478.1 |
Pan troglodytes (chimpanzee) | PCGF5 | XP_003312724.1 |
Rattus norvegicus (Norway rat) | Pcgf5 | NP_001123354.1 |
Xenopus tropicalis (tropical clawed frog) | pcgf5 | XP_004915945.1 |
PCGF3/5-PRC1 initiates Polycomb recruitment in X chromosome inactivation.
Almeida M, Pintacuda G, Masui O, Koseki Y, Gdula M, Cerase A, Brown D, Mould A, Innocent C, Nakayama M, Schermelleh L, Nesterova TB, Koseki H, Brockdorff N
Science (New York, N.Y.)356(6342)1081-1084(2017 06)
An AUTS2-Polycomb complex activates gene expression in the CNS.
Gao Z, Lee P, Stafford JM, von Schimmelmann M, Schaefer A, Reinberg D
Nature516(7531)349-54(2014 Dec)
PRC1 complex diversity: where is it taking us?
Gil J, O'Loghlen A
Trends in cell biology24(11)632-41(2014 Nov)
Occupying chromatin: Polycomb mechanisms for getting to genomic targets, stopping transcriptional traffic, and staying put.
Simon JA, Kingston RE
Molecular cell49(5)808-24(2013 Mar)
Interaction proteomics analysis of polycomb proteins defines distinct PRC1 complexes in mammalian cells.
Vandamme J, V?lkel P, Rosnoblet C, Le Faou P, Angrand PO
Molecular & cellular proteomics : MCP10(4)M110.002642(2011 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Pcgf5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pcgf5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa02232 | |
Clone ID Related Accession (Same CDS sequence) | XM_006231311.3 , NM_001129882.1 | |
Accession Version | NM_001129882.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 711bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-27 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | polycomb group RING finger protein 5 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC167067.1. On or before Jul 10, 2008 this sequence version replaced XM_001080537.1, XM_001080543.1, XM_001080549.1. ##Evidence-Data-START## Transcript exon combination :: BC167067.1, FQ214233.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTACCC AAAGGAAACA CTTGGTGAAA GATTTCAACC CGTACATCAC CTGCTACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001123354.1 |
CDS | 303..1013 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTACCC AAAGGAAACA CTTGGTGAAA GATTTCAACC CGTACATCAC CTGCTACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa02232 | |
Clone ID Related Accession (Same CDS sequence) | XM_006231311.3 , NM_001129882.1 | |
Accession Version | XM_006231311.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 711bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | polycomb group RING finger protein 5 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006231311.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTACCC AAAGGAAACA CTTGGTGAAA GATTTCAACC CGTACATCAC CTGCTACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006231373.1 |
CDS | 393..1103 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTACCC AAAGGAAACA CTTGGTGAAA GATTTCAACC CGTACATCAC CTGCTACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa24048 | |
Clone ID Related Accession (Same CDS sequence) | XM_017589707.1 , XM_017589708.1 , XM_017589709.1 | |
Accession Version | XM_017589707.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | polycomb group RING finger protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTACCC AAAGGAAACA CTTGGTGAAA GATTTCAACC CGTACATCAC CTGCTACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017445196.1 |
CDS | 395..1156 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTACCC AAAGGAAACA CTTGGTGAAA GATTTCAACC CGTACATCAC CTGCTACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa24048 | |
Clone ID Related Accession (Same CDS sequence) | XM_017589707.1 , XM_017589708.1 , XM_017589709.1 | |
Accession Version | XM_017589708.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | polycomb group RING finger protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTACCC AAAGGAAACA CTTGGTGAAA GATTTCAACC CGTACATCAC CTGCTACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017445197.1 |
CDS | 404..1165 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTACCC AAAGGAAACA CTTGGTGAAA GATTTCAACC CGTACATCAC CTGCTACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa24048 | |
Clone ID Related Accession (Same CDS sequence) | XM_017589707.1 , XM_017589708.1 , XM_017589709.1 | |
Accession Version | XM_017589709.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | polycomb group RING finger protein 5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTACCC AAAGGAAACA CTTGGTGAAA GATTTCAACC CGTACATCAC CTGCTACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017445198.1 |
CDS | 390..1151 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTACCC AAAGGAAACA CTTGGTGAAA GATTTCAACC CGTACATCAC CTGCTACATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
PCGF3/5-PRC1 initiates Polycomb recruitment in X chromosome inactivation. |
An AUTS2-Polycomb complex activates gene expression in the CNS. |
PRC1 complex diversity: where is it taking us? |
Occupying chromatin: Polycomb mechanisms for getting to genomic targets, stopping transcriptional traffic, and staying put. |
Interaction proteomics analysis of polycomb proteins defines distinct PRC1 complexes in mammalian cells. |