Eremothecium gossypii |
AGOS_AGR303W |
NP_986969.2 |
Pan troglodytes (chimpanzee) |
XRN2 |
XP_514546.2 |
Canis lupus familiaris (dog) |
XRN2 |
XP_534324.2 |
Rattus norvegicus (Norway rat) |
Xrn2 |
NP_001102066.1 |
Drosophila melanogaster (fruit fly) |
Rat1 |
NP_001260166.1 |
Anopheles gambiae (African malaria mosquito) |
AgaP_AGAP004090 |
XP_309641.5 |
Caenorhabditis elegans (roundworm) |
xrn-2 |
NP_496958.2 |
Saccharomyces cerevisiae (baker's yeast) |
RAT1 |
NP_014691.1 |
Xenopus tropicalis (tropical clawed frog) |
xrn2 |
XP_002939479.1 |
Homo sapiens (human) |
XRN2 |
NP_036387.2 |
Bos taurus (cattle) |
XRN2 |
NP_001179401.1 |
Mus musculus (house mouse) |
Xrn2 |
NP_036047.2 |
Schizosaccharomyces pombe (fission yeast) |
dhp1 |
NP_594155.1 |
Neurospora crassa |
NCU01643 |
XP_956265.1 |
|
XRN2 |
XP_001094734.2 |
Gallus gallus (chicken) |
XRN2 |
NP_001026204.1 |
Danio rerio (zebrafish) |
xrn2 |
NP_001001944.2 |
Magnaporthe oryzae (rice blast fungus) |
MGG_11426 |
XP_003717803.1 |
Kluyveromyces lactis |
KLLA0F07469g |
XP_455419.1 |
Arabidopsis thaliana (thale cress) |
XRN3 |
NP_565114.1 |
Oryza sativa (rice) |
Os01g0872700 |
NP_001044947.1 |
Related articles in PubMed
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV.
Dujon B, Albermann K, Aldea M, Alexandraki D, Ansorge W, Arino J, Benes V, Bohn C, Bolotin-Fukuhara M, Bordonn? R, Boyer J, Camasses A, Casamayor A, Casas C, Ch?ret G, Cziepluch C, Daignan-Fornier B, Dang DV, de Haan M, Delius H, Durand P, Fairhead C, Feldmann H, Gaillon L, Kleine K
Nature387(6632 Suppl)98-102(1997 May)
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following RAT1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RAT1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID |
OSi03359 |
Clone ID Related Accession (Same CDS sequence) |
NM_001183467.1
|
Accession Version |
NM_001183467.1 Latest version! |
Documents for ORF clone product in default vector |
Sequence Information |
ORF Nucleotide Sequence (Length: 3021bp)
Protein sequence
SNP |
Vector |
pcDNA3.1+/C-(K)DYK or customized vector |
User Manual |
Clone information |
Clone Map |
MSDS |
Tag on pcDNA3.1+/C-(K)DYK |
C terminal DYKDDDDK tags |
ORF Insert Method |
CloneEZ™ Seamless cloning technology |
Insert Structure |
linear |
Update Date |
2019-10-31 |
Organism |
Saccharomyces cerevisiae S288C |
Product |
ssRNA exonuclease RAT1 |
Comment |
Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001147).
##Genome-Annotation-Data-START##
Annotation Provider :: SGD
Annotation Status :: Full Annotation
Annotation Version :: R64-2-1
URL :: http://www.yeastgenome.org/
##Genome-Annotation-Data-END##
COMPLETENESS: incomplete on both ends.
|
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001
| ATGGGTGTTC CGTCATTTTT CAGATGGCTA TCTCGAAAAT ATCCAAAGAT CATATCCCCA GTATTGGAAG AGCAACCTCA GATAGTCGAC GGTGTCATAT TGCCGTTGGA TTATTCCGCC TCAAATCCAA ACGGTGAGTT AGACAACTTG TATTTGGATA TGAATGGTAT TGTTCATCCA TGTTCGCACC CAGAAAACAA ACCGCCTCCA GAGACTGAAG ATGAAATGCT TTTGGCAGTT TTTGAATATA CCAATCGTGT GTTAAATATG GCTAGACCAC GCAAGGTACT TGTTATGGCT GTTGATGGTG TTGCTCCTCG TGCCAAAATG AACCAGCAGA GAGCGCGTAG ATTTAGGAGT GCTAGGGATG CTCAGATTGA AAACGAAGCC AGGGAAGAAA TTATGAGACA GCGAGAAGAA GTTGGTGAGA TAATCGATGA TGCCGTCAGG AACAAGAAAA CTTGGGATTC AAATGCGATC ACTCCAGGCA CCCCATTTAT GGATAAGCTT GCCGCGGCCC TCCGTTATTG GACAGCATTT AAACTGGCCA CTGACCCTGG TTGGAAAAAC CTGCAGGTGA TTATCAGTGA CGCCACCGTC CCAGGTGAAG GTGAGCACAA AATAATGAAT TTCATTAGGT CTCAAAGAGC TGATCCTGAA TATAATCCCA ACACAACGCA CTGTATATAC GGTTTGGATG CTGATTTAAT TTTTTTGGGC CTTGCCACTC ATGAACCACA TTTTAAAATT CTAAGAGAAG ATGTTTTTGC TCAAGACAAT CGGAAAAGAA ATAACTTAAA AGATACTATA AATATGACTG AAGAAGAAAA ACAATTTCTC CAAAAACAAA ATTCCGAACA ACCTTTCTTG TGGCTGCACA TAAATGTTTT GAGGGAATAC TTGTCCGCTG AGTTATGGGT TCCGGGTCTT CCATTTACAT TTGATTTAGA AAGGGCTATC GACGATTGGG TTTTCATGTG CTTTTTCTGT GGTAATGACT TTTTACCACA TTTACCATGC TTAGATGTCA GAGAAAATAG TATTGATATT CTCTTGGATA TTTGGAAGGT AGTACTACCG AAATTGAAAA CGTACATGAC CTGCGACGGT GTCTTGAACC TCCCTTCTGT TGAAACGCTA TTGCAACACC TTGGCTCCCG TGAGGGGGAT ATCTTCAAAA CTAGACATAT TCAAGAAGCC AGAAAGAAAG AAGCTTTTGA AAGAAGGAAA GCGCAGAAAA ATATGTCAAA AGGTCAAGAC AGGCATCCTA CAGTAGCTAC GGAGCAACTG CAAATGTATG ACACACAAGG AAATTTAGCA AAAGGTTCAT GGAACTTGAC CACCAGTGAT ATGGTAAGGT TGAAAAAGGA ACTGATGCTT GCGAACGAGG GGAACGAAGA AGCAATCGCC AAAGTTAAGC AACAGAGTGA TAAGAACAAT GAACTGATGA AAGATATCAG CAAGGAAGAA ATTGATGATG CTGTTAGTAA GGCTAACAAA ACTAATTTTA ACCTTGCAGA AGTTATGAAA CAGAAAATAA TAAATAAGAA ACACCGTCTT GAAAAGGATA ATGAAGAGGA AGAAATTGCT AAGGATAGCA AAAAAGTTAA GACAGAGAAA GCGGAATCAG AGTGCGATCT CGATGCAGAG ATCAAAGATG AGATTGTGGC TGACGTAAAC GACAGGGAAA ACTCTGAAAC TACAGAAGTA TCAAGAGATT CACCAGTCCA CAGCACAGTG AATGTCAGCG AAGGTCCCAA AAATGGGGTC TTTGATACAG ATGAATTTGT CAAACTATTC GAACCTGGTT ACCACGAAAG ATATTACACA GCTAAATTTC ACGTTACTCC TCAAGATATT GAACAGTTAA GAAAAGATAT GGTAAAATGC TATATCGAAG GGGTCGCCTG GGTACTAATG TATTACTATC AAGGTTGTGC CTCTTGGAAT TGGTTCTATC CGTACCATTA TGCTCCTCTG GCAACAGATT TCCATGGGTT TTCTCACTTG GAGATAAAGT TCGAAGAAGG TACTCCATTT TTACCTTACG AACAATTGAT GAGTGTTTTA CCAGCTGCAT CTGGCCATGC TTTGCCAAAA ATTTTCCGGT CTTTGATGTC TGAACCTGAC TCTGAAATCA TTGATTTTTA TCCTGAAGAA TTTCCCATAG ATATGAATGG TAAGAAGATG TCCTGGCAAG GCATAGCGTT GCTACCATTC ATCGATCAGG ATAGACTGTT AACAGCTGTT CGTGCACAAT ATCCTTTACT TTCTGATGCT GAGAGGGCAA GAAATATTCG CGGAGAACCT GTTTTATTAA TAAGTAACAA GAATGCTAAT TATGAGAGGT TTTCGAAGAA ATTATACTCA AAGGAAAACA ACAACAACAA TGTTGTTGTG AAGTTTCAAC ACTTCAAGAG TGGTTTAAGT GGTATTGTAT CAAAGGACGT TGAAGGTTTC GAATTAAATG GGAAAATTGT ATGTCCGATT CAAGGTGGGT CACTGCCAAA TTTATCTACC ACCTTGATTT TAAAGATGTC CTATAGATTA ATTCCGTTGC CATCGAGAAA TAAGTCTATT ATACTGAACG GGTTCATTCC GTCAGAACCG GTACTAACAG CATATGACCT TGATTCCATA ATGTACAAGT ATAATAACCA AAATTACTCC CGTCGCTGGA ACTTTGGTAA TGATTTGAAG CAAAATATTG TTCCAGTAGG ACCAAAGGGT ATTACTCAGT ACAAACCAAG AACTGGTGGC TATCGAGCAT TCTTTTATTT TGCTGAGCTC AGTAGAAATA ATGTCCAACC CGCCCACAAC TATGGTAGGA ATAGCTACAA CAGTCAACCC GGCTTCAACA ATAGCAGGTA TGATGGTGGA AACAATAATT ACAGACAAAA TTCAAATTAC AGGAACAATA ACTATTCCGG AAATAGAAAT AGTGGACAGT ACAGCGGCAA CAGCTACTCT CGGAATAACA AGCAAAGTCG GTATGACAAT TCAAGAGCAA ATAGGCGTTA G |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq |
NP_014691.1 |
CDS | 1..3021 |
Translation | |
Target ORF information:
RefSeq Version | NM_001183467.1 |
Organism | Saccharomyces cerevisiae S288C |
Definition | Saccharomyces cerevisiae S288C ssRNA exonuclease RAT1 (RAT1), partial mRNA. |
Target ORF information:
Epitope | DYKDDDDK |
Bacterial selection | AMPR |
Mammalian selection | NeoR |
Vector | pcDNA3.1+/C-(K)DYK |
|
NM_001183467.1 |
ORF Insert Sequence:
1 61 121 181 241 301 361 421 481 541 601 661 721 781 841 901 961 1021 1081 1141 1201 1261 1321 1381 1441 1501 1561 1621 1681 1741 1801 1861 1921 1981 2041 2101 2161 2221 2281 2341 2401 2461 2521 2581 2641 2701 2761 2821 2881 2941 3001
| ATGGGTGTTC CGTCATTTTT CAGATGGCTA TCTCGAAAAT ATCCAAAGAT CATATCCCCA GTATTGGAAG AGCAACCTCA GATAGTCGAC GGTGTCATAT TGCCGTTGGA TTATTCCGCC TCAAATCCAA ACGGTGAGTT AGACAACTTG TATTTGGATA TGAATGGTAT TGTTCATCCA TGTTCGCACC CAGAAAACAA ACCGCCTCCA GAGACTGAAG ATGAAATGCT TTTGGCAGTT TTTGAATATA CCAATCGTGT GTTAAATATG GCTAGACCAC GCAAGGTACT TGTTATGGCT GTTGATGGTG TTGCTCCTCG TGCCAAAATG AACCAGCAGA GAGCGCGTAG ATTTAGGAGT GCTAGGGATG CTCAGATTGA AAACGAAGCC AGGGAAGAAA TTATGAGACA GCGAGAAGAA GTTGGTGAGA TAATCGATGA TGCCGTCAGG AACAAGAAAA CTTGGGATTC AAATGCGATC ACTCCAGGCA CCCCATTTAT GGATAAGCTT GCCGCGGCCC TCCGTTATTG GACAGCATTT AAACTGGCCA CTGACCCTGG TTGGAAAAAC CTGCAGGTGA TTATCAGTGA CGCCACCGTC CCAGGTGAAG GTGAGCACAA AATAATGAAT TTCATTAGGT CTCAAAGAGC TGATCCTGAA TATAATCCCA ACACAACGCA CTGTATATAC GGTTTGGATG CTGATTTAAT TTTTTTGGGC CTTGCCACTC ATGAACCACA TTTTAAAATT CTAAGAGAAG ATGTTTTTGC TCAAGACAAT CGGAAAAGAA ATAACTTAAA AGATACTATA AATATGACTG AAGAAGAAAA ACAATTTCTC CAAAAACAAA ATTCCGAACA ACCTTTCTTG TGGCTGCACA TAAATGTTTT GAGGGAATAC TTGTCCGCTG AGTTATGGGT TCCGGGTCTT CCATTTACAT TTGATTTAGA AAGGGCTATC GACGATTGGG TTTTCATGTG CTTTTTCTGT GGTAATGACT TTTTACCACA TTTACCATGC TTAGATGTCA GAGAAAATAG TATTGATATT CTCTTGGATA TTTGGAAGGT AGTACTACCG AAATTGAAAA CGTACATGAC CTGCGACGGT GTCTTGAACC TCCCTTCTGT TGAAACGCTA TTGCAACACC TTGGCTCCCG TGAGGGGGAT ATCTTCAAAA CTAGACATAT TCAAGAAGCC AGAAAGAAAG AAGCTTTTGA AAGAAGGAAA GCGCAGAAAA ATATGTCAAA AGGTCAAGAC AGGCATCCTA CAGTAGCTAC GGAGCAACTG CAAATGTATG ACACACAAGG AAATTTAGCA AAAGGTTCAT GGAACTTGAC CACCAGTGAT ATGGTAAGGT TGAAAAAGGA ACTGATGCTT GCGAACGAGG GGAACGAAGA AGCAATCGCC AAAGTTAAGC AACAGAGTGA TAAGAACAAT GAACTGATGA AAGATATCAG CAAGGAAGAA ATTGATGATG CTGTTAGTAA GGCTAACAAA ACTAATTTTA ACCTTGCAGA AGTTATGAAA CAGAAAATAA TAAATAAGAA ACACCGTCTT GAAAAGGATA ATGAAGAGGA AGAAATTGCT AAGGATAGCA AAAAAGTTAA GACAGAGAAA GCGGAATCAG AGTGCGATCT CGATGCAGAG ATCAAAGATG AGATTGTGGC TGACGTAAAC GACAGGGAAA ACTCTGAAAC TACAGAAGTA TCAAGAGATT CACCAGTCCA CAGCACAGTG AATGTCAGCG AAGGTCCCAA AAATGGGGTC TTTGATACAG ATGAATTTGT CAAACTATTC GAACCTGGTT ACCACGAAAG ATATTACACA GCTAAATTTC ACGTTACTCC TCAAGATATT GAACAGTTAA GAAAAGATAT GGTAAAATGC TATATCGAAG GGGTCGCCTG GGTACTAATG TATTACTATC AAGGTTGTGC CTCTTGGAAT TGGTTCTATC CGTACCATTA TGCTCCTCTG GCAACAGATT TCCATGGGTT TTCTCACTTG GAGATAAAGT TCGAAGAAGG TACTCCATTT TTACCTTACG AACAATTGAT GAGTGTTTTA CCAGCTGCAT CTGGCCATGC TTTGCCAAAA ATTTTCCGGT CTTTGATGTC TGAACCTGAC TCTGAAATCA TTGATTTTTA TCCTGAAGAA TTTCCCATAG ATATGAATGG TAAGAAGATG TCCTGGCAAG GCATAGCGTT GCTACCATTC ATCGATCAGG ATAGACTGTT AACAGCTGTT CGTGCACAAT ATCCTTTACT TTCTGATGCT GAGAGGGCAA GAAATATTCG CGGAGAACCT GTTTTATTAA TAAGTAACAA GAATGCTAAT TATGAGAGGT TTTCGAAGAA ATTATACTCA AAGGAAAACA ACAACAACAA TGTTGTTGTG AAGTTTCAAC ACTTCAAGAG TGGTTTAAGT GGTATTGTAT CAAAGGACGT TGAAGGTTTC GAATTAAATG GGAAAATTGT ATGTCCGATT CAAGGTGGGT CACTGCCAAA TTTATCTACC ACCTTGATTT TAAAGATGTC CTATAGATTA ATTCCGTTGC CATCGAGAAA TAAGTCTATT ATACTGAACG GGTTCATTCC GTCAGAACCG GTACTAACAG CATATGACCT TGATTCCATA ATGTACAAGT ATAATAACCA AAATTACTCC CGTCGCTGGA ACTTTGGTAA TGATTTGAAG CAAAATATTG TTCCAGTAGG ACCAAAGGGT ATTACTCAGT ACAAACCAAG AACTGGTGGC TATCGAGCAT TCTTTTATTT TGCTGAGCTC AGTAGAAATA ATGTCCAACC CGCCCACAAC TATGGTAGGA ATAGCTACAA CAGTCAACCC GGCTTCAACA ATAGCAGGTA TGATGGTGGA AACAATAATT ACAGACAAAA TTCAAATTAC AGGAACAATA ACTATTCCGG AAATAGAAAT AGTGGACAGT ACAGCGGCAA CAGCTACTCT CGGAATAACA AGCAAAGTCG GTATGACAAT TCAAGAGCAA ATAGGCGTTA G |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
 |
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV.
Nature387(6632 Suppl)98-102(1997 May)
Dujon B,Albermann K,Aldea M,Alexandraki D,Ansorge W,Arino J,Benes V,Bohn C,Bolotin-Fukuhara M,Bordonn? R,Boyer J,Camasses A,Casamayor A,Casas C,Ch?ret G,Cziepluch C,Daignan-Fornier B,Dang DV,de Haan M,Delius H,Durand P,Fairhead C,Feldmann H,Gaillon L,Kleine K |
 |
Life with 6000 genes.
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
Goffeau A,Barrell BG,Bussey H,Davis RW,Dujon B,Feldmann H,Galibert F,Hoheisel JD,Jacq C,Johnston M,Louis EJ,Mewes HW,Murakami Y,Philippsen P,Tettelin H,Oliver SG |