Gene Symbol | LOC689986 |
Entrez Gene ID | 689986 |
Full Name | hypothetical protein LOC689986 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
ORF » Species Summary » Rattus norvegicus » LOC689986 cDNA ORF clone
Gene Symbol | LOC689986 |
Entrez Gene ID | 689986 |
Full Name | hypothetical protein LOC689986 |
General protein information |
|
Gene Type | protein-coding |
Organism | Rattus norvegicus(Norway rat) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_006250581.3 | XP_006250643.1 | uncharacterized protein C1orf146 homolog isoform X2 |
XM_006250572.3 | XP_006250634.1 | uncharacterized protein C1orf146 homolog isoform X1 |
XM_017599384.1 | XP_017454873.1 | uncharacterized protein C1orf146 homolog isoform X1 |
XM_006250574.3 | XP_006250636.1 | uncharacterized protein C1orf146 homolog isoform X1 |
XM_006250576.3 | XP_006250638.1 | uncharacterized protein C1orf146 homolog isoform X1 |
NM_001109563.1 | NP_001103033.1 | uncharacterized protein C1orf146 homolog |
XM_008769942.2 | XP_008768164.1 | uncharacterized protein C1orf146 homolog isoform X1 |
XM_006250573.3 | XP_006250635.1 | uncharacterized protein C1orf146 homolog isoform X1 |
XM_006250575.3 | XP_006250637.1 | uncharacterized protein C1orf146 homolog isoform X1 |
Pan troglodytes (chimpanzee) | C1H1orf146 | XP_513558.1 |
Xenopus tropicalis (tropical clawed frog) | LOC101733338 | XP_004914331.1 |
Rattus norvegicus (Norway rat) | LOC689986 | NP_001103033.1 |
Danio rerio (zebrafish) | gb:ex154042 | XP_688855.1 |
LOC706033 | XP_001098878.1 | |
Canis lupus familiaris (dog) | C6H1orf146 | XP_005621984.1 |
Mus musculus (house mouse) | 1700028K03Rik | NP_877422.1 |
Homo sapiens (human) | C1orf146 | NP_001012425.1 |
Bos taurus (cattle) | C3H1orf146 | NP_001033113.1 |
Gallus gallus (chicken) | C1ORF146 | NP_001264582.1 |
LOC689986, a unique gene showing specific expression in restricted areas of the rodent neocortex.
Ersland KM, H?vik B, Rinholm JE, Gundersen V, Stansberg C, Steen VM
BMC neuroscience1468(2013 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
This study identified distinct sets of differentially expressed genes. One of these genes, namely the hypothetical protein LOC689986 (LOC689986), was of particular interest, due to an almost exclusive expression in the temporal cortex.
Title: LOC689986, a unique gene showing specific expression in restricted areas of the rodent neocortex.
The following LOC689986 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC689986 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ORa10348 | |
Clone ID Related Accession (Same CDS sequence) | NM_001109563.1 | |
Accession Version | NM_001109563.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 558bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-07-20 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uncharacterized protein C1orf146 homolog | |
Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from CH474079.2. On Oct 4, 2007 this sequence version replaced XM_001072809.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001103033.1 |
CDS | 2279..2836 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001109563.1 |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35810 | |
Clone ID Related Accession (Same CDS sequence) | XM_006250572.3 , XM_017599384.1 , XM_006250574.3 , XM_006250576.3 , XM_008769942.2 , XM_006250573.3 , XM_006250575.3 | |
Accession Version | XM_006250572.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 615bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uncharacterized protein C1orf146 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006250572.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006250634.1 |
CDS | 712..1326 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006250572.3 |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35810 | |
Clone ID Related Accession (Same CDS sequence) | XM_006250572.3 , XM_017599384.1 , XM_006250574.3 , XM_006250576.3 , XM_008769942.2 , XM_006250573.3 , XM_006250575.3 | |
Accession Version | XM_017599384.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 615bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uncharacterized protein C1orf146 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017454873.1 |
CDS | 863..1477 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017599384.1 |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35810 | |
Clone ID Related Accession (Same CDS sequence) | XM_006250572.3 , XM_017599384.1 , XM_006250574.3 , XM_006250576.3 , XM_008769942.2 , XM_006250573.3 , XM_006250575.3 | |
Accession Version | XM_006250574.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 615bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uncharacterized protein C1orf146 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006250574.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006250636.1 |
CDS | 616..1230 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006250574.3 |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35810 | |
Clone ID Related Accession (Same CDS sequence) | XM_006250572.3 , XM_017599384.1 , XM_006250574.3 , XM_006250576.3 , XM_008769942.2 , XM_006250573.3 , XM_006250575.3 | |
Accession Version | XM_006250576.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 615bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uncharacterized protein C1orf146 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006250576.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006250638.1 |
CDS | 468..1082 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006250576.3 |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35810 | |
Clone ID Related Accession (Same CDS sequence) | XM_006250572.3 , XM_017599384.1 , XM_006250574.3 , XM_006250576.3 , XM_008769942.2 , XM_006250573.3 , XM_006250575.3 | |
Accession Version | XM_008769942.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 615bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uncharacterized protein C1orf146 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008769942.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008768164.1 |
CDS | 762..1376 |
Translation |
Target ORF information:
Target ORF information:
|
XM_008769942.2 |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35810 | |
Clone ID Related Accession (Same CDS sequence) | XM_006250572.3 , XM_017599384.1 , XM_006250574.3 , XM_006250576.3 , XM_008769942.2 , XM_006250573.3 , XM_006250575.3 | |
Accession Version | XM_006250573.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 615bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uncharacterized protein C1orf146 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006250573.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006250635.1 |
CDS | 718..1332 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006250573.3 |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35810 | |
Clone ID Related Accession (Same CDS sequence) | XM_006250572.3 , XM_017599384.1 , XM_006250574.3 , XM_006250576.3 , XM_008769942.2 , XM_006250573.3 , XM_006250575.3 | |
Accession Version | XM_006250575.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 615bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uncharacterized protein C1orf146 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006250575.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006250637.1 |
CDS | 564..1178 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006250575.3 |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ORa35811 | |
Clone ID Related Accession (Same CDS sequence) | XM_006250581.3 | |
Accession Version | XM_006250581.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 495bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-07-25 | |
Organism | Rattus norvegicus(Norway rat) | |
Product | uncharacterized protein C1orf146 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006250581.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_006250643.1 |
CDS | 731..1225 |
Translation |
Target ORF information:
Target ORF information:
|
XM_006250581.3 |
1 | ATGTCAATGG ATGGGCGTGG TGGGAAAGAA AGAGCAAAAT GGACAACCAC CATTATTATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
LOC689986, a unique gene showing specific expression in restricted areas of the rodent neocortex. |