Ciita cDNA ORF clone, Rattus norvegicus(Norway rat)

The following Ciita gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ciita cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ORa09812 NM_053529.2
Latest version!
Rattus norvegicus class II, major histocompatibility complex, transactivator (Ciita), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 20 $559.30
$799.00
ORa09833 NM_001270803.1
Latest version!
Rattus norvegicus class II, major histocompatibility complex, transactivator (Ciita), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 20 $559.30
$799.00
ORa09836 NM_001270804.1
Latest version!
Rattus norvegicus class II, major histocompatibility complex, transactivator (Ciita), transcript variant 3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 20 $559.30
$799.00
ORa09812 XM_006245738.3
Latest version!
Rattus norvegicus class II, major histocompatibility complex, transactivator (Ciita), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 20 $559.30
$799.00
ORa09836 XM_008767501.2
Latest version!
Rattus norvegicus class II, major histocompatibility complex, transactivator (Ciita), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 20 $559.30
$799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID ORa09812
    Clone ID Related Accession (Same CDS sequence) NM_053529.2 , XM_006245738.3
    Accession Version NM_053529.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3462bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-05-20
    Organism Rattus norvegicus(Norway rat)
    Product MHC class II transactivator isoform 1
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC103514.7. On Aug 2, 2012 this sequence version replaced NM_053529.1. Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF251305.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    ATGAACCACT TCCAGGCCAT CCTGGCCCAG GTGCAGACAC TGCTGTCCAG TCAGCAGCCC 
    AGGCAGGTGC GGGCCCTCCT GGATGGCTTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC
    CATTGTGCCC TGCTTCATGA GCCTGATGGT GAGGCTCTGG CCCGGAAGAT TTCCCTCACC
    TTGCTGGAGA AAGGGGACCT GGACTTGGCG TTTGTGAGCT GGGTTTGCAA CAGGCTGCAG
    GTCCCTGAGG TAGAGAGGGG CCCCAACTGC AGGGACCATG GAGGCCATAC TCTGTGTGCC
    ACCATGGAGC TGGGGTCTCC AGAGGGCAGC TACCTGGAGC TCCTTAACAG TGATGCTGAC
    CCCCTACACC TCTACCACCT CTATGACCAG ATGGACCTTG CTGGGGAGGA AGAGATCGAA
    CTCAACTCAG AGACAGACAT GGACACCATC AACTGTGACC AGTTCAGCAA GCTGTTGCAG
    GATATGGAAA TGGATGAAGA GACCCGGGAG GCCTATGCCA ATATCGCGGA ACTGGATCAG
    TACGTGTTCC AGGATACCCA GCTGGAGGGC CTGAGCAAGG ACCTCTTCAT ACAGCACATT
    GGACCAGAGG AAGGCTTTGG TGAGAACGTA GAGGGCCCTG CAGAATCAGG AGAGAAGCCT
    CAGAAGAGAC GCTTCCCAGA AGAGCATGCT ATGGACTCAA AGCACAGGAA ACTAGTGCCT
    CCCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCGCTG GGCATATCCA GATCTTCACC
    ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGTTGGCA CAGGGCTCTC CAGTGTCCTA
    GTCTACCACG GTGAGATGCC CCAGGTCAAC CAATTACTCT CTTCAAGCAG CCCCACTGTC
    CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCGC GCCATCCACA
    GCTGACCTGC CCGGCATGCC TGAACCTGCT CTGACCTCCC GTGTAAATGA GACAGAGGAC
    ACAACACCCC CCTCCCCATG CCAAGAGGAT CCCGAGCCTT CCATCAAGCT TCCAAAATGG
    CCAGAGTCCG TGGAGCGGTT CCAGCACTCC CTACAGGACA AGTACCAAGC ACTGCCCGGG
    AGCCCAAGTG GTCCTCTGGT AGCCATGGAG CTGGTGCGGG CCAGGTTGGA AAGAGGTAGC
    AACAAGAGTC AGGAAAGGGA GCTGGCCACT CCTGACTGGA CAGAGCGCCA GCTAGCCCAT
    GGCGGTCTGG CCGAGGTACT TCGGGTTGTC GGCGACTCCA GGAGATCACG AGAGACACAG
    GTGGTCGCTG TGCTGGGCAA GGCTGGTCAG GGCAAGAGCC ACTGGGCCAG GACAGTGAGC
    CACATTTGGG CACAAGGCCA GTTACCACAA TATGACTTTG TCTTCTACGT CCCCTGTCAA
    TGCTTGGATC GCCCTGGGGA CACCTACCAC CTGCGGGATC TGCTCTGTCC CCCGAACCTG
    CAGCCACTGG CCATGGATGA CGAGGTCATT GATCATATTG TGAGGCAGCC GGACCGTGTT
    CTGCTCATCC TAGATGCTTT TGAGGAGCTA GAGGCCCAAG ACAGCCTCCT GCATGGACCC
    TGTGGACCTC TGTCCCCAGA GCCCTGCTCC CTCCGGGGAC TGCTGGCTGG GCTCTTCCAG
    CGTAAGCTGC TGCGAGGCTG CACCCTGCTC CTCACAGCCC GGCCCCGGGG CCGCCTGGCT
    CAGAGCCTGA GCAAGGCAGA TGCCATCTTC GAGGTGCCCA GCTTCTCTAC GAAACAGGCC
    CAGATCTATA TGAGGCACTA CTTTGAGAAC TCAGGGACAG CAGGGAGTCA CGACAAGGCC
    CTGGGCCTCC TGGAGGGCCA GCCTTTTCTC CTCACCCACA GTCACAGCCC TGTTCTGTGC
    AGTGCCGTGT GTCAGCTCTC CAAGGCCCTG CTGGATCAGG GCGCAGAGGC CCAGCTACCT
    TGCACACTCA CAGGACTCTA TGTTGGCCTG CTAGGCCCTG CAGCTCAGAA CAGTCCTCCT
    GGAGCCTTAG TTGAGTTGGC CAAGCTAGCC TGGGAGCTGG GACGGAGGCA CCAAAGCACC
    TTGCAGGAAA CCCAGTTTCC ATCCGTGGAA GTGAAGACCT GGGCTGTGGC CCAAGGCTTG
    ATGCAGCAGA CCACAGAGGC CCAACTGGCT TTCTCCAGTT TTCTGCTACA GTGCTTCCTG
    GGTGCTGTGT GGCTGGCACA GTGCAATGAG ATGAAAGACA AGGAGCTGCC ACAGTACCTG
    GCCTTGACCC CGAGGAAGAA GCGACCCTAT GACAACTGGC TGGAGGGCGT ACCACGCTTT
    CTGGCTGGCT TAGTTTTCCA GCCTCGAGCC CACTGCCTGG GAGCTCTGGT GGAGCCTGCA
    ATGGCTGCAG TGGCAGATAG GAAACGGAAG GTTCTTACCA GGTACCTGAA GCGCTTGAAG
    CTGGGGACAC TTCGGGCCGG GAGGTTGCTG GAGCTGCTAC ACTGTGCCCA CGAAACACAG
    GAACCTGGTA TTTGGAAGCA TGTTTCACAC CAGCTCCCAG GGCACCTCTC CTTCCTGGGC
    ACACGGCTCA CAGCCCCAGA TGTGTATGTT CTGGGCAGGG CCTTGGAGAC AGCCAGCCAG
    GACTTCTCCT TGGACCTTCG TCAGACTGGC ATCGAGCCCT CCAGACTGGG AGACCTCGTG
    GGACTCAGCT GTGTCACCAG TTTCAGGGCC TCCTTGAGTG ACACAATGGC ATTATGGGAG
    TCCCTACAGC ATCAGGGAGA AACCCAGCTA CTCCAGGCGG CAGAGGAGAA GTTCACCATT
    GAGCCATTTA AGGCCAAATC CCCAAAGGAT GTGGAAGACC TGGACAGCCT TGTGCAGACC
    CAGAGGCTGA GAAACCCCTC AGCGGATGCA GCCAAGGATC TTCCTGCCAT CCGGGACCTT
    AAGAAGCTAG AGTTTGCATT GGGCCCCGTC TTGGGCCCGC AGGCTTTCCC CACACTGGCC
    AAGATCCTTC CAGCATTCTC TTCCCTGCAG CACCTGGACC TGGACTCACT TAGCGAGAAC
    AAGATCGGGG ACAAGGGTGT GTCGAAGCTC TCAGCCACCT TCCCTCAGCT GAAGGCCCTG
    GAGACGCTCA ACCTGTCCCA GAATAGCATC ACCGATGTGG GAGCTTGCAA GCTTGCAGAA
    GCCCTGCCGG CCCTGGCCAA GTCCCTCCTA AGGCTGAGCT TGTACAACAA CTGCATCTGT
    GACGAAGGGG CCAAGAGCCT GGCACGAGTG CTTCCAGACA TGGTGTCCCT CCGGGTGATG
    GATGTCCAGT TCAACAAGTT CACGGCTGTC GGGGCCCAGC AGCTGACCTC CAGCCTTCAG
    AAGTGCCCTC AGGTGGAGAC ACTGGCAATG TGGACACCCA CTATCCCCTT TGGGGTCCAG
    GAACACCTGC AGCAGCTGGA TGCCCGGATT AGCCTGAGAT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_445981.2
    CDS83..3544
    Translation

    Target ORF information:

    RefSeq Version NM_053529.2
    Organism Rattus norvegicus(Norway rat)
    Definition Rattus norvegicus class II, major histocompatibility complex, transactivator (Ciita), transcript variant 1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_053529.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    ATGAACCACT TCCAGGCCAT CCTGGCCCAG GTGCAGACAC TGCTGTCCAG TCAGCAGCCC 
    AGGCAGGTGC GGGCCCTCCT GGATGGCTTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC
    CATTGTGCCC TGCTTCATGA GCCTGATGGT GAGGCTCTGG CCCGGAAGAT TTCCCTCACC
    TTGCTGGAGA AAGGGGACCT GGACTTGGCG TTTGTGAGCT GGGTTTGCAA CAGGCTGCAG
    GTCCCTGAGG TAGAGAGGGG CCCCAACTGC AGGGACCATG GAGGCCATAC TCTGTGTGCC
    ACCATGGAGC TGGGGTCTCC AGAGGGCAGC TACCTGGAGC TCCTTAACAG TGATGCTGAC
    CCCCTACACC TCTACCACCT CTATGACCAG ATGGACCTTG CTGGGGAGGA AGAGATCGAA
    CTCAACTCAG AGACAGACAT GGACACCATC AACTGTGACC AGTTCAGCAA GCTGTTGCAG
    GATATGGAAA TGGATGAAGA GACCCGGGAG GCCTATGCCA ATATCGCGGA ACTGGATCAG
    TACGTGTTCC AGGATACCCA GCTGGAGGGC CTGAGCAAGG ACCTCTTCAT ACAGCACATT
    GGACCAGAGG AAGGCTTTGG TGAGAACGTA GAGGGCCCTG CAGAATCAGG AGAGAAGCCT
    CAGAAGAGAC GCTTCCCAGA AGAGCATGCT ATGGACTCAA AGCACAGGAA ACTAGTGCCT
    CCCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCGCTG GGCATATCCA GATCTTCACC
    ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGTTGGCA CAGGGCTCTC CAGTGTCCTA
    GTCTACCACG GTGAGATGCC CCAGGTCAAC CAATTACTCT CTTCAAGCAG CCCCACTGTC
    CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCGC GCCATCCACA
    GCTGACCTGC CCGGCATGCC TGAACCTGCT CTGACCTCCC GTGTAAATGA GACAGAGGAC
    ACAACACCCC CCTCCCCATG CCAAGAGGAT CCCGAGCCTT CCATCAAGCT TCCAAAATGG
    CCAGAGTCCG TGGAGCGGTT CCAGCACTCC CTACAGGACA AGTACCAAGC ACTGCCCGGG
    AGCCCAAGTG GTCCTCTGGT AGCCATGGAG CTGGTGCGGG CCAGGTTGGA AAGAGGTAGC
    AACAAGAGTC AGGAAAGGGA GCTGGCCACT CCTGACTGGA CAGAGCGCCA GCTAGCCCAT
    GGCGGTCTGG CCGAGGTACT TCGGGTTGTC GGCGACTCCA GGAGATCACG AGAGACACAG
    GTGGTCGCTG TGCTGGGCAA GGCTGGTCAG GGCAAGAGCC ACTGGGCCAG GACAGTGAGC
    CACATTTGGG CACAAGGCCA GTTACCACAA TATGACTTTG TCTTCTACGT CCCCTGTCAA
    TGCTTGGATC GCCCTGGGGA CACCTACCAC CTGCGGGATC TGCTCTGTCC CCCGAACCTG
    CAGCCACTGG CCATGGATGA CGAGGTCATT GATCATATTG TGAGGCAGCC GGACCGTGTT
    CTGCTCATCC TAGATGCTTT TGAGGAGCTA GAGGCCCAAG ACAGCCTCCT GCATGGACCC
    TGTGGACCTC TGTCCCCAGA GCCCTGCTCC CTCCGGGGAC TGCTGGCTGG GCTCTTCCAG
    CGTAAGCTGC TGCGAGGCTG CACCCTGCTC CTCACAGCCC GGCCCCGGGG CCGCCTGGCT
    CAGAGCCTGA GCAAGGCAGA TGCCATCTTC GAGGTGCCCA GCTTCTCTAC GAAACAGGCC
    CAGATCTATA TGAGGCACTA CTTTGAGAAC TCAGGGACAG CAGGGAGTCA CGACAAGGCC
    CTGGGCCTCC TGGAGGGCCA GCCTTTTCTC CTCACCCACA GTCACAGCCC TGTTCTGTGC
    AGTGCCGTGT GTCAGCTCTC CAAGGCCCTG CTGGATCAGG GCGCAGAGGC CCAGCTACCT
    TGCACACTCA CAGGACTCTA TGTTGGCCTG CTAGGCCCTG CAGCTCAGAA CAGTCCTCCT
    GGAGCCTTAG TTGAGTTGGC CAAGCTAGCC TGGGAGCTGG GACGGAGGCA CCAAAGCACC
    TTGCAGGAAA CCCAGTTTCC ATCCGTGGAA GTGAAGACCT GGGCTGTGGC CCAAGGCTTG
    ATGCAGCAGA CCACAGAGGC CCAACTGGCT TTCTCCAGTT TTCTGCTACA GTGCTTCCTG
    GGTGCTGTGT GGCTGGCACA GTGCAATGAG ATGAAAGACA AGGAGCTGCC ACAGTACCTG
    GCCTTGACCC CGAGGAAGAA GCGACCCTAT GACAACTGGC TGGAGGGCGT ACCACGCTTT
    CTGGCTGGCT TAGTTTTCCA GCCTCGAGCC CACTGCCTGG GAGCTCTGGT GGAGCCTGCA
    ATGGCTGCAG TGGCAGATAG GAAACGGAAG GTTCTTACCA GGTACCTGAA GCGCTTGAAG
    CTGGGGACAC TTCGGGCCGG GAGGTTGCTG GAGCTGCTAC ACTGTGCCCA CGAAACACAG
    GAACCTGGTA TTTGGAAGCA TGTTTCACAC CAGCTCCCAG GGCACCTCTC CTTCCTGGGC
    ACACGGCTCA CAGCCCCAGA TGTGTATGTT CTGGGCAGGG CCTTGGAGAC AGCCAGCCAG
    GACTTCTCCT TGGACCTTCG TCAGACTGGC ATCGAGCCCT CCAGACTGGG AGACCTCGTG
    GGACTCAGCT GTGTCACCAG TTTCAGGGCC TCCTTGAGTG ACACAATGGC ATTATGGGAG
    TCCCTACAGC ATCAGGGAGA AACCCAGCTA CTCCAGGCGG CAGAGGAGAA GTTCACCATT
    GAGCCATTTA AGGCCAAATC CCCAAAGGAT GTGGAAGACC TGGACAGCCT TGTGCAGACC
    CAGAGGCTGA GAAACCCCTC AGCGGATGCA GCCAAGGATC TTCCTGCCAT CCGGGACCTT
    AAGAAGCTAG AGTTTGCATT GGGCCCCGTC TTGGGCCCGC AGGCTTTCCC CACACTGGCC
    AAGATCCTTC CAGCATTCTC TTCCCTGCAG CACCTGGACC TGGACTCACT TAGCGAGAAC
    AAGATCGGGG ACAAGGGTGT GTCGAAGCTC TCAGCCACCT TCCCTCAGCT GAAGGCCCTG
    GAGACGCTCA ACCTGTCCCA GAATAGCATC ACCGATGTGG GAGCTTGCAA GCTTGCAGAA
    GCCCTGCCGG CCCTGGCCAA GTCCCTCCTA AGGCTGAGCT TGTACAACAA CTGCATCTGT
    GACGAAGGGG CCAAGAGCCT GGCACGAGTG CTTCCAGACA TGGTGTCCCT CCGGGTGATG
    GATGTCCAGT TCAACAAGTT CACGGCTGTC GGGGCCCAGC AGCTGACCTC CAGCCTTCAG
    AAGTGCCCTC AGGTGGAGAC ACTGGCAATG TGGACACCCA CTATCCCCTT TGGGGTCCAG
    GAACACCTGC AGCAGCTGGA TGCCCGGATT AGCCTGAGAT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ORa09833
    Clone ID Related Accession (Same CDS sequence) NM_001270803.1
    Accession Version NM_001270803.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3222bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-05-20
    Organism Rattus norvegicus(Norway rat)
    Product MHC class II transactivator isoform 2
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC103514.7. Transcript Variant: This variant (2) has an alternate first exon compared to variant 1. The resulting isoform (2) has a shorter and distinct N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF251306.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    ATGCGCTGCC AGGTTCCCGG CCCTTCTGGG TCTTACCTGC AAGGCCATAC TCTGTGTGCC 
    ACCATGGAGC TGGGGTCTCC AGAGGGCAGC TACCTGGAGC TCCTTAACAG TGATGCTGAC
    CCCCTACACC TCTACCACCT CTATGACCAG ATGGACCTTG CTGGGGAGGA AGAGATCGAA
    CTCAACTCAG AGACAGACAT GGACACCATC AACTGTGACC AGTTCAGCAA GCTGTTGCAG
    GATATGGAAA TGGATGAAGA GACCCGGGAG GCCTATGCCA ATATCGCGGA ACTGGATCAG
    TACGTGTTCC AGGATACCCA GCTGGAGGGC CTGAGCAAGG ACCTCTTCAT ACAGCACATT
    GGACCAGAGG AAGGCTTTGG TGAGAACGTA GAGGGCCCTG CAGAATCAGG AGAGAAGCCT
    CAGAAGAGAC GCTTCCCAGA AGAGCATGCT ATGGACTCAA AGCACAGGAA ACTAGTGCCT
    CCCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCGCTG GGCATATCCA GATCTTCACC
    ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGTTGGCA CAGGGCTCTC CAGTGTCCTA
    GTCTACCACG GTGAGATGCC CCAGGTCAAC CAATTACTCT CTTCAAGCAG CCCCACTGTC
    CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCGC GCCATCCACA
    GCTGACCTGC CCGGCATGCC TGAACCTGCT CTGACCTCCC GTGTAAATGA GACAGAGGAC
    ACAACACCCC CCTCCCCATG CCAAGAGGAT CCCGAGCCTT CCATCAAGCT TCCAAAATGG
    CCAGAGTCCG TGGAGCGGTT CCAGCACTCC CTACAGGACA AGTACCAAGC ACTGCCCGGG
    AGCCCAAGTG GTCCTCTGGT AGCCATGGAG CTGGTGCGGG CCAGGTTGGA AAGAGGTAGC
    AACAAGAGTC AGGAAAGGGA GCTGGCCACT CCTGACTGGA CAGAGCGCCA GCTAGCCCAT
    GGCGGTCTGG CCGAGGTACT TCGGGTTGTC GGCGACTCCA GGAGATCACG AGAGACACAG
    GTGGTCGCTG TGCTGGGCAA GGCTGGTCAG GGCAAGAGCC ACTGGGCCAG GACAGTGAGC
    CACATTTGGG CACAAGGCCA GTTACCACAA TATGACTTTG TCTTCTACGT CCCCTGTCAA
    TGCTTGGATC GCCCTGGGGA CACCTACCAC CTGCGGGATC TGCTCTGTCC CCCGAACCTG
    CAGCCACTGG CCATGGATGA CGAGGTCATT GATCATATTG TGAGGCAGCC GGACCGTGTT
    CTGCTCATCC TAGATGCTTT TGAGGAGCTA GAGGCCCAAG ACAGCCTCCT GCATGGACCC
    TGTGGACCTC TGTCCCCAGA GCCCTGCTCC CTCCGGGGAC TGCTGGCTGG GCTCTTCCAG
    CGTAAGCTGC TGCGAGGCTG CACCCTGCTC CTCACAGCCC GGCCCCGGGG CCGCCTGGCT
    CAGAGCCTGA GCAAGGCAGA TGCCATCTTC GAGGTGCCCA GCTTCTCTAC GAAACAGGCC
    CAGATCTATA TGAGGCACTA CTTTGAGAAC TCAGGGACAG CAGGGAGTCA CGACAAGGCC
    CTGGGCCTCC TGGAGGGCCA GCCTTTTCTC CTCACCCACA GTCACAGCCC TGTTCTGTGC
    AGTGCCGTGT GTCAGCTCTC CAAGGCCCTG CTGGATCAGG GCGCAGAGGC CCAGCTACCT
    TGCACACTCA CAGGACTCTA TGTTGGCCTG CTAGGCCCTG CAGCTCAGAA CAGTCCTCCT
    GGAGCCTTAG TTGAGTTGGC CAAGCTAGCC TGGGAGCTGG GACGGAGGCA CCAAAGCACC
    TTGCAGGAAA CCCAGTTTCC ATCCGTGGAA GTGAAGACCT GGGCTGTGGC CCAAGGCTTG
    ATGCAGCAGA CCACAGAGGC CCAACTGGCT TTCTCCAGTT TTCTGCTACA GTGCTTCCTG
    GGTGCTGTGT GGCTGGCACA GTGCAATGAG ATGAAAGACA AGGAGCTGCC ACAGTACCTG
    GCCTTGACCC CGAGGAAGAA GCGACCCTAT GACAACTGGC TGGAGGGCGT ACCACGCTTT
    CTGGCTGGCT TAGTTTTCCA GCCTCGAGCC CACTGCCTGG GAGCTCTGGT GGAGCCTGCA
    ATGGCTGCAG TGGCAGATAG GAAACGGAAG GTTCTTACCA GGTACCTGAA GCGCTTGAAG
    CTGGGGACAC TTCGGGCCGG GAGGTTGCTG GAGCTGCTAC ACTGTGCCCA CGAAACACAG
    GAACCTGGTA TTTGGAAGCA TGTTTCACAC CAGCTCCCAG GGCACCTCTC CTTCCTGGGC
    ACACGGCTCA CAGCCCCAGA TGTGTATGTT CTGGGCAGGG CCTTGGAGAC AGCCAGCCAG
    GACTTCTCCT TGGACCTTCG TCAGACTGGC ATCGAGCCCT CCAGACTGGG AGACCTCGTG
    GGACTCAGCT GTGTCACCAG TTTCAGGGCC TCCTTGAGTG ACACAATGGC ATTATGGGAG
    TCCCTACAGC ATCAGGGAGA AACCCAGCTA CTCCAGGCGG CAGAGGAGAA GTTCACCATT
    GAGCCATTTA AGGCCAAATC CCCAAAGGAT GTGGAAGACC TGGACAGCCT TGTGCAGACC
    CAGAGGCTGA GAAACCCCTC AGCGGATGCA GCCAAGGATC TTCCTGCCAT CCGGGACCTT
    AAGAAGCTAG AGTTTGCATT GGGCCCCGTC TTGGGCCCGC AGGCTTTCCC CACACTGGCC
    AAGATCCTTC CAGCATTCTC TTCCCTGCAG CACCTGGACC TGGACTCACT TAGCGAGAAC
    AAGATCGGGG ACAAGGGTGT GTCGAAGCTC TCAGCCACCT TCCCTCAGCT GAAGGCCCTG
    GAGACGCTCA ACCTGTCCCA GAATAGCATC ACCGATGTGG GAGCTTGCAA GCTTGCAGAA
    GCCCTGCCGG CCCTGGCCAA GTCCCTCCTA AGGCTGAGCT TGTACAACAA CTGCATCTGT
    GACGAAGGGG CCAAGAGCCT GGCACGAGTG CTTCCAGACA TGGTGTCCCT CCGGGTGATG
    GATGTCCAGT TCAACAAGTT CACGGCTGTC GGGGCCCAGC AGCTGACCTC CAGCCTTCAG
    AAGTGCCCTC AGGTGGAGAC ACTGGCAATG TGGACACCCA CTATCCCCTT TGGGGTCCAG
    GAACACCTGC AGCAGCTGGA TGCCCGGATT AGCCTGAGAT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001257732.1
    CDS104..3325
    Translation

    Target ORF information:

    RefSeq Version NM_001270803.1
    Organism Rattus norvegicus(Norway rat)
    Definition Rattus norvegicus class II, major histocompatibility complex, transactivator (Ciita), transcript variant 2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_001270803.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    ATGCGCTGCC AGGTTCCCGG CCCTTCTGGG TCTTACCTGC AAGGCCATAC TCTGTGTGCC 
    ACCATGGAGC TGGGGTCTCC AGAGGGCAGC TACCTGGAGC TCCTTAACAG TGATGCTGAC
    CCCCTACACC TCTACCACCT CTATGACCAG ATGGACCTTG CTGGGGAGGA AGAGATCGAA
    CTCAACTCAG AGACAGACAT GGACACCATC AACTGTGACC AGTTCAGCAA GCTGTTGCAG
    GATATGGAAA TGGATGAAGA GACCCGGGAG GCCTATGCCA ATATCGCGGA ACTGGATCAG
    TACGTGTTCC AGGATACCCA GCTGGAGGGC CTGAGCAAGG ACCTCTTCAT ACAGCACATT
    GGACCAGAGG AAGGCTTTGG TGAGAACGTA GAGGGCCCTG CAGAATCAGG AGAGAAGCCT
    CAGAAGAGAC GCTTCCCAGA AGAGCATGCT ATGGACTCAA AGCACAGGAA ACTAGTGCCT
    CCCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCGCTG GGCATATCCA GATCTTCACC
    ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGTTGGCA CAGGGCTCTC CAGTGTCCTA
    GTCTACCACG GTGAGATGCC CCAGGTCAAC CAATTACTCT CTTCAAGCAG CCCCACTGTC
    CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCGC GCCATCCACA
    GCTGACCTGC CCGGCATGCC TGAACCTGCT CTGACCTCCC GTGTAAATGA GACAGAGGAC
    ACAACACCCC CCTCCCCATG CCAAGAGGAT CCCGAGCCTT CCATCAAGCT TCCAAAATGG
    CCAGAGTCCG TGGAGCGGTT CCAGCACTCC CTACAGGACA AGTACCAAGC ACTGCCCGGG
    AGCCCAAGTG GTCCTCTGGT AGCCATGGAG CTGGTGCGGG CCAGGTTGGA AAGAGGTAGC
    AACAAGAGTC AGGAAAGGGA GCTGGCCACT CCTGACTGGA CAGAGCGCCA GCTAGCCCAT
    GGCGGTCTGG CCGAGGTACT TCGGGTTGTC GGCGACTCCA GGAGATCACG AGAGACACAG
    GTGGTCGCTG TGCTGGGCAA GGCTGGTCAG GGCAAGAGCC ACTGGGCCAG GACAGTGAGC
    CACATTTGGG CACAAGGCCA GTTACCACAA TATGACTTTG TCTTCTACGT CCCCTGTCAA
    TGCTTGGATC GCCCTGGGGA CACCTACCAC CTGCGGGATC TGCTCTGTCC CCCGAACCTG
    CAGCCACTGG CCATGGATGA CGAGGTCATT GATCATATTG TGAGGCAGCC GGACCGTGTT
    CTGCTCATCC TAGATGCTTT TGAGGAGCTA GAGGCCCAAG ACAGCCTCCT GCATGGACCC
    TGTGGACCTC TGTCCCCAGA GCCCTGCTCC CTCCGGGGAC TGCTGGCTGG GCTCTTCCAG
    CGTAAGCTGC TGCGAGGCTG CACCCTGCTC CTCACAGCCC GGCCCCGGGG CCGCCTGGCT
    CAGAGCCTGA GCAAGGCAGA TGCCATCTTC GAGGTGCCCA GCTTCTCTAC GAAACAGGCC
    CAGATCTATA TGAGGCACTA CTTTGAGAAC TCAGGGACAG CAGGGAGTCA CGACAAGGCC
    CTGGGCCTCC TGGAGGGCCA GCCTTTTCTC CTCACCCACA GTCACAGCCC TGTTCTGTGC
    AGTGCCGTGT GTCAGCTCTC CAAGGCCCTG CTGGATCAGG GCGCAGAGGC CCAGCTACCT
    TGCACACTCA CAGGACTCTA TGTTGGCCTG CTAGGCCCTG CAGCTCAGAA CAGTCCTCCT
    GGAGCCTTAG TTGAGTTGGC CAAGCTAGCC TGGGAGCTGG GACGGAGGCA CCAAAGCACC
    TTGCAGGAAA CCCAGTTTCC ATCCGTGGAA GTGAAGACCT GGGCTGTGGC CCAAGGCTTG
    ATGCAGCAGA CCACAGAGGC CCAACTGGCT TTCTCCAGTT TTCTGCTACA GTGCTTCCTG
    GGTGCTGTGT GGCTGGCACA GTGCAATGAG ATGAAAGACA AGGAGCTGCC ACAGTACCTG
    GCCTTGACCC CGAGGAAGAA GCGACCCTAT GACAACTGGC TGGAGGGCGT ACCACGCTTT
    CTGGCTGGCT TAGTTTTCCA GCCTCGAGCC CACTGCCTGG GAGCTCTGGT GGAGCCTGCA
    ATGGCTGCAG TGGCAGATAG GAAACGGAAG GTTCTTACCA GGTACCTGAA GCGCTTGAAG
    CTGGGGACAC TTCGGGCCGG GAGGTTGCTG GAGCTGCTAC ACTGTGCCCA CGAAACACAG
    GAACCTGGTA TTTGGAAGCA TGTTTCACAC CAGCTCCCAG GGCACCTCTC CTTCCTGGGC
    ACACGGCTCA CAGCCCCAGA TGTGTATGTT CTGGGCAGGG CCTTGGAGAC AGCCAGCCAG
    GACTTCTCCT TGGACCTTCG TCAGACTGGC ATCGAGCCCT CCAGACTGGG AGACCTCGTG
    GGACTCAGCT GTGTCACCAG TTTCAGGGCC TCCTTGAGTG ACACAATGGC ATTATGGGAG
    TCCCTACAGC ATCAGGGAGA AACCCAGCTA CTCCAGGCGG CAGAGGAGAA GTTCACCATT
    GAGCCATTTA AGGCCAAATC CCCAAAGGAT GTGGAAGACC TGGACAGCCT TGTGCAGACC
    CAGAGGCTGA GAAACCCCTC AGCGGATGCA GCCAAGGATC TTCCTGCCAT CCGGGACCTT
    AAGAAGCTAG AGTTTGCATT GGGCCCCGTC TTGGGCCCGC AGGCTTTCCC CACACTGGCC
    AAGATCCTTC CAGCATTCTC TTCCCTGCAG CACCTGGACC TGGACTCACT TAGCGAGAAC
    AAGATCGGGG ACAAGGGTGT GTCGAAGCTC TCAGCCACCT TCCCTCAGCT GAAGGCCCTG
    GAGACGCTCA ACCTGTCCCA GAATAGCATC ACCGATGTGG GAGCTTGCAA GCTTGCAGAA
    GCCCTGCCGG CCCTGGCCAA GTCCCTCCTA AGGCTGAGCT TGTACAACAA CTGCATCTGT
    GACGAAGGGG CCAAGAGCCT GGCACGAGTG CTTCCAGACA TGGTGTCCCT CCGGGTGATG
    GATGTCCAGT TCAACAAGTT CACGGCTGTC GGGGCCCAGC AGCTGACCTC CAGCCTTCAG
    AAGTGCCCTC AGGTGGAGAC ACTGGCAATG TGGACACCCA CTATCCCCTT TGGGGTCCAG
    GAACACCTGC AGCAGCTGGA TGCCCGGATT AGCCTGAGAT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ORa09836
    Clone ID Related Accession (Same CDS sequence) XM_008767501.2 , NM_001270804.1
    Accession Version NM_001270804.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3159bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-05-20
    Organism Rattus norvegicus(Norway rat)
    Product MHC class II transactivator isoform 3
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC103514.7. Transcript Variant: This variant (3) has an alternate first exon compared to variant 1. The resulting isoform (3) is shorter at the N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AF251307.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    ATGGAGCTGG GGTCTCCAGA GGGCAGCTAC CTGGAGCTCC TTAACAGTGA TGCTGACCCC 
    CTACACCTCT ACCACCTCTA TGACCAGATG GACCTTGCTG GGGAGGAAGA GATCGAACTC
    AACTCAGAGA CAGACATGGA CACCATCAAC TGTGACCAGT TCAGCAAGCT GTTGCAGGAT
    ATGGAAATGG ATGAAGAGAC CCGGGAGGCC TATGCCAATA TCGCGGAACT GGATCAGTAC
    GTGTTCCAGG ATACCCAGCT GGAGGGCCTG AGCAAGGACC TCTTCATACA GCACATTGGA
    CCAGAGGAAG GCTTTGGTGA GAACGTAGAG GGCCCTGCAG AATCAGGAGA GAAGCCTCAG
    AAGAGACGCT TCCCAGAAGA GCATGCTATG GACTCAAAGC ACAGGAAACT AGTGCCTCCC
    TCTAGGACCT CACTGAACTA TTTGGATCTC CCCGCTGGGC ATATCCAGAT CTTCACCACT
    CTGCCCCAGG GACTCTGGCA AATCTCAGGG GTTGGCACAG GGCTCTCCAG TGTCCTAGTC
    TACCACGGTG AGATGCCCCA GGTCAACCAA TTACTCTCTT CAAGCAGCCC CACTGTCCCC
    AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCGCGCC ATCCACAGCT
    GACCTGCCCG GCATGCCTGA ACCTGCTCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA
    ACACCCCCCT CCCCATGCCA AGAGGATCCC GAGCCTTCCA TCAAGCTTCC AAAATGGCCA
    GAGTCCGTGG AGCGGTTCCA GCACTCCCTA CAGGACAAGT ACCAAGCACT GCCCGGGAGC
    CCAAGTGGTC CTCTGGTAGC CATGGAGCTG GTGCGGGCCA GGTTGGAAAG AGGTAGCAAC
    AAGAGTCAGG AAAGGGAGCT GGCCACTCCT GACTGGACAG AGCGCCAGCT AGCCCATGGC
    GGTCTGGCCG AGGTACTTCG GGTTGTCGGC GACTCCAGGA GATCACGAGA GACACAGGTG
    GTCGCTGTGC TGGGCAAGGC TGGTCAGGGC AAGAGCCACT GGGCCAGGAC AGTGAGCCAC
    ATTTGGGCAC AAGGCCAGTT ACCACAATAT GACTTTGTCT TCTACGTCCC CTGTCAATGC
    TTGGATCGCC CTGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAACCTGCAG
    CCACTGGCCA TGGATGACGA GGTCATTGAT CATATTGTGA GGCAGCCGGA CCGTGTTCTG
    CTCATCCTAG ATGCTTTTGA GGAGCTAGAG GCCCAAGACA GCCTCCTGCA TGGACCCTGT
    GGACCTCTGT CCCCAGAGCC CTGCTCCCTC CGGGGACTGC TGGCTGGGCT CTTCCAGCGT
    AAGCTGCTGC GAGGCTGCAC CCTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG
    AGCCTGAGCA AGGCAGATGC CATCTTCGAG GTGCCCAGCT TCTCTACGAA ACAGGCCCAG
    ATCTATATGA GGCACTACTT TGAGAACTCA GGGACAGCAG GGAGTCACGA CAAGGCCCTG
    GGCCTCCTGG AGGGCCAGCC TTTTCTCCTC ACCCACAGTC ACAGCCCTGT TCTGTGCAGT
    GCCGTGTGTC AGCTCTCCAA GGCCCTGCTG GATCAGGGCG CAGAGGCCCA GCTACCTTGC
    ACACTCACAG GACTCTATGT TGGCCTGCTA GGCCCTGCAG CTCAGAACAG TCCTCCTGGA
    GCCTTAGTTG AGTTGGCCAA GCTAGCCTGG GAGCTGGGAC GGAGGCACCA AAGCACCTTG
    CAGGAAACCC AGTTTCCATC CGTGGAAGTG AAGACCTGGG CTGTGGCCCA AGGCTTGATG
    CAGCAGACCA CAGAGGCCCA ACTGGCTTTC TCCAGTTTTC TGCTACAGTG CTTCCTGGGT
    GCTGTGTGGC TGGCACAGTG CAATGAGATG AAAGACAAGG AGCTGCCACA GTACCTGGCC
    TTGACCCCGA GGAAGAAGCG ACCCTATGAC AACTGGCTGG AGGGCGTACC ACGCTTTCTG
    GCTGGCTTAG TTTTCCAGCC TCGAGCCCAC TGCCTGGGAG CTCTGGTGGA GCCTGCAATG
    GCTGCAGTGG CAGATAGGAA ACGGAAGGTT CTTACCAGGT ACCTGAAGCG CTTGAAGCTG
    GGGACACTTC GGGCCGGGAG GTTGCTGGAG CTGCTACACT GTGCCCACGA AACACAGGAA
    CCTGGTATTT GGAAGCATGT TTCACACCAG CTCCCAGGGC ACCTCTCCTT CCTGGGCACA
    CGGCTCACAG CCCCAGATGT GTATGTTCTG GGCAGGGCCT TGGAGACAGC CAGCCAGGAC
    TTCTCCTTGG ACCTTCGTCA GACTGGCATC GAGCCCTCCA GACTGGGAGA CCTCGTGGGA
    CTCAGCTGTG TCACCAGTTT CAGGGCCTCC TTGAGTGACA CAATGGCATT ATGGGAGTCC
    CTACAGCATC AGGGAGAAAC CCAGCTACTC CAGGCGGCAG AGGAGAAGTT CACCATTGAG
    CCATTTAAGG CCAAATCCCC AAAGGATGTG GAAGACCTGG ACAGCCTTGT GCAGACCCAG
    AGGCTGAGAA ACCCCTCAGC GGATGCAGCC AAGGATCTTC CTGCCATCCG GGACCTTAAG
    AAGCTAGAGT TTGCATTGGG CCCCGTCTTG GGCCCGCAGG CTTTCCCCAC ACTGGCCAAG
    ATCCTTCCAG CATTCTCTTC CCTGCAGCAC CTGGACCTGG ACTCACTTAG CGAGAACAAG
    ATCGGGGACA AGGGTGTGTC GAAGCTCTCA GCCACCTTCC CTCAGCTGAA GGCCCTGGAG
    ACGCTCAACC TGTCCCAGAA TAGCATCACC GATGTGGGAG CTTGCAAGCT TGCAGAAGCC
    CTGCCGGCCC TGGCCAAGTC CCTCCTAAGG CTGAGCTTGT ACAACAACTG CATCTGTGAC
    GAAGGGGCCA AGAGCCTGGC ACGAGTGCTT CCAGACATGG TGTCCCTCCG GGTGATGGAT
    GTCCAGTTCA ACAAGTTCAC GGCTGTCGGG GCCCAGCAGC TGACCTCCAG CCTTCAGAAG
    TGCCCTCAGG TGGAGACACT GGCAATGTGG ACACCCACTA TCCCCTTTGG GGTCCAGGAA
    CACCTGCAGC AGCTGGATGC CCGGATTAGC CTGAGATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001257733.1
    CDS95..3253
    Translation

    Target ORF information:

    RefSeq Version NM_001270804.1
    Organism Rattus norvegicus(Norway rat)
    Definition Rattus norvegicus class II, major histocompatibility complex, transactivator (Ciita), transcript variant 3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    NM_001270804.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    ATGGAGCTGG GGTCTCCAGA GGGCAGCTAC CTGGAGCTCC TTAACAGTGA TGCTGACCCC 
    CTACACCTCT ACCACCTCTA TGACCAGATG GACCTTGCTG GGGAGGAAGA GATCGAACTC
    AACTCAGAGA CAGACATGGA CACCATCAAC TGTGACCAGT TCAGCAAGCT GTTGCAGGAT
    ATGGAAATGG ATGAAGAGAC CCGGGAGGCC TATGCCAATA TCGCGGAACT GGATCAGTAC
    GTGTTCCAGG ATACCCAGCT GGAGGGCCTG AGCAAGGACC TCTTCATACA GCACATTGGA
    CCAGAGGAAG GCTTTGGTGA GAACGTAGAG GGCCCTGCAG AATCAGGAGA GAAGCCTCAG
    AAGAGACGCT TCCCAGAAGA GCATGCTATG GACTCAAAGC ACAGGAAACT AGTGCCTCCC
    TCTAGGACCT CACTGAACTA TTTGGATCTC CCCGCTGGGC ATATCCAGAT CTTCACCACT
    CTGCCCCAGG GACTCTGGCA AATCTCAGGG GTTGGCACAG GGCTCTCCAG TGTCCTAGTC
    TACCACGGTG AGATGCCCCA GGTCAACCAA TTACTCTCTT CAAGCAGCCC CACTGTCCCC
    AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCGCGCC ATCCACAGCT
    GACCTGCCCG GCATGCCTGA ACCTGCTCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA
    ACACCCCCCT CCCCATGCCA AGAGGATCCC GAGCCTTCCA TCAAGCTTCC AAAATGGCCA
    GAGTCCGTGG AGCGGTTCCA GCACTCCCTA CAGGACAAGT ACCAAGCACT GCCCGGGAGC
    CCAAGTGGTC CTCTGGTAGC CATGGAGCTG GTGCGGGCCA GGTTGGAAAG AGGTAGCAAC
    AAGAGTCAGG AAAGGGAGCT GGCCACTCCT GACTGGACAG AGCGCCAGCT AGCCCATGGC
    GGTCTGGCCG AGGTACTTCG GGTTGTCGGC GACTCCAGGA GATCACGAGA GACACAGGTG
    GTCGCTGTGC TGGGCAAGGC TGGTCAGGGC AAGAGCCACT GGGCCAGGAC AGTGAGCCAC
    ATTTGGGCAC AAGGCCAGTT ACCACAATAT GACTTTGTCT TCTACGTCCC CTGTCAATGC
    TTGGATCGCC CTGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAACCTGCAG
    CCACTGGCCA TGGATGACGA GGTCATTGAT CATATTGTGA GGCAGCCGGA CCGTGTTCTG
    CTCATCCTAG ATGCTTTTGA GGAGCTAGAG GCCCAAGACA GCCTCCTGCA TGGACCCTGT
    GGACCTCTGT CCCCAGAGCC CTGCTCCCTC CGGGGACTGC TGGCTGGGCT CTTCCAGCGT
    AAGCTGCTGC GAGGCTGCAC CCTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG
    AGCCTGAGCA AGGCAGATGC CATCTTCGAG GTGCCCAGCT TCTCTACGAA ACAGGCCCAG
    ATCTATATGA GGCACTACTT TGAGAACTCA GGGACAGCAG GGAGTCACGA CAAGGCCCTG
    GGCCTCCTGG AGGGCCAGCC TTTTCTCCTC ACCCACAGTC ACAGCCCTGT TCTGTGCAGT
    GCCGTGTGTC AGCTCTCCAA GGCCCTGCTG GATCAGGGCG CAGAGGCCCA GCTACCTTGC
    ACACTCACAG GACTCTATGT TGGCCTGCTA GGCCCTGCAG CTCAGAACAG TCCTCCTGGA
    GCCTTAGTTG AGTTGGCCAA GCTAGCCTGG GAGCTGGGAC GGAGGCACCA AAGCACCTTG
    CAGGAAACCC AGTTTCCATC CGTGGAAGTG AAGACCTGGG CTGTGGCCCA AGGCTTGATG
    CAGCAGACCA CAGAGGCCCA ACTGGCTTTC TCCAGTTTTC TGCTACAGTG CTTCCTGGGT
    GCTGTGTGGC TGGCACAGTG CAATGAGATG AAAGACAAGG AGCTGCCACA GTACCTGGCC
    TTGACCCCGA GGAAGAAGCG ACCCTATGAC AACTGGCTGG AGGGCGTACC ACGCTTTCTG
    GCTGGCTTAG TTTTCCAGCC TCGAGCCCAC TGCCTGGGAG CTCTGGTGGA GCCTGCAATG
    GCTGCAGTGG CAGATAGGAA ACGGAAGGTT CTTACCAGGT ACCTGAAGCG CTTGAAGCTG
    GGGACACTTC GGGCCGGGAG GTTGCTGGAG CTGCTACACT GTGCCCACGA AACACAGGAA
    CCTGGTATTT GGAAGCATGT TTCACACCAG CTCCCAGGGC ACCTCTCCTT CCTGGGCACA
    CGGCTCACAG CCCCAGATGT GTATGTTCTG GGCAGGGCCT TGGAGACAGC CAGCCAGGAC
    TTCTCCTTGG ACCTTCGTCA GACTGGCATC GAGCCCTCCA GACTGGGAGA CCTCGTGGGA
    CTCAGCTGTG TCACCAGTTT CAGGGCCTCC TTGAGTGACA CAATGGCATT ATGGGAGTCC
    CTACAGCATC AGGGAGAAAC CCAGCTACTC CAGGCGGCAG AGGAGAAGTT CACCATTGAG
    CCATTTAAGG CCAAATCCCC AAAGGATGTG GAAGACCTGG ACAGCCTTGT GCAGACCCAG
    AGGCTGAGAA ACCCCTCAGC GGATGCAGCC AAGGATCTTC CTGCCATCCG GGACCTTAAG
    AAGCTAGAGT TTGCATTGGG CCCCGTCTTG GGCCCGCAGG CTTTCCCCAC ACTGGCCAAG
    ATCCTTCCAG CATTCTCTTC CCTGCAGCAC CTGGACCTGG ACTCACTTAG CGAGAACAAG
    ATCGGGGACA AGGGTGTGTC GAAGCTCTCA GCCACCTTCC CTCAGCTGAA GGCCCTGGAG
    ACGCTCAACC TGTCCCAGAA TAGCATCACC GATGTGGGAG CTTGCAAGCT TGCAGAAGCC
    CTGCCGGCCC TGGCCAAGTC CCTCCTAAGG CTGAGCTTGT ACAACAACTG CATCTGTGAC
    GAAGGGGCCA AGAGCCTGGC ACGAGTGCTT CCAGACATGG TGTCCCTCCG GGTGATGGAT
    GTCCAGTTCA ACAAGTTCAC GGCTGTCGGG GCCCAGCAGC TGACCTCCAG CCTTCAGAAG
    TGCCCTCAGG TGGAGACACT GGCAATGTGG ACACCCACTA TCCCCTTTGG GGTCCAGGAA
    CACCTGCAGC AGCTGGATGC CCGGATTAGC CTGAGATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ORa09812
    Clone ID Related Accession (Same CDS sequence) NM_053529.2 , XM_006245738.3
    Accession Version XM_006245738.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3462bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-07-25
    Organism Rattus norvegicus(Norway rat)
    Product MHC class II transactivator isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006245738.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    ATGAACCACT TCCAGGCCAT CCTGGCCCAG GTGCAGACAC TGCTGTCCAG TCAGCAGCCC 
    AGGCAGGTGC GGGCCCTCCT GGATGGCTTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC
    CATTGTGCCC TGCTTCATGA GCCTGATGGT GAGGCTCTGG CCCGGAAGAT TTCCCTCACC
    TTGCTGGAGA AAGGGGACCT GGACTTGGCG TTTGTGAGCT GGGTTTGCAA CAGGCTGCAG
    GTCCCTGAGG TAGAGAGGGG CCCCAACTGC AGGGACCATG GAGGCCATAC TCTGTGTGCC
    ACCATGGAGC TGGGGTCTCC AGAGGGCAGC TACCTGGAGC TCCTTAACAG TGATGCTGAC
    CCCCTACACC TCTACCACCT CTATGACCAG ATGGACCTTG CTGGGGAGGA AGAGATCGAA
    CTCAACTCAG AGACAGACAT GGACACCATC AACTGTGACC AGTTCAGCAA GCTGTTGCAG
    GATATGGAAA TGGATGAAGA GACCCGGGAG GCCTATGCCA ATATCGCGGA ACTGGATCAG
    TACGTGTTCC AGGATACCCA GCTGGAGGGC CTGAGCAAGG ACCTCTTCAT ACAGCACATT
    GGACCAGAGG AAGGCTTTGG TGAGAACGTA GAGGGCCCTG CAGAATCAGG AGAGAAGCCT
    CAGAAGAGAC GCTTCCCAGA AGAGCATGCT ATGGACTCAA AGCACAGGAA ACTAGTGCCT
    CCCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCGCTG GGCATATCCA GATCTTCACC
    ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGTTGGCA CAGGGCTCTC CAGTGTCCTA
    GTCTACCACG GTGAGATGCC CCAGGTCAAC CAATTACTCT CTTCAAGCAG CCCCACTGTC
    CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCGC GCCATCCACA
    GCTGACCTGC CCGGCATGCC TGAACCTGCT CTGACCTCCC GTGTAAATGA GACAGAGGAC
    ACAACACCCC CCTCCCCATG CCAAGAGGAT CCCGAGCCTT CCATCAAGCT TCCAAAATGG
    CCAGAGTCCG TGGAGCGGTT CCAGCACTCC CTACAGGACA AGTACCAAGC ACTGCCCGGG
    AGCCCAAGTG GTCCTCTGGT AGCCATGGAG CTGGTGCGGG CCAGGTTGGA AAGAGGTAGC
    AACAAGAGTC AGGAAAGGGA GCTGGCCACT CCTGACTGGA CAGAGCGCCA GCTAGCCCAT
    GGCGGTCTGG CCGAGGTACT TCGGGTTGTC GGCGACTCCA GGAGATCACG AGAGACACAG
    GTGGTCGCTG TGCTGGGCAA GGCTGGTCAG GGCAAGAGCC ACTGGGCCAG GACAGTGAGC
    CACATTTGGG CACAAGGCCA GTTACCACAA TATGACTTTG TCTTCTACGT CCCCTGTCAA
    TGCTTGGATC GCCCTGGGGA CACCTACCAC CTGCGGGATC TGCTCTGTCC CCCGAACCTG
    CAGCCACTGG CCATGGATGA CGAGGTCATT GATCATATTG TGAGGCAGCC GGACCGTGTT
    CTGCTCATCC TAGATGCTTT TGAGGAGCTA GAGGCCCAAG ACAGCCTCCT GCATGGACCC
    TGTGGACCTC TGTCCCCAGA GCCCTGCTCC CTCCGGGGAC TGCTGGCTGG GCTCTTCCAG
    CGTAAGCTGC TGCGAGGCTG CACCCTGCTC CTCACAGCCC GGCCCCGGGG CCGCCTGGCT
    CAGAGCCTGA GCAAGGCAGA TGCCATCTTC GAGGTGCCCA GCTTCTCTAC GAAACAGGCC
    CAGATCTATA TGAGGCACTA CTTTGAGAAC TCAGGGACAG CAGGGAGTCA CGACAAGGCC
    CTGGGCCTCC TGGAGGGCCA GCCTTTTCTC CTCACCCACA GTCACAGCCC TGTTCTGTGC
    AGTGCCGTGT GTCAGCTCTC CAAGGCCCTG CTGGATCAGG GCGCAGAGGC CCAGCTACCT
    TGCACACTCA CAGGACTCTA TGTTGGCCTG CTAGGCCCTG CAGCTCAGAA CAGTCCTCCT
    GGAGCCTTAG TTGAGTTGGC CAAGCTAGCC TGGGAGCTGG GACGGAGGCA CCAAAGCACC
    TTGCAGGAAA CCCAGTTTCC ATCCGTGGAA GTGAAGACCT GGGCTGTGGC CCAAGGCTTG
    ATGCAGCAGA CCACAGAGGC CCAACTGGCT TTCTCCAGTT TTCTGCTACA GTGCTTCCTG
    GGTGCTGTGT GGCTGGCACA GTGCAATGAG ATGAAAGACA AGGAGCTGCC ACAGTACCTG
    GCCTTGACCC CGAGGAAGAA GCGACCCTAT GACAACTGGC TGGAGGGCGT ACCACGCTTT
    CTGGCTGGCT TAGTTTTCCA GCCTCGAGCC CACTGCCTGG GAGCTCTGGT GGAGCCTGCA
    ATGGCTGCAG TGGCAGATAG GAAACGGAAG GTTCTTACCA GGTACCTGAA GCGCTTGAAG
    CTGGGGACAC TTCGGGCCGG GAGGTTGCTG GAGCTGCTAC ACTGTGCCCA CGAAACACAG
    GAACCTGGTA TTTGGAAGCA TGTTTCACAC CAGCTCCCAG GGCACCTCTC CTTCCTGGGC
    ACACGGCTCA CAGCCCCAGA TGTGTATGTT CTGGGCAGGG CCTTGGAGAC AGCCAGCCAG
    GACTTCTCCT TGGACCTTCG TCAGACTGGC ATCGAGCCCT CCAGACTGGG AGACCTCGTG
    GGACTCAGCT GTGTCACCAG TTTCAGGGCC TCCTTGAGTG ACACAATGGC ATTATGGGAG
    TCCCTACAGC ATCAGGGAGA AACCCAGCTA CTCCAGGCGG CAGAGGAGAA GTTCACCATT
    GAGCCATTTA AGGCCAAATC CCCAAAGGAT GTGGAAGACC TGGACAGCCT TGTGCAGACC
    CAGAGGCTGA GAAACCCCTC AGCGGATGCA GCCAAGGATC TTCCTGCCAT CCGGGACCTT
    AAGAAGCTAG AGTTTGCATT GGGCCCCGTC TTGGGCCCGC AGGCTTTCCC CACACTGGCC
    AAGATCCTTC CAGCATTCTC TTCCCTGCAG CACCTGGACC TGGACTCACT TAGCGAGAAC
    AAGATCGGGG ACAAGGGTGT GTCGAAGCTC TCAGCCACCT TCCCTCAGCT GAAGGCCCTG
    GAGACGCTCA ACCTGTCCCA GAATAGCATC ACCGATGTGG GAGCTTGCAA GCTTGCAGAA
    GCCCTGCCGG CCCTGGCCAA GTCCCTCCTA AGGCTGAGCT TGTACAACAA CTGCATCTGT
    GACGAAGGGG CCAAGAGCCT GGCACGAGTG CTTCCAGACA TGGTGTCCCT CCGGGTGATG
    GATGTCCAGT TCAACAAGTT CACGGCTGTC GGGGCCCAGC AGCTGACCTC CAGCCTTCAG
    AAGTGCCCTC AGGTGGAGAC ACTGGCAATG TGGACACCCA CTATCCCCTT TGGGGTCCAG
    GAACACCTGC AGCAGCTGGA TGCCCGGATT AGCCTGAGAT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006245800.1
    CDS116..3577
    Translation

    Target ORF information:

    RefSeq Version XM_006245738.3
    Organism Rattus norvegicus(Norway rat)
    Definition Rattus norvegicus class II, major histocompatibility complex, transactivator (Ciita), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006245738.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    ATGAACCACT TCCAGGCCAT CCTGGCCCAG GTGCAGACAC TGCTGTCCAG TCAGCAGCCC 
    AGGCAGGTGC GGGCCCTCCT GGATGGCTTG CTGGAAGAAG AGCTGCTCTC ACGGGAATAC
    CATTGTGCCC TGCTTCATGA GCCTGATGGT GAGGCTCTGG CCCGGAAGAT TTCCCTCACC
    TTGCTGGAGA AAGGGGACCT GGACTTGGCG TTTGTGAGCT GGGTTTGCAA CAGGCTGCAG
    GTCCCTGAGG TAGAGAGGGG CCCCAACTGC AGGGACCATG GAGGCCATAC TCTGTGTGCC
    ACCATGGAGC TGGGGTCTCC AGAGGGCAGC TACCTGGAGC TCCTTAACAG TGATGCTGAC
    CCCCTACACC TCTACCACCT CTATGACCAG ATGGACCTTG CTGGGGAGGA AGAGATCGAA
    CTCAACTCAG AGACAGACAT GGACACCATC AACTGTGACC AGTTCAGCAA GCTGTTGCAG
    GATATGGAAA TGGATGAAGA GACCCGGGAG GCCTATGCCA ATATCGCGGA ACTGGATCAG
    TACGTGTTCC AGGATACCCA GCTGGAGGGC CTGAGCAAGG ACCTCTTCAT ACAGCACATT
    GGACCAGAGG AAGGCTTTGG TGAGAACGTA GAGGGCCCTG CAGAATCAGG AGAGAAGCCT
    CAGAAGAGAC GCTTCCCAGA AGAGCATGCT ATGGACTCAA AGCACAGGAA ACTAGTGCCT
    CCCTCTAGGA CCTCACTGAA CTATTTGGAT CTCCCCGCTG GGCATATCCA GATCTTCACC
    ACTCTGCCCC AGGGACTCTG GCAAATCTCA GGGGTTGGCA CAGGGCTCTC CAGTGTCCTA
    GTCTACCACG GTGAGATGCC CCAGGTCAAC CAATTACTCT CTTCAAGCAG CCCCACTGTC
    CCCAGTCTCC CCGAGTCCCC AGACCGGCCT GGCTCCACCA GCCCCTTCGC GCCATCCACA
    GCTGACCTGC CCGGCATGCC TGAACCTGCT CTGACCTCCC GTGTAAATGA GACAGAGGAC
    ACAACACCCC CCTCCCCATG CCAAGAGGAT CCCGAGCCTT CCATCAAGCT TCCAAAATGG
    CCAGAGTCCG TGGAGCGGTT CCAGCACTCC CTACAGGACA AGTACCAAGC ACTGCCCGGG
    AGCCCAAGTG GTCCTCTGGT AGCCATGGAG CTGGTGCGGG CCAGGTTGGA AAGAGGTAGC
    AACAAGAGTC AGGAAAGGGA GCTGGCCACT CCTGACTGGA CAGAGCGCCA GCTAGCCCAT
    GGCGGTCTGG CCGAGGTACT TCGGGTTGTC GGCGACTCCA GGAGATCACG AGAGACACAG
    GTGGTCGCTG TGCTGGGCAA GGCTGGTCAG GGCAAGAGCC ACTGGGCCAG GACAGTGAGC
    CACATTTGGG CACAAGGCCA GTTACCACAA TATGACTTTG TCTTCTACGT CCCCTGTCAA
    TGCTTGGATC GCCCTGGGGA CACCTACCAC CTGCGGGATC TGCTCTGTCC CCCGAACCTG
    CAGCCACTGG CCATGGATGA CGAGGTCATT GATCATATTG TGAGGCAGCC GGACCGTGTT
    CTGCTCATCC TAGATGCTTT TGAGGAGCTA GAGGCCCAAG ACAGCCTCCT GCATGGACCC
    TGTGGACCTC TGTCCCCAGA GCCCTGCTCC CTCCGGGGAC TGCTGGCTGG GCTCTTCCAG
    CGTAAGCTGC TGCGAGGCTG CACCCTGCTC CTCACAGCCC GGCCCCGGGG CCGCCTGGCT
    CAGAGCCTGA GCAAGGCAGA TGCCATCTTC GAGGTGCCCA GCTTCTCTAC GAAACAGGCC
    CAGATCTATA TGAGGCACTA CTTTGAGAAC TCAGGGACAG CAGGGAGTCA CGACAAGGCC
    CTGGGCCTCC TGGAGGGCCA GCCTTTTCTC CTCACCCACA GTCACAGCCC TGTTCTGTGC
    AGTGCCGTGT GTCAGCTCTC CAAGGCCCTG CTGGATCAGG GCGCAGAGGC CCAGCTACCT
    TGCACACTCA CAGGACTCTA TGTTGGCCTG CTAGGCCCTG CAGCTCAGAA CAGTCCTCCT
    GGAGCCTTAG TTGAGTTGGC CAAGCTAGCC TGGGAGCTGG GACGGAGGCA CCAAAGCACC
    TTGCAGGAAA CCCAGTTTCC ATCCGTGGAA GTGAAGACCT GGGCTGTGGC CCAAGGCTTG
    ATGCAGCAGA CCACAGAGGC CCAACTGGCT TTCTCCAGTT TTCTGCTACA GTGCTTCCTG
    GGTGCTGTGT GGCTGGCACA GTGCAATGAG ATGAAAGACA AGGAGCTGCC ACAGTACCTG
    GCCTTGACCC CGAGGAAGAA GCGACCCTAT GACAACTGGC TGGAGGGCGT ACCACGCTTT
    CTGGCTGGCT TAGTTTTCCA GCCTCGAGCC CACTGCCTGG GAGCTCTGGT GGAGCCTGCA
    ATGGCTGCAG TGGCAGATAG GAAACGGAAG GTTCTTACCA GGTACCTGAA GCGCTTGAAG
    CTGGGGACAC TTCGGGCCGG GAGGTTGCTG GAGCTGCTAC ACTGTGCCCA CGAAACACAG
    GAACCTGGTA TTTGGAAGCA TGTTTCACAC CAGCTCCCAG GGCACCTCTC CTTCCTGGGC
    ACACGGCTCA CAGCCCCAGA TGTGTATGTT CTGGGCAGGG CCTTGGAGAC AGCCAGCCAG
    GACTTCTCCT TGGACCTTCG TCAGACTGGC ATCGAGCCCT CCAGACTGGG AGACCTCGTG
    GGACTCAGCT GTGTCACCAG TTTCAGGGCC TCCTTGAGTG ACACAATGGC ATTATGGGAG
    TCCCTACAGC ATCAGGGAGA AACCCAGCTA CTCCAGGCGG CAGAGGAGAA GTTCACCATT
    GAGCCATTTA AGGCCAAATC CCCAAAGGAT GTGGAAGACC TGGACAGCCT TGTGCAGACC
    CAGAGGCTGA GAAACCCCTC AGCGGATGCA GCCAAGGATC TTCCTGCCAT CCGGGACCTT
    AAGAAGCTAG AGTTTGCATT GGGCCCCGTC TTGGGCCCGC AGGCTTTCCC CACACTGGCC
    AAGATCCTTC CAGCATTCTC TTCCCTGCAG CACCTGGACC TGGACTCACT TAGCGAGAAC
    AAGATCGGGG ACAAGGGTGT GTCGAAGCTC TCAGCCACCT TCCCTCAGCT GAAGGCCCTG
    GAGACGCTCA ACCTGTCCCA GAATAGCATC ACCGATGTGG GAGCTTGCAA GCTTGCAGAA
    GCCCTGCCGG CCCTGGCCAA GTCCCTCCTA AGGCTGAGCT TGTACAACAA CTGCATCTGT
    GACGAAGGGG CCAAGAGCCT GGCACGAGTG CTTCCAGACA TGGTGTCCCT CCGGGTGATG
    GATGTCCAGT TCAACAAGTT CACGGCTGTC GGGGCCCAGC AGCTGACCTC CAGCCTTCAG
    AAGTGCCCTC AGGTGGAGAC ACTGGCAATG TGGACACCCA CTATCCCCTT TGGGGTCCAG
    GAACACCTGC AGCAGCTGGA TGCCCGGATT AGCCTGAGAT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ORa09836
    Clone ID Related Accession (Same CDS sequence) XM_008767501.2 , NM_001270804.1
    Accession Version XM_008767501.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3159bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-07-25
    Organism Rattus norvegicus(Norway rat)
    Product MHC class II transactivator isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005109.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008767501.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    ATGGAGCTGG GGTCTCCAGA GGGCAGCTAC CTGGAGCTCC TTAACAGTGA TGCTGACCCC 
    CTACACCTCT ACCACCTCTA TGACCAGATG GACCTTGCTG GGGAGGAAGA GATCGAACTC
    AACTCAGAGA CAGACATGGA CACCATCAAC TGTGACCAGT TCAGCAAGCT GTTGCAGGAT
    ATGGAAATGG ATGAAGAGAC CCGGGAGGCC TATGCCAATA TCGCGGAACT GGATCAGTAC
    GTGTTCCAGG ATACCCAGCT GGAGGGCCTG AGCAAGGACC TCTTCATACA GCACATTGGA
    CCAGAGGAAG GCTTTGGTGA GAACGTAGAG GGCCCTGCAG AATCAGGAGA GAAGCCTCAG
    AAGAGACGCT TCCCAGAAGA GCATGCTATG GACTCAAAGC ACAGGAAACT AGTGCCTCCC
    TCTAGGACCT CACTGAACTA TTTGGATCTC CCCGCTGGGC ATATCCAGAT CTTCACCACT
    CTGCCCCAGG GACTCTGGCA AATCTCAGGG GTTGGCACAG GGCTCTCCAG TGTCCTAGTC
    TACCACGGTG AGATGCCCCA GGTCAACCAA TTACTCTCTT CAAGCAGCCC CACTGTCCCC
    AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCGCGCC ATCCACAGCT
    GACCTGCCCG GCATGCCTGA ACCTGCTCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA
    ACACCCCCCT CCCCATGCCA AGAGGATCCC GAGCCTTCCA TCAAGCTTCC AAAATGGCCA
    GAGTCCGTGG AGCGGTTCCA GCACTCCCTA CAGGACAAGT ACCAAGCACT GCCCGGGAGC
    CCAAGTGGTC CTCTGGTAGC CATGGAGCTG GTGCGGGCCA GGTTGGAAAG AGGTAGCAAC
    AAGAGTCAGG AAAGGGAGCT GGCCACTCCT GACTGGACAG AGCGCCAGCT AGCCCATGGC
    GGTCTGGCCG AGGTACTTCG GGTTGTCGGC GACTCCAGGA GATCACGAGA GACACAGGTG
    GTCGCTGTGC TGGGCAAGGC TGGTCAGGGC AAGAGCCACT GGGCCAGGAC AGTGAGCCAC
    ATTTGGGCAC AAGGCCAGTT ACCACAATAT GACTTTGTCT TCTACGTCCC CTGTCAATGC
    TTGGATCGCC CTGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAACCTGCAG
    CCACTGGCCA TGGATGACGA GGTCATTGAT CATATTGTGA GGCAGCCGGA CCGTGTTCTG
    CTCATCCTAG ATGCTTTTGA GGAGCTAGAG GCCCAAGACA GCCTCCTGCA TGGACCCTGT
    GGACCTCTGT CCCCAGAGCC CTGCTCCCTC CGGGGACTGC TGGCTGGGCT CTTCCAGCGT
    AAGCTGCTGC GAGGCTGCAC CCTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG
    AGCCTGAGCA AGGCAGATGC CATCTTCGAG GTGCCCAGCT TCTCTACGAA ACAGGCCCAG
    ATCTATATGA GGCACTACTT TGAGAACTCA GGGACAGCAG GGAGTCACGA CAAGGCCCTG
    GGCCTCCTGG AGGGCCAGCC TTTTCTCCTC ACCCACAGTC ACAGCCCTGT TCTGTGCAGT
    GCCGTGTGTC AGCTCTCCAA GGCCCTGCTG GATCAGGGCG CAGAGGCCCA GCTACCTTGC
    ACACTCACAG GACTCTATGT TGGCCTGCTA GGCCCTGCAG CTCAGAACAG TCCTCCTGGA
    GCCTTAGTTG AGTTGGCCAA GCTAGCCTGG GAGCTGGGAC GGAGGCACCA AAGCACCTTG
    CAGGAAACCC AGTTTCCATC CGTGGAAGTG AAGACCTGGG CTGTGGCCCA AGGCTTGATG
    CAGCAGACCA CAGAGGCCCA ACTGGCTTTC TCCAGTTTTC TGCTACAGTG CTTCCTGGGT
    GCTGTGTGGC TGGCACAGTG CAATGAGATG AAAGACAAGG AGCTGCCACA GTACCTGGCC
    TTGACCCCGA GGAAGAAGCG ACCCTATGAC AACTGGCTGG AGGGCGTACC ACGCTTTCTG
    GCTGGCTTAG TTTTCCAGCC TCGAGCCCAC TGCCTGGGAG CTCTGGTGGA GCCTGCAATG
    GCTGCAGTGG CAGATAGGAA ACGGAAGGTT CTTACCAGGT ACCTGAAGCG CTTGAAGCTG
    GGGACACTTC GGGCCGGGAG GTTGCTGGAG CTGCTACACT GTGCCCACGA AACACAGGAA
    CCTGGTATTT GGAAGCATGT TTCACACCAG CTCCCAGGGC ACCTCTCCTT CCTGGGCACA
    CGGCTCACAG CCCCAGATGT GTATGTTCTG GGCAGGGCCT TGGAGACAGC CAGCCAGGAC
    TTCTCCTTGG ACCTTCGTCA GACTGGCATC GAGCCCTCCA GACTGGGAGA CCTCGTGGGA
    CTCAGCTGTG TCACCAGTTT CAGGGCCTCC TTGAGTGACA CAATGGCATT ATGGGAGTCC
    CTACAGCATC AGGGAGAAAC CCAGCTACTC CAGGCGGCAG AGGAGAAGTT CACCATTGAG
    CCATTTAAGG CCAAATCCCC AAAGGATGTG GAAGACCTGG ACAGCCTTGT GCAGACCCAG
    AGGCTGAGAA ACCCCTCAGC GGATGCAGCC AAGGATCTTC CTGCCATCCG GGACCTTAAG
    AAGCTAGAGT TTGCATTGGG CCCCGTCTTG GGCCCGCAGG CTTTCCCCAC ACTGGCCAAG
    ATCCTTCCAG CATTCTCTTC CCTGCAGCAC CTGGACCTGG ACTCACTTAG CGAGAACAAG
    ATCGGGGACA AGGGTGTGTC GAAGCTCTCA GCCACCTTCC CTCAGCTGAA GGCCCTGGAG
    ACGCTCAACC TGTCCCAGAA TAGCATCACC GATGTGGGAG CTTGCAAGCT TGCAGAAGCC
    CTGCCGGCCC TGGCCAAGTC CCTCCTAAGG CTGAGCTTGT ACAACAACTG CATCTGTGAC
    GAAGGGGCCA AGAGCCTGGC ACGAGTGCTT CCAGACATGG TGTCCCTCCG GGTGATGGAT
    GTCCAGTTCA ACAAGTTCAC GGCTGTCGGG GCCCAGCAGC TGACCTCCAG CCTTCAGAAG
    TGCCCTCAGG TGGAGACACT GGCAATGTGG ACACCCACTA TCCCCTTTGG GGTCCAGGAA
    CACCTGCAGC AGCTGGATGC CCGGATTAGC CTGAGATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_008765723.1
    CDS1420..4578
    Translation

    Target ORF information:

    RefSeq Version XM_008767501.2
    Organism Rattus norvegicus(Norway rat)
    Definition Rattus norvegicus class II, major histocompatibility complex, transactivator (Ciita), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_008767501.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    ATGGAGCTGG GGTCTCCAGA GGGCAGCTAC CTGGAGCTCC TTAACAGTGA TGCTGACCCC 
    CTACACCTCT ACCACCTCTA TGACCAGATG GACCTTGCTG GGGAGGAAGA GATCGAACTC
    AACTCAGAGA CAGACATGGA CACCATCAAC TGTGACCAGT TCAGCAAGCT GTTGCAGGAT
    ATGGAAATGG ATGAAGAGAC CCGGGAGGCC TATGCCAATA TCGCGGAACT GGATCAGTAC
    GTGTTCCAGG ATACCCAGCT GGAGGGCCTG AGCAAGGACC TCTTCATACA GCACATTGGA
    CCAGAGGAAG GCTTTGGTGA GAACGTAGAG GGCCCTGCAG AATCAGGAGA GAAGCCTCAG
    AAGAGACGCT TCCCAGAAGA GCATGCTATG GACTCAAAGC ACAGGAAACT AGTGCCTCCC
    TCTAGGACCT CACTGAACTA TTTGGATCTC CCCGCTGGGC ATATCCAGAT CTTCACCACT
    CTGCCCCAGG GACTCTGGCA AATCTCAGGG GTTGGCACAG GGCTCTCCAG TGTCCTAGTC
    TACCACGGTG AGATGCCCCA GGTCAACCAA TTACTCTCTT CAAGCAGCCC CACTGTCCCC
    AGTCTCCCCG AGTCCCCAGA CCGGCCTGGC TCCACCAGCC CCTTCGCGCC ATCCACAGCT
    GACCTGCCCG GCATGCCTGA ACCTGCTCTG ACCTCCCGTG TAAATGAGAC AGAGGACACA
    ACACCCCCCT CCCCATGCCA AGAGGATCCC GAGCCTTCCA TCAAGCTTCC AAAATGGCCA
    GAGTCCGTGG AGCGGTTCCA GCACTCCCTA CAGGACAAGT ACCAAGCACT GCCCGGGAGC
    CCAAGTGGTC CTCTGGTAGC CATGGAGCTG GTGCGGGCCA GGTTGGAAAG AGGTAGCAAC
    AAGAGTCAGG AAAGGGAGCT GGCCACTCCT GACTGGACAG AGCGCCAGCT AGCCCATGGC
    GGTCTGGCCG AGGTACTTCG GGTTGTCGGC GACTCCAGGA GATCACGAGA GACACAGGTG
    GTCGCTGTGC TGGGCAAGGC TGGTCAGGGC AAGAGCCACT GGGCCAGGAC AGTGAGCCAC
    ATTTGGGCAC AAGGCCAGTT ACCACAATAT GACTTTGTCT TCTACGTCCC CTGTCAATGC
    TTGGATCGCC CTGGGGACAC CTACCACCTG CGGGATCTGC TCTGTCCCCC GAACCTGCAG
    CCACTGGCCA TGGATGACGA GGTCATTGAT CATATTGTGA GGCAGCCGGA CCGTGTTCTG
    CTCATCCTAG ATGCTTTTGA GGAGCTAGAG GCCCAAGACA GCCTCCTGCA TGGACCCTGT
    GGACCTCTGT CCCCAGAGCC CTGCTCCCTC CGGGGACTGC TGGCTGGGCT CTTCCAGCGT
    AAGCTGCTGC GAGGCTGCAC CCTGCTCCTC ACAGCCCGGC CCCGGGGCCG CCTGGCTCAG
    AGCCTGAGCA AGGCAGATGC CATCTTCGAG GTGCCCAGCT TCTCTACGAA ACAGGCCCAG
    ATCTATATGA GGCACTACTT TGAGAACTCA GGGACAGCAG GGAGTCACGA CAAGGCCCTG
    GGCCTCCTGG AGGGCCAGCC TTTTCTCCTC ACCCACAGTC ACAGCCCTGT TCTGTGCAGT
    GCCGTGTGTC AGCTCTCCAA GGCCCTGCTG GATCAGGGCG CAGAGGCCCA GCTACCTTGC
    ACACTCACAG GACTCTATGT TGGCCTGCTA GGCCCTGCAG CTCAGAACAG TCCTCCTGGA
    GCCTTAGTTG AGTTGGCCAA GCTAGCCTGG GAGCTGGGAC GGAGGCACCA AAGCACCTTG
    CAGGAAACCC AGTTTCCATC CGTGGAAGTG AAGACCTGGG CTGTGGCCCA AGGCTTGATG
    CAGCAGACCA CAGAGGCCCA ACTGGCTTTC TCCAGTTTTC TGCTACAGTG CTTCCTGGGT
    GCTGTGTGGC TGGCACAGTG CAATGAGATG AAAGACAAGG AGCTGCCACA GTACCTGGCC
    TTGACCCCGA GGAAGAAGCG ACCCTATGAC AACTGGCTGG AGGGCGTACC ACGCTTTCTG
    GCTGGCTTAG TTTTCCAGCC TCGAGCCCAC TGCCTGGGAG CTCTGGTGGA GCCTGCAATG
    GCTGCAGTGG CAGATAGGAA ACGGAAGGTT CTTACCAGGT ACCTGAAGCG CTTGAAGCTG
    GGGACACTTC GGGCCGGGAG GTTGCTGGAG CTGCTACACT GTGCCCACGA AACACAGGAA
    CCTGGTATTT GGAAGCATGT TTCACACCAG CTCCCAGGGC ACCTCTCCTT CCTGGGCACA
    CGGCTCACAG CCCCAGATGT GTATGTTCTG GGCAGGGCCT TGGAGACAGC CAGCCAGGAC
    TTCTCCTTGG ACCTTCGTCA GACTGGCATC GAGCCCTCCA GACTGGGAGA CCTCGTGGGA
    CTCAGCTGTG TCACCAGTTT CAGGGCCTCC TTGAGTGACA CAATGGCATT ATGGGAGTCC
    CTACAGCATC AGGGAGAAAC CCAGCTACTC CAGGCGGCAG AGGAGAAGTT CACCATTGAG
    CCATTTAAGG CCAAATCCCC AAAGGATGTG GAAGACCTGG ACAGCCTTGT GCAGACCCAG
    AGGCTGAGAA ACCCCTCAGC GGATGCAGCC AAGGATCTTC CTGCCATCCG GGACCTTAAG
    AAGCTAGAGT TTGCATTGGG CCCCGTCTTG GGCCCGCAGG CTTTCCCCAC ACTGGCCAAG
    ATCCTTCCAG CATTCTCTTC CCTGCAGCAC CTGGACCTGG ACTCACTTAG CGAGAACAAG
    ATCGGGGACA AGGGTGTGTC GAAGCTCTCA GCCACCTTCC CTCAGCTGAA GGCCCTGGAG
    ACGCTCAACC TGTCCCAGAA TAGCATCACC GATGTGGGAG CTTGCAAGCT TGCAGAAGCC
    CTGCCGGCCC TGGCCAAGTC CCTCCTAAGG CTGAGCTTGT ACAACAACTG CATCTGTGAC
    GAAGGGGCCA AGAGCCTGGC ACGAGTGCTT CCAGACATGG TGTCCCTCCG GGTGATGGAT
    GTCCAGTTCA ACAAGTTCAC GGCTGTCGGG GCCCAGCAGC TGACCTCCAG CCTTCAGAAG
    TGCCCTCAGG TGGAGACACT GGCAATGTGG ACACCCACTA TCCCCTTTGG GGTCCAGGAA
    CACCTGCAGC AGCTGGATGC CCGGATTAGC CTGAGATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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